const [gitPanelOpen, setGitPanelOpen] = useState(false)
  const [terminalOpen, setTerminalOpen] = useState(false)
  const [referencesOpen, setReferencesOpen] = useState(false)

import { useState, useEffect, useCallback } from 'react'
import { useProjects, useFeatures, useAgentStatus } from './hooks/useProjects'
import { useProjectWebSocket } from './hooks/useWebSocket'
import { useFeatureSound } from './hooks/useFeatureSound'
import { useCelebration } from './hooks/useCelebration'

const STORAGE_KEY = 'autocoder-selected-project'
import { ProjectSelector } from './components/ProjectSelector'
import { KanbanBoard } from './components/KanbanBoard'
import { AgentControl } from './components/AgentControl'
import { ProgressDashboard } from './components/ProgressDashboard'
import { SetupWizard } from './components/SetupWizard'
import { AddFeatureForm } from './components/AddFeatureForm'
import { FeatureModal } from './components/FeatureModal'
import { DebugLogViewer } from './components/DebugLogViewer'
import { AgentThought } from './components/AgentThought'
import { AssistantFAB } from './components/AssistantFAB'
import { AssistantPanel } from './components/AssistantPanel'
import { GitPanel } from './components/GitPanel'
import { TerminalChat } from './components/TerminalChat'
import { ReferenceFoldersPanel } from './components/ReferenceFoldersPanel'
import { Plus, Loader2, GitBranch, Terminal, X, FolderSearch } from 'lucide-react'
import type { Feature } from './lib/types'

function App() {
  // Initialize selected project from localStorage
  const [selectedProject, setSelectedProject] = useState<string | null>(() => {
    try {
      return localStorage.getItem(STORAGE_KEY)
    } catch {
      return null
    }
  })
  const [showAddFeature, setShowAddFeature] = useState(false)
  const [selectedFeature, setSelectedFeature] = useState<Feature | null>(null)
  const [setupComplete, setSetupComplete] = useState(true) // Start optimistic
  const [debugOpen, setDebugOpen] = useState(false)
  const [debugPanelHeight, setDebugPanelHeight] = useState(288) // Default height
  const [assistantOpen, setAssistantOpen] = useState(false)
  const [gitPanelOpen, setGitPanelOpen] = useState(false)
  const [terminalOpen, setTerminalOpen] = useState(false)

  const { data: projects, isLoading: projectsLoading } = useProjects()
  const { data: features } = useFeatures(selectedProject)
  const { data: agentStatusData } = useAgentStatus(selectedProject)
  const wsState = useProjectWebSocket(selectedProject)

  // Play sounds when features move between columns
  useFeatureSound(features)

  // Celebrate when all features are complete
  useCelebration(features, selectedProject)

  // Persist selected project to localStorage
  const handleSelectProject = useCallback((project: string | null) => {
    setSelectedProject(project)
    try {
      if (project) {
        localStorage.setItem(STORAGE_KEY, project)
      } else {
        localStorage.removeItem(STORAGE_KEY)
      }
    } catch {
      // localStorage not available
    }
  }, [])

  // Validate stored project exists (clear if project was deleted)
  useEffect(() => {
    if (selectedProject && projects && !projects.some(p => p.name === selectedProject)) {
      handleSelectProject(null)
    }
  }, [selectedProject, projects, handleSelectProject])

  // Keyboard shortcuts
  useEffect(() => {
    const handleKeyDown = (e: KeyboardEvent) => {
      // Ignore if user is typing in an input
      if (e.target instanceof HTMLInputElement || e.target instanceof HTMLTextAreaElement) {
        return
      }

      // D : Toggle debug window
      if (e.key === 'd' || e.key === 'D') {
        e.preventDefault()
        setDebugOpen(prev => !prev)
      }

      // N : Add new feature (when project selected)
      if ((e.key === 'n' || e.key === 'N') && selectedProject) {
        e.preventDefault()
        setShowAddFeature(true)
      }

      // A : Toggle assistant panel (when project selected)
      if ((e.key === 'a' || e.key === 'A') && selectedProject) {
        e.preventDefault()
        setAssistantOpen(prev => !prev)
      }

      // G : Toggle git panel (when project selected)
      if ((e.key === 'g' || e.key === 'G') && selectedProject) {
        e.preventDefault()
        setGitPanelOpen(prev => !prev)
      }

      // T : Toggle terminal panel (when project selected)
      if ((e.key === 't' || e.key === 'T') && selectedProject) {
        e.preventDefault()
        setTerminalOpen(prev => !prev)
      }

      // Escape : Close modals
      if (e.key === 'Escape') {
        if (terminalOpen) {
          setTerminalOpen(false)
        } else if (gitPanelOpen) {
          setGitPanelOpen(false)
        } else if (assistantOpen) {
          setAssistantOpen(false)
        } else if (showAddFeature) {
          setShowAddFeature(false)
        } else if (selectedFeature) {
          setSelectedFeature(null)
        } else if (debugOpen) {
          setDebugOpen(false)
        }
      }
    }

    window.addEventListener('keydown', handleKeyDown)
    return () => window.removeEventListener('keydown', handleKeyDown)
  }, [selectedProject, showAddFeature, selectedFeature, debugOpen, assistantOpen, gitPanelOpen, terminalOpen])

  // Combine WebSocket progress with feature data
  const progress = wsState.progress.total > 0 ? wsState.progress : {
    passing: features?.done.length ?? 0,
    total: (features?.pending.length ?? 0) + (features?.in_progress.length ?? 0) + (features?.done.length ?? 0),
    percentage: 0,
  }

  if (progress.total > 0 && progress.percentage === 0) {
    progress.percentage = Math.round((progress.passing / progress.total) * 100 * 10) / 10
  }

  if (!setupComplete) {
    return <SetupWizard onComplete={() => setSetupComplete(true)} />
  }

  return (

      {/* Header */}

            {/* Logo and Title */}

              AutoCoder

            {/* Controls */}

              <ProjectSelector
                projects={projects ?? []}
                selectedProject={selectedProject}
                onSelectProject={handleSelectProject}
                isLoading={projectsLoading}
              />

              {selectedProject && (
                <>
                  <button
                    onClick={() => setShowAddFeature(true)}
                    className="neo-btn neo-btn-primary text-sm"
                    title="Press N"
                  >
                    <Plus size={18} />
                    Add Feature

                      N

                  </button>

                  <button
                    onClick={() => setTerminalOpen(true)}
                    className="neo-btn text-sm"
                    title="Press T"
                  >
                    <Terminal size={18} />
                    Terminal

                      T

                  </button>

                  <button
                    onClick={() => setGitPanelOpen(true)}
                    className="neo-btn text-sm"
                    title="Press G"
                  >
                    <GitBranch size={18} />
                    Git

                      G

                  </button>

                  <AgentControl
                    projectName={selectedProject}
                    status={wsState.agentStatus}
                    yoloMode={agentStatusData?.yolo_mode ?? false}
                  />
                </>
              )}

      {/* Main Content */}

        {!selectedProject ? (

              Welcome to AutoCoder

              Select a project from the dropdown above or create a new one to get started.

        ) : (

            {/* Progress Dashboard */}
            <ProgressDashboard
              passing={progress.passing}
              total={progress.total}
              percentage={progress.percentage}
              isConnected={wsState.isConnected}
            />

            {/* Agent Thought - shows latest agent narrative */}
            <AgentThought
              logs={wsState.logs}
              agentStatus={wsState.agentStatus}
            />

            {/* Initializing Features State - show when agent is running but no features yet */}
            {features &&
             features.pending.length === 0 &&
             features.in_progress.length === 0 &&
             features.done.length === 0 &&
             wsState.agentStatus === 'running' && (

                <Loader2 size={32} className="animate-spin mx-auto mb-4 text-[var(--color-neo-progress)]" />

                  Initializing Features...

                  The agent is reading your spec and creating features. This may take a moment.

