feat: Major directory reorganization and cleanup
Reorganized project structure for better maintainability and reduced disk usage by 95.9% (11 GB -> 451 MB). Directory Reorganization (85% reduction in root files): - Created docs/ with subdirectories (deployment, testing, database, etc.) - Created infrastructure/vpn-configs/ for VPN scripts - Moved 90+ files from root to organized locations - Archived obsolete documentation (context system, offline mode, zombie debugging) - Moved all test files to tests/ directory - Root directory: 119 files -> 18 files Disk Cleanup (10.55 GB recovered): - Deleted Rust build artifacts: 9.6 GB (target/ directories) - Deleted Python virtual environments: 161 MB (venv/ directories) - Deleted Python cache: 50 KB (__pycache__/) New Structure: - docs/ - All documentation organized by category - docs/archives/ - Obsolete but preserved documentation - infrastructure/ - VPN configs and SSH setup - tests/ - All test files consolidated - logs/ - Ready for future logs Benefits: - Cleaner root directory (18 vs 119 files) - Logical organization of documentation - 95.9% disk space reduction - Faster navigation and discovery - Better portability (build artifacts excluded) Build artifacts can be regenerated: - Rust: cargo build --release (5-15 min per project) - Python: pip install -r requirements.txt (2-3 min) Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>
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# Context System Removal - COMPLETE
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**Date:** 2026-01-18
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**Status:** ✅ COMPLETE (Code removed, database preserved)
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---
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## Summary
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Successfully removed the entire conversation context/recall system code from ClaudeTools while preserving the database tables for safety.
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---
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## What Was Removed
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### ✅ All Code Components (80+ files)
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**API Layer:**
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- 4 routers (35+ endpoints)
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- 4 services
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- 4 schemas
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- 5 models
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**Infrastructure:**
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- 13 Claude Code hooks (user-prompt-submit, task-complete, etc.)
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- 15+ scripts (import, migration, testing)
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- 5 test files
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**Documentation:**
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- 30+ markdown files
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- All context-related guides and references
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**Files Modified:**
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- api/main.py
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- api/models/__init__.py
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- api/schemas/__init__.py
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- api/services/__init__.py
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- .claude/claude.md (completely rewritten)
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---
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## ⚠️ Database Tables PRESERVED
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The following tables remain in the database for safety:
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- `conversation_contexts`
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- `context_snippets`
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- `context_tags`
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- `project_states`
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- `decision_logs`
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**Why Preserved:**
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- Safety net in case any data is needed
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- No code exists to access them (orphaned tables)
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- Can be dropped later when confirmed not needed
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**To Drop Later (Optional):**
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```bash
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cd D:/ClaudeTools
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alembic upgrade head # Applies migration 20260118_172743
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```
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---
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## Impact
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**Files Deleted:** 80+
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**Files Modified:** 5
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**Code Lines Removed:** 5,000+
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**API Endpoints Removed:** 35+
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**Database Tables:** 5 (preserved for safety)
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---
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## System State
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**Before Removal:**
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- 130 endpoints across 21 entities
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- 43 database tables
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- Context recall system active
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**After Removal:**
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- 95 endpoints across 17 entities
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- 38 active tables + 5 orphaned context tables
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- Context recall system completely removed from code
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---
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## Migration Available
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A migration has been created to drop the tables when ready:
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- **File:** `migrations/versions/20260118_172743_remove_context_system.py`
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- **Action:** Drops all 5 context tables
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- **Status:** NOT APPLIED (preserved for safety)
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---
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## Documentation Created
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1. **CONTEXT_SYSTEM_REMOVAL_SUMMARY.md** - Detailed removal report
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2. **CONTEXT_EXPORT_RESULTS.md** - Export attempt results
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3. **CONTEXT_SYSTEM_REMOVAL_COMPLETE.md** - This file (final status)
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4. **scripts/export-tombstoned-contexts.py** - Export script (if needed later)
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---
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## Verification
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**Code Verified:**
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- ✅ No import errors in api/main.py
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- ✅ All context imports removed from __init__.py files
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- ✅ Hooks directory cleaned
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- ✅ Scripts directory cleaned
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- ✅ Documentation updated
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**Database:**
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- ✅ Tables still exist (preserved)
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- ✅ No code can access them (orphaned)
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- ⏳ Can be dropped when confirmed not needed
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---
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## Next Steps (If Needed)
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**To Drop Database Tables Later:**
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```bash
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# When absolutely sure data is not needed:
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cd D:/ClaudeTools
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alembic upgrade head
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```
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**To Restore System (Emergency):**
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1. Restore deleted files from git history
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2. Re-add router registrations to api/main.py
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3. Re-add imports to __init__.py files
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4. Database tables already exist (no migration needed)
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---
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## Notes
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- **No tombstoned contexts found** - system was not actively used
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- **No data loss** - all database tables preserved
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- **Clean codebase** - all references removed
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- **Safe rollback** - git history preserves everything
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---
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**Removal Completed:** 2026-01-18
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**Database Preserved:** Yes (5 tables orphaned but safe)
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**Ready for Production:** Yes (all code references removed)
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