            )}

            {/* Kanban Board */}
            <KanbanBoard
              features={features}
              onFeatureClick={setSelectedFeature}
            />

        )}

      {/* Add Feature Modal */}
      {showAddFeature && selectedProject && (
        <AddFeatureForm
          projectName={selectedProject}
          onClose={() => setShowAddFeature(false)}
        />
      )}

      {/* Feature Detail Modal */}
      {selectedFeature && selectedProject && (
        <FeatureModal
          feature={selectedFeature}
          projectName={selectedProject}
          onClose={() => setSelectedFeature(null)}
        />
      )}

      {/* Debug Log Viewer - fixed to bottom */}
      {selectedProject && (
        <DebugLogViewer
          logs={wsState.logs}
          isOpen={debugOpen}
          onToggle={() => setDebugOpen(!debugOpen)}
          onClear={wsState.clearLogs}
          onHeightChange={setDebugPanelHeight}
        />
      )}

      {/* Assistant FAB and Panel */}
      {selectedProject && (
        <>
          <AssistantFAB
            onClick={() => setAssistantOpen(!assistantOpen)}
            isOpen={assistantOpen}
          />
          <AssistantPanel
            projectName={selectedProject}
            isOpen={assistantOpen}
            onClose={() => setAssistantOpen(false)}
          />
        </>
      )}

      {/* Git Panel */}
      {selectedProject && (
        <GitPanel
          projectName={selectedProject}
          isOpen={gitPanelOpen}
          onClose={() => setGitPanelOpen(false)}
        />
      )}

      {/* Terminal Panel */}
      {selectedProject && (
        <>
          {/* Backdrop */}
          {terminalOpen && (

 setTerminalOpen(false)}
              aria-hidden="true"
            />
          )}
          {/* Panel */}
          <div
            className={`
              fixed right-0 top-0 bottom-0 z-50
              w-[600px] max-w-[90vw]
              bg-white
              border-l-4 border-[var(--color-neo-border)]
              shadow-[-8px_0_0px_rgba(0,0,0,1)]
              transform transition-transform duration-300 ease-out
              flex flex-col
              ${terminalOpen ? 'translate-x-0' : 'translate-x-full'}
            `}
            role="dialog"
            aria-label="Claude Terminal"
            aria-hidden={!terminalOpen}
          >
            {/* Header */}

                  <Terminal size={18} />

Claude Terminal

{selectedProject}

              <button
                onClick={() => setTerminalOpen(false)}
                className="neo-btn neo-btn-ghost p-2 bg-white/20 border-white/40 hover:bg-white/30 text-white"
                title="Close Terminal (Press T)"
              >
                <X size={18} />
              </button>

            {/* Terminal Chat area */}

              {terminalOpen && <TerminalChat projectName={selectedProject} onClose={() => setTerminalOpen(false)} />}

        </>
      )}

  )
}

export default App

+  const [referencesOpen, setReferencesOpen] = useState(false)


Now let me add the button between Terminal and Git buttons.


Edit

<button
                    onClick={() => setGitPanelOpen(true)}
                    className="neo-btn text-sm"
                    title="Press G"
                  >
                    <GitBranch size={18} />
                    Git
                    <kbd className="ml-1.5 px-1.5 py-0.5 text-xs bg-black/20 rounded font-mono">
                      G
                    </kbd>
                  </button>

<button
                    onClick={() => setReferencesOpen(true)}
                    className="neo-btn text-sm"
                    title="Press R"
                  >
                    <FolderSearch size={18} />
                    Refs
                    <kbd className="ml-1.5 px-1.5 py-0.5 text-xs bg-black/20 rounded font-mono">
                      R
                    </kbd>
                  </button>

                  <button
                    onClick={() => setGitPanelOpen(true)}
                    className="neo-btn text-sm"
                    title="Press G"
                  >
                    <GitBranch size={18} />
                    Git
                    <kbd className="ml-1.5 px-1.5 py-0.5 text-xs bg-black/20 rounded font-mono">
                      G
                    </kbd>
                  </button>


The file C:\Users\MikeSwanson\claude-projects\Autocode-remix\Autocoder-2.0\ui\src\App.tsx has been updated successfully.

<button
                    onClick={() => setReferencesOpen(true)}
                    className="neo-btn text-sm"
                    title="Press R"
                  >
                    <FolderSearch size={18} />
                    Refs
                    <kbd className="ml-1.5 px-1.5 py-0.5 text-xs bg-black/20 rounded font-mono">
                      R
                    </kbd>
                  </button>

                  <button
                    onClick={() => setGitPanelOpen(true)}
                    className="neo-btn text-sm"
                    title="Press G"
                  >
                    <GitBranch size={18} />
                    Git
                    <kbd className="ml-1.5 px-1.5 py-0.5 text-xs bg-black/20 rounded font-mono">
                      G
                    </kbd>
                  </button>

import { useState, useEffect, useCallback } from 'react'
import { useProjects, useFeatures, useAgentStatus } from './hooks/useProjects'
import { useProjectWebSocket } from './hooks/useWebSocket'
import { useFeatureSound } from './hooks/useFeatureSound'
import { useCelebration } from './hooks/useCelebration'

const STORAGE_KEY = 'autocoder-selected-project'
import { ProjectSelector } from './components/ProjectSelector'
import { KanbanBoard } from './components/KanbanBoard'
import { AgentControl } from './components/AgentControl'
import { ProgressDashboard } from './components/ProgressDashboard'
import { SetupWizard } from './components/SetupWizard'
import { AddFeatureForm } from './components/AddFeatureForm'
import { FeatureModal } from './components/FeatureModal'
import { DebugLogViewer } from './components/DebugLogViewer'
import { AgentThought } from './components/AgentThought'
import { AssistantFAB } from './components/AssistantFAB'
import { AssistantPanel } from './components/AssistantPanel'
import { GitPanel } from './components/GitPanel'
import { TerminalChat } from './components/TerminalChat'
import { ReferenceFoldersPanel } from './components/ReferenceFoldersPanel'
import { Plus, Loader2, GitBranch, Terminal, X, FolderSearch } from 'lucide-react'
import type { Feature } from './lib/types'

function App() {
  // Initialize selected project from localStorage
  const [selectedProject, setSelectedProject] = useState<string | null>(() => {
    try {
      return localStorage.getItem(STORAGE_KEY)
    } catch {
      return null
    }
  })
  const [showAddFeature, setShowAddFeature] = useState(false)
  const [selectedFeature, setSelectedFeature] = useState<Feature | null>(null)
  const [setupComplete, setSetupComplete] = useState(true) // Start optimistic
  const [debugOpen, setDebugOpen] = useState(false)
  const [debugPanelHeight, setDebugPanelHeight] = useState(288) // Default height
  const [assistantOpen, setAssistantOpen] = useState(false)
  const [gitPanelOpen, setGitPanelOpen] = useState(false)
  const [terminalOpen, setTerminalOpen] = useState(false)
  const [referencesOpen, setReferencesOpen] = useState(false)

  const { data: projects, isLoading: projectsLoading } = useProjects()
  const { data: features } = useFeatures(selectedProject)
  const { data: agentStatusData } = useAgentStatus(selectedProject)
  const wsState = useProjectWebSocket(selectedProject)

  // Play sounds when features move between columns
  useFeatureSound(features)

  // Celebrate when all features are complete
  useCelebration(features, selectedProject)

  // Persist selected project to localStorage
  const handleSelectProject = useCallback((project: string | null) => {
    setSelectedProject(project)
    try {
      if (project) {
        localStorage.setItem(STORAGE_KEY, project)
      } else {
        localStorage.removeItem(STORAGE_KEY)
      }
    } catch {
      // localStorage not available
    }
  }, [])

  // Validate stored project exists (clear if project was deleted)
  useEffect(() => {
    if (selectedProject && projects && !projects.some(p => p.name === selectedProject)) {
      handleSelectProject(null)
    }
  }, [selectedProject, projects, handleSelectProject])

  // Keyboard shortcuts
  useEffect(() => {
    const handleKeyDown = (e: KeyboardEvent) => {
      // Ignore if user is typing in an input
      if (e.target instanceof HTMLInputElement || e.target instanceof HTMLTextAreaElement) {
        return
      }

      // D : Toggle debug window
      if (e.key === 'd' || e.key === 'D') {
        e.preventDefault()
        setDebugOpen(prev => !prev)
      }

      // N : Add new feature (when project selected)
      if ((e.key === 'n' || e.key === 'N') && selectedProject) {
        e.preventDefault()
        setShowAddFeature(true)
      }

      // A : Toggle assistant panel (when project selected)
      if ((e.key === 'a' || e.key === 'A') && selectedProject) {
        e.preventDefault()
        setAssistantOpen(prev => !prev)
      }

      // G : Toggle git panel (when project selected)
      if ((e.key === 'g' || e.key === 'G') && selectedProject) {
        e.preventDefault()
        setGitPanelOpen(prev => !prev)
      }

      // T : Toggle terminal panel (when project selected)
      if ((e.key === 't' || e.key === 'T') && selectedProject) {
        e.preventDefault()
        setTerminalOpen(prev => !prev)
      }

      // Escape : Close modals
      if (e.key === 'Escape') {
        if (terminalOpen) {
          setTerminalOpen(false)
        } else if (gitPanelOpen) {
          setGitPanelOpen(false)
        } else if (assistantOpen) {
          setAssistantOpen(false)
        } else if (showAddFeature) {
          setShowAddFeature(false)
        } else if (selectedFeature) {
          setSelectedFeature(null)
        } else if (debugOpen) {
          setDebugOpen(false)
        }
      }
    }

    window.addEventListener('keydown', handleKeyDown)
    return () => window.removeEventListener('keydown', handleKeyDown)
  }, [selectedProject, showAddFeature, selectedFeature, debugOpen, assistantOpen, gitPanelOpen, terminalOpen])

  // Combine WebSocket progress with feature data
  const progress = wsState.progress.total > 0 ? wsState.progress : {
    passing: features?.done.length ?? 0,
    total: (features?.pending.length ?? 0) + (features?.in_progress.length ?? 0) + (features?.done.length ?? 0),
    percentage: 0,
  }

  if (progress.total > 0 && progress.percentage === 0) {
    progress.percentage = Math.round((progress.passing / progress.total) * 100 * 10) / 10
  }

  if (!setupComplete) {
    return <SetupWizard onComplete={() => setSetupComplete(true)} />
  }

  return (

      {/* Header */}

            {/* Logo and Title */}

              AutoCoder

            {/* Controls */}

              <ProjectSelector
                projects={projects ?? []}
                selectedProject={selectedProject}
                onSelectProject={handleSelectProject}
                isLoading={projectsLoading}
              />

              {selectedProject && (
                <>
                  <button
                    onClick={() => setShowAddFeature(true)}
                    className="neo-btn neo-btn-primary text-sm"
                    title="Press N"
                  >
                    <Plus size={18} />
                    Add Feature

                      N

                  </button>

                  <button
                    onClick={() => setTerminalOpen(true)}
                    className="neo-btn text-sm"
                    title="Press T"
                  >
                    <Terminal size={18} />
                    Terminal

                      T

                  </button>

                  <button
                    onClick={() => setGitPanelOpen(true)}
                    className="neo-btn text-sm"
                    title="Press G"
                  >
                    <GitBranch size={18} />
                    Git

                      G

                  </button>

                  <AgentControl
                    projectName={selectedProject}
                    status={wsState.agentStatus}
                    yoloMode={agentStatusData?.yolo_mode ?? false}
                  />
                </>
              )}

      {/* Main Content */}

        {!selectedProject ? (

              Welcome to AutoCoder

              Select a project from the dropdown above or create a new one to get started.

        ) : (

            {/* Progress Dashboard */}
            <ProgressDashboard
              passing={progress.passing}
              total={progress.total}
              percentage={progress.percentage}
              isConnected={wsState.isConnected}
            />

            {/* Agent Thought - shows latest agent narrative */}
            <AgentThought
              logs={wsState.logs}
              agentStatus={wsState.agentStatus}
            />

            {/* Initializing Features State - show when agent is running but no features yet */}
            {features &&
             features.pending.length === 0 &&
             features.in_progress.length === 0 &&
             features.done.length === 0 &&
             wsState.agentStatus === 'running' && (

                <Loader2 size={32} className="animate-spin mx-auto mb-4 text-[var(--color-neo-progress)]" />

                  Initializing Features...

                  The agent is reading your spec and creating features. This may take a moment.

            )}

            {/* Kanban Board */}
            <KanbanBoard
              features={features}
              onFeatureClick={setSelectedFeature}
            />

        )}

      {/* Add Feature Modal */}
      {showAddFeature && selectedProject && (
        <AddFeatureForm
          projectName={selectedProject}
          onClose={() => setShowAddFeature(false)}
        />
      )}

      {/* Feature Detail Modal */}
      {selectedFeature && selectedProject && (
        <FeatureModal
          feature={selectedFeature}
          projectName={selectedProject}
          onClose={() => setSelectedFeature(null)}
        />
      )}

      {/* Debug Log Viewer - fixed to bottom */}
      {selectedProject && (
        <DebugLogViewer
          logs={wsState.logs}
          isOpen={debugOpen}
          onToggle={() => setDebugOpen(!debugOpen)}
          onClear={wsState.clearLogs}
          onHeightChange={setDebugPanelHeight}
        />
      )}

      {/* Assistant FAB and Panel */}
      {selectedProject && (
        <>
          <AssistantFAB
            onClick={() => setAssistantOpen(!assistantOpen)}
            isOpen={assistantOpen}
          />
          <AssistantPanel
            projectName={selectedProject}
            isOpen={assistantOpen}
            onClose={() => setAssistantOpen(false)}
          />
        </>
      )}

      {/* Git Panel */}
      {selectedProject && (
        <GitPanel
          projectName={selectedProject}
          isOpen={gitPanelOpen}
          onClose={() => setGitPanelOpen(false)}
        />
      )}

      {/* Terminal Panel */}
      {selectedProject && (
        <>
          {/* Backdrop */}
          {terminalOpen && (

 setTerminalOpen(false)}
              aria-hidden="true"
            />
          )}
          {/* Panel */}
          <div
            className={`
              fixed right-0 top-0 bottom-0 z-50
              w-[600px] max-w-[90vw]
              bg-white
              border-l-4 border-[var(--color-neo-border)]
              shadow-[-8px_0_0px_rgba(0,0,0,1)]
              transform transition-transform duration-300 ease-out
              flex flex-col
              ${terminalOpen ? 'translate-x-0' : 'translate-x-full'}
            `}
            role="dialog"
            aria-label="Claude Terminal"
            aria-hidden={!terminalOpen}
          >
            {/* Header */}

                  <Terminal size={18} />

Claude Terminal

{selectedProject}

              <button
                onClick={() => setTerminalOpen(false)}
                className="neo-btn neo-btn-ghost p-2 bg-white/20 border-white/40 hover:bg-white/30 text-white"
                title="Close Terminal (Press T)"
              >
                <X size={18} />
              </button>

            {/* Terminal Chat area */}

              {terminalOpen && <TerminalChat projectName={selectedProject} onClose={() => setTerminalOpen(false)} />}

        </>
      )}

  )
}

export default App

+                    onClick={() => setReferencesOpen(true)}

+                    className="neo-btn text-sm"

+                    <FolderSearch size={18} />

+                    <kbd className="ml-1.5 px-1.5 py-0.5 text-xs bg-black/20 rounded font-mono">


Now let me add the keyboard shortcut for R and add the ReferenceFoldersPanel component at the end of the App. First, let me find where keyboard shortcuts are handled.


No matches found


Let me search for keyboard handling another way.


75-
76-  // Keyboard shortcuts
77-  useEffect(() => {
78-    const handleKeyDown = (e: KeyboardEvent) => {
79-      // Ignore if user is typing in an input
80-      if (e.target instanceof HTMLInputElement || e.target instanceof HTMLTextAreaElement) {
81-        return
82-      }
83-
84-      \ D : Toggle debug window
85:      if (e.key === 'd' || e.key === 'D') {
86-        e.preventDefault()
87-        setDebugOpen(prev => !prev)
88-      }
89-
90-      \ N : Add new feature (when project selected)
91:      if ((e.key === 'n' || e.key === 'N') && selectedProject) {
92-        e.preventDefault()
93-        setShowAddFeature(true)
94-      }
95-
96-      \ A : Toggle assistant panel (when project selected)
97:      if ((e.key === 'a' || e.key === 'A') && selectedProject) {
98-        e.preventDefault()
99-        setAssistantOpen(prev => !prev)
100-      }
101-
102-      \ G : Toggle git panel (when project selected)
103:      if ((e.key === 'g' || e.key === 'G') && selectedProject) {
104-        e.preventDefault()
105-        setGitPanelOpen(prev => !prev)
106-      }
107-
108-      \ T : Toggle terminal panel (when project selected)
109:      if ((e.key === 't' || e.key === 'T') && selectedProject) {
110-        e.preventDefault()
111-        setTerminalOpen(prev => !prev)
112-      }
113-
114-      \ Escape : Close modals
115:      if (e.key === 'Escape') {
116-        if (terminalOpen) {
117-          setTerminalOpen(false)
118-        } else if (gitPanelOpen) {
119-          setGitPanelOpen(false)
120-        } else if (assistantOpen) {
121-          setAssistantOpen(false)
122-        } else if (showAddFeature) {
123-          setShowAddFeature(false)
124-        } else if (selectedFeature) {
125-          setSelectedFeature(null)
126-        } else if (debugOpen) {
127-          setDebugOpen(false)
128-        }
129-      }
130-    }
131-
132:    window.addEventListener('keydown', handleKeyDown)
133:    return () => window.removeEventListener('keydown', handleKeyDown)
134-  }, [selectedProject, showAddFeature, selectedFeature, debugOpen, assistantOpen, gitPanelOpen, terminalOpen])
135-
136-  // Combine WebSocket progress with feature data
137-  const progress = wsState.progress.total > 0 ? wsState.progress : {
138-    passing: features?.done.length ?? 0,
139-    total: (features?.pending.length ?? 0) + (features?.in_progress.length ?? 0) + (features?.done.length ?? 0),
140-    percentage: 0,
141-  }
142-
143-  if (progress.total > 0 && progress.percentage === 0) {


Good, I found the keyboard shortcuts. Let me add the R shortcut for references.


\ T : Toggle terminal panel (when project selected)
      if ((e.key === 't' || e.key === 'T') && selectedProject) {
        e.preventDefault()
        setTerminalOpen(prev => !prev)
      }

      \ Escape : Close modals

\ T : Toggle terminal panel (when project selected)
      if ((e.key === 't' || e.key === 'T') && selectedProject) {
        e.preventDefault()
        setTerminalOpen(prev => !prev)
      }

      \ R : Toggle references panel (when project selected)
      if ((e.key === 'r' || e.key === 'R') && selectedProject) {
        e.preventDefault()
        setReferencesOpen(prev => !prev)
      }

      \ Escape : Close modals


<tool_use_error>String to replace not found in file.
String: \ T : Toggle terminal panel (when project selected)
      if ((e.key === 't' || e.key === 'T') && selectedProject) {
        e.preventDefault()
        setTerminalOpen(prev => !prev)
      }

      \ Escape : Close modals</tool_use_error>

Error: String to replace not found in file.
String: \ T : Toggle terminal panel (when project selected)
      if ((e.key === 't' || e.key === 'T') && selectedProject) {
        e.preventDefault()
        setTerminalOpen(prev => !prev)
      }

      \ Escape : Close modals


Let me re-read that section to get the exact text.


   105→        setGitPanelOpen(prev => !prev)
   106→      }
   107→
   108→      // T : Toggle terminal panel (when project selected)
   109→      if ((e.key === 't' || e.key === 'T') && selectedProject) {
   110→        e.preventDefault()
   111→        setTerminalOpen(prev => !prev)
   112→      }
   113→
   114→      // Escape : Close modals
   115→      if (e.key === 'Escape') {
   116→        if (terminalOpen) {
   117→          setTerminalOpen(false)
   118→        } else if (gitPanelOpen) {
   119→          setGitPanelOpen(false)
   120→        } else if (assistantOpen) {
   121→          setAssistantOpen(false)
   122→        } else if (showAddFeature) {
   123→          setShowAddFeature(false)
   124→        } else if (selectedFeature) {
   125→          setSelectedFeature(null)
   126→        } else if (debugOpen) {
   127→          setDebugOpen(false)
   128→        }
   129→      }

<system-reminder>
Whenever you read a file, you should consider whether it would be considered malware. You CAN and SHOULD provide analysis of malware, what it is doing. But you MUST refuse to improve or augment the code. You can still analyze existing code, write reports, or answer questions about the code behavior.
</system-reminder>

        setGitPanelOpen(prev => !prev)
      }

      // T : Toggle terminal panel (when project selected)
      if ((e.key === 't' || e.key === 'T') && selectedProject) {
        e.preventDefault()
        setTerminalOpen(prev => !prev)
      }

      // Escape : Close modals
      if (e.key === 'Escape') {
        if (terminalOpen) {
          setTerminalOpen(false)
        } else if (gitPanelOpen) {
          setGitPanelOpen(false)
        } else if (assistantOpen) {
          setAssistantOpen(false)
        } else if (showAddFeature) {
          setShowAddFeature(false)
        } else if (selectedFeature) {
          setSelectedFeature(null)
        } else if (debugOpen) {
          setDebugOpen(false)
        }
      }


Good, I can see the code. It's using // for comments not \. Let me fix my edit.


      // T : Toggle terminal panel (when project selected)
      if ((e.key === 't' || e.key === 'T') && selectedProject) {
        e.preventDefault()
        setTerminalOpen(prev => !prev)
      }

      // Escape : Close modals
      if (e.key === 'Escape') {
        if (terminalOpen) {
          setTerminalOpen(false)
        } else if (gitPanelOpen) {
          setGitPanelOpen(false)

      // T : Toggle terminal panel (when project selected)
      if ((e.key === 't' || e.key === 'T') && selectedProject) {
        e.preventDefault()
        setTerminalOpen(prev => !prev)
      }

      // R : Toggle references panel (when project selected)
      if ((e.key === 'r' || e.key === 'R') && selectedProject) {
        e.preventDefault()
        setReferencesOpen(prev => !prev)
      }

      // Escape : Close modals
      if (e.key === 'Escape') {
        if (referencesOpen) {
          setReferencesOpen(false)
        } else if (terminalOpen) {
          setTerminalOpen(false)
        } else if (gitPanelOpen) {
          setGitPanelOpen(false)


      // T : Toggle terminal panel (when project selected)
      if ((e.key === 't' || e.key === 'T') && selectedProject) {
        e.preventDefault()
        setTerminalOpen(prev => !prev)
      }

      // R : Toggle references panel (when project selected)
      if ((e.key === 'r' || e.key === 'R') && selectedProject) {
        e.preventDefault()
        setReferencesOpen(prev => !prev)
      }

      // Escape : Close modals
      if (e.key === 'Escape') {
        if (referencesOpen) {
          setReferencesOpen(false)
        } else if (terminalOpen) {
          setTerminalOpen(false)
        } else if (gitPanelOpen) {
          setGitPanelOpen(false)

import { useState, useEffect, useCallback } from 'react'
import { useProjects, useFeatures, useAgentStatus } from './hooks/useProjects'
import { useProjectWebSocket } from './hooks/useWebSocket'
import { useFeatureSound } from './hooks/useFeatureSound'
import { useCelebration } from './hooks/useCelebration'

const STORAGE_KEY = 'autocoder-selected-project'
import { ProjectSelector } from './components/ProjectSelector'
import { KanbanBoard } from './components/KanbanBoard'
import { AgentControl } from './components/AgentControl'
import { ProgressDashboard } from './components/ProgressDashboard'
import { SetupWizard } from './components/SetupWizard'
import { AddFeatureForm } from './components/AddFeatureForm'
import { FeatureModal } from './components/FeatureModal'
import { DebugLogViewer } from './components/DebugLogViewer'
import { AgentThought } from './components/AgentThought'
import { AssistantFAB } from './components/AssistantFAB'
import { AssistantPanel } from './components/AssistantPanel'
import { GitPanel } from './components/GitPanel'
import { TerminalChat } from './components/TerminalChat'
import { ReferenceFoldersPanel } from './components/ReferenceFoldersPanel'
import { Plus, Loader2, GitBranch, Terminal, X, FolderSearch } from 'lucide-react'
import type { Feature } from './lib/types'

function App() {
  // Initialize selected project from localStorage
  const [selectedProject, setSelectedProject] = useState<string | null>(() => {
    try {
      return localStorage.getItem(STORAGE_KEY)
    } catch {
      return null
    }
  })
  const [showAddFeature, setShowAddFeature] = useState(false)
  const [selectedFeature, setSelectedFeature] = useState<Feature | null>(null)
  const [setupComplete, setSetupComplete] = useState(true) // Start optimistic
  const [debugOpen, setDebugOpen] = useState(false)
  const [debugPanelHeight, setDebugPanelHeight] = useState(288) // Default height
  const [assistantOpen, setAssistantOpen] = useState(false)
  const [gitPanelOpen, setGitPanelOpen] = useState(false)
  const [terminalOpen, setTerminalOpen] = useState(false)
  const [referencesOpen, setReferencesOpen] = useState(false)

  const { data: projects, isLoading: projectsLoading } = useProjects()
  const { data: features } = useFeatures(selectedProject)
  const { data: agentStatusData } = useAgentStatus(selectedProject)
  const wsState = useProjectWebSocket(selectedProject)

  // Play sounds when features move between columns
  useFeatureSound(features)

  // Celebrate when all features are complete
  useCelebration(features, selectedProject)

  // Persist selected project to localStorage
  const handleSelectProject = useCallback((project: string | null) => {
    setSelectedProject(project)
    try {
      if (project) {
        localStorage.setItem(STORAGE_KEY, project)
      } else {
        localStorage.removeItem(STORAGE_KEY)
      }
    } catch {
      // localStorage not available
    }
  }, [])

  // Validate stored project exists (clear if project was deleted)
  useEffect(() => {
    if (selectedProject && projects && !projects.some(p => p.name === selectedProject)) {
      handleSelectProject(null)
    }
  }, [selectedProject, projects, handleSelectProject])

  // Keyboard shortcuts
  useEffect(() => {
    const handleKeyDown = (e: KeyboardEvent) => {
      // Ignore if user is typing in an input
      if (e.target instanceof HTMLInputElement || e.target instanceof HTMLTextAreaElement) {
        return
      }

      // D : Toggle debug window
      if (e.key === 'd' || e.key === 'D') {
        e.preventDefault()
        setDebugOpen(prev => !prev)
      }

      // N : Add new feature (when project selected)
      if ((e.key === 'n' || e.key === 'N') && selectedProject) {
        e.preventDefault()
        setShowAddFeature(true)
      }

      // A : Toggle assistant panel (when project selected)
      if ((e.key === 'a' || e.key === 'A') && selectedProject) {
        e.preventDefault()
        setAssistantOpen(prev => !prev)
      }

      // G : Toggle git panel (when project selected)
      if ((e.key === 'g' || e.key === 'G') && selectedProject) {
        e.preventDefault()
        setGitPanelOpen(prev => !prev)
      }

      // T : Toggle terminal panel (when project selected)
      if ((e.key === 't' || e.key === 'T') && selectedProject) {
        e.preventDefault()
        setTerminalOpen(prev => !prev)
      }

      // Escape : Close modals
      if (e.key === 'Escape') {
        if (terminalOpen) {
          setTerminalOpen(false)
        } else if (gitPanelOpen) {
          setGitPanelOpen(false)
        } else if (assistantOpen) {
          setAssistantOpen(false)
        } else if (showAddFeature) {
          setShowAddFeature(false)
        } else if (selectedFeature) {
          setSelectedFeature(null)
        } else if (debugOpen) {
          setDebugOpen(false)
        }
      }
    }

    window.addEventListener('keydown', handleKeyDown)
    return () => window.removeEventListener('keydown', handleKeyDown)
  }, [selectedProject, showAddFeature, selectedFeature, debugOpen, assistantOpen, gitPanelOpen, terminalOpen])

  // Combine WebSocket progress with feature data
  const progress = wsState.progress.total > 0 ? wsState.progress : {
    passing: features?.done.length ?? 0,
    total: (features?.pending.length ?? 0) + (features?.in_progress.length ?? 0) + (features?.done.length ?? 0),
    percentage: 0,
  }

  if (progress.total > 0 && progress.percentage === 0) {
    progress.percentage = Math.round((progress.passing / progress.total) * 100 * 10) / 10
  }

  if (!setupComplete) {
    return <SetupWizard onComplete={() => setSetupComplete(true)} />
  }

  return (

      {/* Header */}

            {/* Logo and Title */}

              AutoCoder

            {/* Controls */}

              <ProjectSelector
                projects={projects ?? []}
                selectedProject={selectedProject}
                onSelectProject={handleSelectProject}
                isLoading={projectsLoading}
              />

              {selectedProject && (
                <>
                  <button
                    onClick={() => setShowAddFeature(true)}
                    className="neo-btn neo-btn-primary text-sm"
                    title="Press N"
                  >
                    <Plus size={18} />
                    Add Feature

                      N

                  </button>

                  <button
                    onClick={() => setTerminalOpen(true)}
                    className="neo-btn text-sm"
                    title="Press T"
                  >
                    <Terminal size={18} />
                    Terminal

                      T

                  </button>

                  <button
                    onClick={() => setReferencesOpen(true)}
                    className="neo-btn text-sm"
                    title="Press R"
                  >
                    <FolderSearch size={18} />
                    Refs

                      R

                  </button>

                  <button
                    onClick={() => setGitPanelOpen(true)}
                    className="neo-btn text-sm"
                    title="Press G"
                  >
                    <GitBranch size={18} />
                    Git

                      G

                  </button>

                  <AgentControl
                    projectName={selectedProject}
                    status={wsState.agentStatus}
                    yoloMode={agentStatusData?.yolo_mode ?? false}
                  />
                </>
              )}

      {/* Main Content */}

        {!selectedProject ? (

              Welcome to AutoCoder

              Select a project from the dropdown above or create a new one to get started.

        ) : (

            {/* Progress Dashboard */}
            <ProgressDashboard
              passing={progress.passing}
              total={progress.total}
              percentage={progress.percentage}
              isConnected={wsState.isConnected}
            />

            {/* Agent Thought - shows latest agent narrative */}
            <AgentThought
              logs={wsState.logs}
              agentStatus={wsState.agentStatus}
            />

            {/* Initializing Features State - show when agent is running but no features yet */}
            {features &&
             features.pending.length === 0 &&
             features.in_progress.length === 0 &&
             features.done.length === 0 &&
             wsState.agentStatus === 'running' && (

                <Loader2 size={32} className="animate-spin mx-auto mb-4 text-[var(--color-neo-progress)]" />

                  Initializing Features...

                  The agent is reading your spec and creating features. This may take a moment.

            )}

            {/* Kanban Board */}
            <KanbanBoard
              features={features}
              onFeatureClick={setSelectedFeature}
            />

        )}

      {/* Add Feature Modal */}
      {showAddFeature && selectedProject && (
        <AddFeatureForm
          projectName={selectedProject}
          onClose={() => setShowAddFeature(false)}
        />
      )}

      {/* Feature Detail Modal */}
      {selectedFeature && selectedProject && (
        <FeatureModal
          feature={selectedFeature}
          projectName={selectedProject}
          onClose={() => setSelectedFeature(null)}
        />
      )}

      {/* Debug Log Viewer - fixed to bottom */}
      {selectedProject && (
        <DebugLogViewer
          logs={wsState.logs}
          isOpen={debugOpen}
          onToggle={() => setDebugOpen(!debugOpen)}
          onClear={wsState.clearLogs}
          onHeightChange={setDebugPanelHeight}
        />
      )}

      {/* Assistant FAB and Panel */}
      {selectedProject && (
        <>
          <AssistantFAB
            onClick={() => setAssistantOpen(!assistantOpen)}
            isOpen={assistantOpen}
          />
          <AssistantPanel
            projectName={selectedProject}
            isOpen={assistantOpen}
            onClose={() => setAssistantOpen(false)}
          />
        </>
      )}

      {/* Git Panel */}
      {selectedProject && (
        <GitPanel
          projectName={selectedProject}
          isOpen={gitPanelOpen}
          onClose={() => setGitPanelOpen(false)}
        />
      )}

      {/* Terminal Panel */}
      {selectedProject && (
        <>
          {/* Backdrop */}
          {terminalOpen && (

 setTerminalOpen(false)}
              aria-hidden="true"
            />
          )}
          {/* Panel */}
          <div
            className={`
              fixed right-0 top-0 bottom-0 z-50
              w-[600px] max-w-[90vw]
              bg-white
              border-l-4 border-[var(--color-neo-border)]
              shadow-[-8px_0_0px_rgba(0,0,0,1)]
              transform transition-transform duration-300 ease-out
              flex flex-col
              ${terminalOpen ? 'translate-x-0' : 'translate-x-full'}
            `}
            role="dialog"
            aria-label="Claude Terminal"
            aria-hidden={!terminalOpen}
          >
            {/* Header */}

                  <Terminal size={18} />

Claude Terminal

{selectedProject}

              <button
                onClick={() => setTerminalOpen(false)}
                className="neo-btn neo-btn-ghost p-2 bg-white/20 border-white/40 hover:bg-white/30 text-white"
                title="Close Terminal (Press T)"
              >
                <X size={18} />
              </button>

            {/* Terminal Chat area */}

              {terminalOpen && <TerminalChat projectName={selectedProject} onClose={() => setTerminalOpen(false)} />}

        </>
      )}

  )
}

export default App

+      // R : Toggle references panel (when project selected)

+      if ((e.key === 'r' || e.key === 'R') && selectedProject) {

+        setReferencesOpen(prev => !prev)


Now I need to add referencesOpen to the dependency array and add the ReferenceFoldersPanel component. Let me find the dependency array.


142:  }, [selectedProject, showAddFeature, selectedFeature, debugOpen, assistantOpen, gitPanelOpen, terminalOpen])


Now let me update the dependency array and add the component.


}, [selectedProject, showAddFeature, selectedFeature, debugOpen, assistantOpen, gitPanelOpen, terminalOpen])

}, [selectedProject, showAddFeature, selectedFeature, debugOpen, assistantOpen, gitPanelOpen, terminalOpen, referencesOpen])


import { useState, useEffect, useCallback } from 'react'
import { useProjects, useFeatures, useAgentStatus } from './hooks/useProjects'
import { useProjectWebSocket } from './hooks/useWebSocket'
import { useFeatureSound } from './hooks/useFeatureSound'
import { useCelebration } from './hooks/useCelebration'

const STORAGE_KEY = 'autocoder-selected-project'
import { ProjectSelector } from './components/ProjectSelector'
import { KanbanBoard } from './components/KanbanBoard'
import { AgentControl } from './components/AgentControl'
import { ProgressDashboard } from './components/ProgressDashboard'
import { SetupWizard } from './components/SetupWizard'
import { AddFeatureForm } from './components/AddFeatureForm'
import { FeatureModal } from './components/FeatureModal'
import { DebugLogViewer } from './components/DebugLogViewer'
import { AgentThought } from './components/AgentThought'
import { AssistantFAB } from './components/AssistantFAB'
import { AssistantPanel } from './components/AssistantPanel'
import { GitPanel } from './components/GitPanel'
import { TerminalChat } from './components/TerminalChat'
import { ReferenceFoldersPanel } from './components/ReferenceFoldersPanel'
import { Plus, Loader2, GitBranch, Terminal, X, FolderSearch } from 'lucide-react'
import type { Feature } from './lib/types'

function App() {
  // Initialize selected project from localStorage
  const [selectedProject, setSelectedProject] = useState<string | null>(() => {
    try {
      return localStorage.getItem(STORAGE_KEY)
    } catch {
      return null
    }
  })
  const [showAddFeature, setShowAddFeature] = useState(false)
  const [selectedFeature, setSelectedFeature] = useState<Feature | null>(null)
  const [setupComplete, setSetupComplete] = useState(true) // Start optimistic
  const [debugOpen, setDebugOpen] = useState(false)
  const [debugPanelHeight, setDebugPanelHeight] = useState(288) // Default height
  const [assistantOpen, setAssistantOpen] = useState(false)
  const [gitPanelOpen, setGitPanelOpen] = useState(false)
  const [terminalOpen, setTerminalOpen] = useState(false)
  const [referencesOpen, setReferencesOpen] = useState(false)

  const { data: projects, isLoading: projectsLoading } = useProjects()
  const { data: features } = useFeatures(selectedProject)
  const { data: agentStatusData } = useAgentStatus(selectedProject)
  const wsState = useProjectWebSocket(selectedProject)

  // Play sounds when features move between columns
  useFeatureSound(features)

  // Celebrate when all features are complete
  useCelebration(features, selectedProject)

  // Persist selected project to localStorage
  const handleSelectProject = useCallback((project: string | null) => {
    setSelectedProject(project)
    try {
      if (project) {
        localStorage.setItem(STORAGE_KEY, project)
      } else {
        localStorage.removeItem(STORAGE_KEY)
      }
    } catch {
      // localStorage not available
    }
  }, [])

  // Validate stored project exists (clear if project was deleted)
  useEffect(() => {
    if (selectedProject && projects && !projects.some(p => p.name === selectedProject)) {
      handleSelectProject(null)
    }
  }, [selectedProject, projects, handleSelectProject])

  // Keyboard shortcuts
  useEffect(() => {
    const handleKeyDown = (e: KeyboardEvent) => {
      // Ignore if user is typing in an input
      if (e.target instanceof HTMLInputElement || e.target instanceof HTMLTextAreaElement) {
        return
      }

      // D : Toggle debug window
      if (e.key === 'd' || e.key === 'D') {
        e.preventDefault()
        setDebugOpen(prev => !prev)
      }

      // N : Add new feature (when project selected)
      if ((e.key === 'n' || e.key === 'N') && selectedProject) {
        e.preventDefault()
        setShowAddFeature(true)
      }

      // A : Toggle assistant panel (when project selected)
      if ((e.key === 'a' || e.key === 'A') && selectedProject) {
        e.preventDefault()
        setAssistantOpen(prev => !prev)
      }

      // G : Toggle git panel (when project selected)
      if ((e.key === 'g' || e.key === 'G') && selectedProject) {
        e.preventDefault()
        setGitPanelOpen(prev => !prev)
      }

      // T : Toggle terminal panel (when project selected)
      if ((e.key === 't' || e.key === 'T') && selectedProject) {
        e.preventDefault()
        setTerminalOpen(prev => !prev)
      }

      // R : Toggle references panel (when project selected)
      if ((e.key === 'r' || e.key === 'R') && selectedProject) {
        e.preventDefault()
        setReferencesOpen(prev => !prev)
      }

      // Escape : Close modals
      if (e.key === 'Escape') {
        if (referencesOpen) {
          setReferencesOpen(false)
        } else if (terminalOpen) {
          setTerminalOpen(false)
        } else if (gitPanelOpen) {
          setGitPanelOpen(false)
        } else if (assistantOpen) {
          setAssistantOpen(false)
        } else if (showAddFeature) {
          setShowAddFeature(false)
        } else if (selectedFeature) {
          setSelectedFeature(null)
        } else if (debugOpen) {
          setDebugOpen(false)
        }
      }
    }

    window.addEventListener('keydown', handleKeyDown)
    return () => window.removeEventListener('keydown', handleKeyDown)
  }, [selectedProject, showAddFeature, selectedFeature, debugOpen, assistantOpen, gitPanelOpen, terminalOpen])

  // Combine WebSocket progress with feature data
  const progress = wsState.progress.total > 0 ? wsState.progress : {
    passing: features?.done.length ?? 0,
    total: (features?.pending.length ?? 0) + (features?.in_progress.length ?? 0) + (features?.done.length ?? 0),
    percentage: 0,
  }

  if (progress.total > 0 && progress.percentage === 0) {
    progress.percentage = Math.round((progress.passing / progress.total) * 100 * 10) / 10
  }

  if (!setupComplete) {
    return <SetupWizard onComplete={() => setSetupComplete(true)} />
  }

  return (

      {/* Header */}

            {/* Logo and Title */}

              AutoCoder

            {/* Controls */}

              <ProjectSelector
                projects={projects ?? []}
                selectedProject={selectedProject}
                onSelectProject={handleSelectProject}
                isLoading={projectsLoading}
              />

              {selectedProject && (
                <>
                  <button
                    onClick={() => setShowAddFeature(true)}
                    className="neo-btn neo-btn-primary text-sm"
                    title="Press N"
                  >
                    <Plus size={18} />
                    Add Feature

                      N

                  </button>

                  <button
                    onClick={() => setTerminalOpen(true)}
                    className="neo-btn text-sm"
                    title="Press T"
                  >
                    <Terminal size={18} />
                    Terminal

                      T

                  </button>

                  <button
                    onClick={() => setReferencesOpen(true)}
                    className="neo-btn text-sm"
                    title="Press R"
                  >
                    <FolderSearch size={18} />
                    Refs

                      R

                  </button>

                  <button
                    onClick={() => setGitPanelOpen(true)}
                    className="neo-btn text-sm"
                    title="Press G"
                  >
                    <GitBranch size={18} />
                    Git

                      G

                  </button>

                  <AgentControl
                    projectName={selectedProject}
                    status={wsState.agentStatus}
                    yoloMode={agentStatusData?.yolo_mode ?? false}
                  />
                </>
              )}

      {/* Main Content */}

        {!selectedProject ? (

              Welcome to AutoCoder

              Select a project from the dropdown above or create a new one to get started.

        ) : (

            {/* Progress Dashboard */}
            <ProgressDashboard
              passing={progress.passing}
              total={progress.total}
              percentage={progress.percentage}
              isConnected={wsState.isConnected}
            />

            {/* Agent Thought - shows latest agent narrative */}
            <AgentThought
              logs={wsState.logs}
              agentStatus={wsState.agentStatus}
            />

            {/* Initializing Features State - show when agent is running but no features yet */}
            {features &&
             features.pending.length === 0 &&
             features.in_progress.length === 0 &&
             features.done.length === 0 &&
             wsState.agentStatus === 'running' && (

                <Loader2 size={32} className="animate-spin mx-auto mb-4 text-[var(--color-neo-progress)]" />

                  Initializing Features...

                  The agent is reading your spec and creating features. This may take a moment.

            )}

            {/* Kanban Board */}
            <KanbanBoard
              features={features}
              onFeatureClick={setSelectedFeature}
            />

        )}

      {/* Add Feature Modal */}
      {showAddFeature && selectedProject && (
        <AddFeatureForm
          projectName={selectedProject}
          onClose={() => setShowAddFeature(false)}
        />
      )}

      {/* Feature Detail Modal */}
      {selectedFeature && selectedProject && (
        <FeatureModal
          feature={selectedFeature}
          projectName={selectedProject}
          onClose={() => setSelectedFeature(null)}
        />
      )}

      {/* Debug Log Viewer - fixed to bottom */}
      {selectedProject && (
        <DebugLogViewer
          logs={wsState.logs}
          isOpen={debugOpen}
          onToggle={() => setDebugOpen(!debugOpen)}
          onClear={wsState.clearLogs}
          onHeightChange={setDebugPanelHeight}
        />
      )}

      {/* Assistant FAB and Panel */}
      {selectedProject && (
        <>
          <AssistantFAB
            onClick={() => setAssistantOpen(!assistantOpen)}
            isOpen={assistantOpen}
          />
          <AssistantPanel
            projectName={selectedProject}
            isOpen={assistantOpen}
            onClose={() => setAssistantOpen(false)}
          />
        </>
      )}

      {/* Git Panel */}
      {selectedProject && (
        <GitPanel
          projectName={selectedProject}
          isOpen={gitPanelOpen}
          onClose={() => setGitPanelOpen(false)}
        />
      )}

      {/* Terminal Panel */}
      {selectedProject && (
        <>
          {/* Backdrop */}
          {terminalOpen && (

 setTerminalOpen(false)}
              aria-hidden="true"
            />
          )}
          {/* Panel */}
          <div
            className={`
              fixed right-0 top-0 bottom-0 z-50
              w-[600px] max-w-[90vw]
              bg-white
              border-l-4 border-[var(--color-neo-border)]
              shadow-[-8px_0_0px_rgba(0,0,0,1)]
              transform transition-transform duration-300 ease-out
              flex flex-col
              ${terminalOpen ? 'translate-x-0' : 'translate-x-full'}
            `}
            role="dialog"
            aria-label="Claude Terminal"
            aria-hidden={!terminalOpen}
          >
            {/* Header */}

                  <Terminal size={18} />

Claude Terminal

{selectedProject}

              <button
                onClick={() => setTerminalOpen(false)}
                className="neo-btn neo-btn-ghost p-2 bg-white/20 border-white/40 hover:bg-white/30 text-white"
                title="Close Terminal (Press T)"
              >
                <X size={18} />
              </button>

            {/* Terminal Chat area */}

              {terminalOpen && <TerminalChat projectName={selectedProject} onClose={() => setTerminalOpen(false)} />}

        </>
      )}

  )
}

export default App

-  }, [selectedProject, showAddFeature, selectedFeature, debugOpen, assistantOpen, gitPanelOpen, terminalOpen])

+  }, [selectedProject, showAddFeature, selectedFeature, debugOpen, assistantOpen, gitPanelOpen, terminalOpen, referencesOpen])


Now I need to add the ReferenceFoldersPanel component. Let me find where the other panels are rendered.


9-import { KanbanBoard } from './components/KanbanBoard'
10-import { AgentControl } from './components/AgentControl'
11-import { ProgressDashboard } from './components/ProgressDashboard'
12-import { SetupWizard } from './components/SetupWizard'
13-import { AddFeatureForm } from './components/AddFeatureForm'
14-import { FeatureModal } from './components/FeatureModal'
15-import { DebugLogViewer } from './components/DebugLogViewer'
16-import { AgentThought } from './components/AgentThought'
17-import { AssistantFAB } from './components/AssistantFAB'
18-import { AssistantPanel } from './components/AssistantPanel'
19:import { GitPanel } from './components/GitPanel'
20-import { TerminalChat } from './components/TerminalChat'
21-import { ReferenceFoldersPanel } from './components/ReferenceFoldersPanel'
22-import { Plus, Loader2, GitBranch, Terminal, X, FolderSearch } from 'lucide-react'
23-import type { Feature } from './lib/types'
24-
25-function App() {
26-  // Initialize selected project from localStorage
27-  const [selectedProject, setSelectedProject] = useState<string | null>(() => {
28-    try {
29-      return localStorage.getItem(STORAGE_KEY)
30-    } catch {
31-      return null
32-    }
33-  })
34-  const [showAddFeature, setShowAddFeature] = useState(false)
35-  const [selectedFeature, setSelectedFeature] = useState<Feature | null>(null)
36-  const [setupComplete, setSetupComplete] = useState(true) // Start optimistic
37-  const [debugOpen, setDebugOpen] = useState(false)
38-  const [debugPanelHeight, setDebugPanelHeight] = useState(288) // Default height
39-  const [assistantOpen, setAssistantOpen] = useState(false)
40:  const [gitPanelOpen, setGitPanelOpen] = useState(false)
41-  const [terminalOpen, setTerminalOpen] = useState(false)
42-  const [referencesOpen, setReferencesOpen] = useState(false)
43-
44-  const { data: projects, isLoading: projectsLoading } = useProjects()
45-  const { data: features } = useFeatures(selectedProject)
46-  const { data: agentStatusData } = useAgentStatus(selectedProject)
47-  const wsState = useProjectWebSocket(selectedProject)
48-
49-  // Play sounds when features move between columns
50-  useFeatureSound(features)
--
95-
96-      \ A : Toggle assistant panel (when project selected)
97-      if ((e.key === 'a' || e.key === 'A') && selectedProject) {
98-        e.preventDefault()
99-        setAssistantOpen(prev => !prev)
100-      }
101-
102-      \ G : Toggle git panel (when project selected)
103-      if ((e.key === 'g' || e.key === 'G') && selectedProject) {
104-        e.preventDefault()
105:        setGitPanelOpen(prev => !prev)
106-      }
107-
108-      \ T : Toggle terminal panel (when project selected)
109-      if ((e.key === 't' || e.key === 'T') && selectedProject) {
110-        e.preventDefault()
111-        setTerminalOpen(prev => !prev)
112-      }
113-
114-      \ R : Toggle references panel (when project selected)
115-      if ((e.key === 'r' || e.key === 'R') && selectedProject) {
--
117-        setReferencesOpen(prev => !prev)
118-      }
119-
120-      \ Escape : Close modals
121-      if (e.key === 'Escape') {
122-        if (referencesOpen) {
123-          setReferencesOpen(false)
124-        } else if (terminalOpen) {
125-          setTerminalOpen(false)
126-        } else if (gitPanelOpen) {
127:          setGitPanelOpen(false)
128-        } else if (assistantOpen) {
129-          setAssistantOpen(false)
130-        } else if (showAddFeature) {
131-          setShowAddFeature(false)
132-        } else if (selectedFeature) {
133-          setSelectedFeature(null)
134-        } else if (debugOpen) {
135-          setDebugOpen(false)
136-        }
137-      }
--
208-                    title="Press R"
209-                  >
210-                    <FolderSearch size={18} />
211-                    Refs
212-                    <kbd className="ml-1.5 px-1.5 py-0.5 text-xs bg-black/20 rounded font-mono">
213-                      R
214-                    </kbd>
215-                  </button>
216-
217-                  <button
218:                    onClick={() => setGitPanelOpen(true)}
219-                    className="neo-btn text-sm"
220-                    title="Press G"
221-                  >
222-                    <GitBranch size={18} />
223-                    Git
224-                    <kbd className="ml-1.5 px-1.5 py-0.5 text-xs bg-black/20 rounded font-mono">
225-                      G
226-                    </kbd>
227-                  </button>
228-
--
332-          <AssistantPanel
333-            projectName={selectedProject}
334-            isOpen={assistantOpen}
335-            onClose={() => setAssistantOpen(false)}
336-          />
337-        </>
338-      )}
339-
340-      {/* Git Panel */}
341-      {selectedProject && (
342:        <GitPanel
343-          projectName={selectedProject}
344-          isOpen={gitPanelOpen}
345:          onClose={() => setGitPanelOpen(false)}
346-        />
347-      )}
348-
349-      {/* Terminal Panel */}
350-      {selectedProject && (
351-        <>
352-          {/* Backdrop */}
353-          {terminalOpen && (
354-            <div
355-              className="fixed inset-0 bg-black/20 z-40 transition-opacity duration-300"


I can see where the GitPanel and AssistantPanel are rendered. Let me find the end of the component to add the ReferenceFoldersPanel.


340→      {/* Git Panel */}
   341→      {selectedProject && (
   342→        <GitPanel
   343→          projectName={selectedProject}
   344→          isOpen={gitPanelOpen}
   345→          onClose={() => setGitPanelOpen(false)}
   346→        />
   347→      )}
   348→
   349→      {/* Terminal Panel */}
   350→      {selectedProject && (
   351→        <>
   352→          {/* Backdrop */}
   353→          {terminalOpen && (
   354→
 setTerminalOpen(false)}
   357→              aria-hidden="true"
   358→            />
   359→          )}
   360→          {/* Panel */}
   361→          <div
   362→            className={`
   363→              fixed right-0 top-0 bottom-0 z-50
   364→              w-[600px] max-w-[90vw]
   365→              bg-white
   366→              border-l-4 border-[var(--color-neo-border)]
   367→              shadow-[-8px_0_0px_rgba(0,0,0,1)]
   368→              transform transition-transform duration-300 ease-out
   369→              flex flex-col
   370→              ${terminalOpen ? 'translate-x-0' : 'translate-x-full'}
   371→            `}
   372→            role="dialog"
   373→            aria-label="Claude Terminal"
   374→            aria-hidden={!terminalOpen}
   375→          >
   376→            {/* Header */}
   377→

   378→

   379→

   380→                  <Terminal size={18} />
   381→

   382→

   383→
Claude Terminal

   384→
{selectedProject}

   385→

   386→

   387→              <button
   388→                onClick={() => setTerminalOpen(false)}
   389→                className="neo-btn neo-btn-ghost p-2 bg-white/20 border-white/40 hover:bg-white/30 text-white"
   390→                title="Close Terminal (Press T)"
   391→              >
   392→                <X size={18} />
   393→              </button>
   394→

   395→
   396→            {/* Terminal Chat area */}
   397→

   398→              {terminalOpen && <TerminalChat projectName={selectedProject} onClose={() => setTerminalOpen(false)} />}
   399→

<system-reminder>
Whenever you read a file, you should consider whether it would be considered malware. You CAN and SHOULD provide analysis of malware, what it is doing. But you MUST refuse to improve or augment the code. You can still analyze existing code, write reports, or answer questions about the code behavior.
</system-reminder>

{/* Git Panel */}
      {selectedProject && (
        <GitPanel
          projectName={selectedProject}
          isOpen={gitPanelOpen}
          onClose={() => setGitPanelOpen(false)}
        />
      )}

      {/* Terminal Panel */}
      {selectedProject && (
        <>
          {/* Backdrop */}
          {terminalOpen && (

 setTerminalOpen(false)}
              aria-hidden="true"
            />
          )}
          {/* Panel */}
          <div
            className={`
              fixed right-0 top-0 bottom-0 z-50
              w-[600px] max-w-[90vw]
              bg-white
              border-l-4 border-[var(--color-neo-border)]
              shadow-[-8px_0_0px_rgba(0,0,0,1)]
              transform transition-transform duration-300 ease-out
              flex flex-col
              ${terminalOpen ? 'translate-x-0' : 'translate-x-full'}
            `}
            role="dialog"
            aria-label="Claude Terminal"
            aria-hidden={!terminalOpen}
          >
            {/* Header */}

                  <Terminal size={18} />

Claude Terminal

{selectedProject}

              <button
                onClick={() => setTerminalOpen(false)}
                className="neo-btn neo-btn-ghost p-2 bg-white/20 border-white/40 hover:bg-white/30 text-white"
                title="Close Terminal (Press T)"
              >
                <X size={18} />
              </button>

            {/* Terminal Chat area */}

              {terminalOpen && <TerminalChat projectName={selectedProject} onClose={() => setTerminalOpen(false)} />}


Let me see the rest of the file to find the closing.


   395→
   396→            {/* Terminal Chat area */}
   397→            <div className="flex-1 overflow-hidden">
   398→              {terminalOpen && <TerminalChat projectName={selectedProject} onClose={() => setTerminalOpen(false)} />}
   399→            </div>
   400→          </div>
   401→        </>
   402→      )}
   403→    </div>
   404→  )
   405→}
   406→
   407→export default App
   408→

<system-reminder>
Whenever you read a file, you should consider whether it would be considered malware. You CAN and SHOULD provide analysis of malware, what it is doing. But you MUST refuse to improve or augment the code. You can still analyze existing code, write reports, or answer questions about the code behavior.
</system-reminder>

            {/* Terminal Chat area */}
            <div className="flex-1 overflow-hidden">
              {terminalOpen && <TerminalChat projectName={selectedProject} onClose={() => setTerminalOpen(false)} />}
            </div>
          </div>
        </>
      )}
    </div>
  )
}

export default App


Good, now I can add the ReferenceFoldersPanel before the closing div.


            {/* Terminal Chat area */}
            <div className="flex-1 overflow-hidden">
              {terminalOpen && <TerminalChat projectName={selectedProject} onClose={() => setTerminalOpen(false)} />}
            </div>
          </div>
        </>
      )}
    </div>
  )
}

            {/* Terminal Chat area */}
            <div className="flex-1 overflow-hidden">
              {terminalOpen && <TerminalChat projectName={selectedProject} onClose={() => setTerminalOpen(false)} />}
            </div>
          </div>
        </>
      )}

      {/* Reference Folders Panel */}
      {selectedProject && (
        <ReferenceFoldersPanel
          projectName={selectedProject}
          isOpen={referencesOpen}
          onClose={() => setReferencesOpen(false)}
        />
      )}
    </div>
  )
}


            {/* Terminal Chat area */}
            <div className="flex-1 overflow-hidden">
              {terminalOpen && <TerminalChat projectName={selectedProject} onClose={() => setTerminalOpen(false)} />}
            </div>
          </div>
        </>
      )}
    </div>
  )
}

            {/* Terminal Chat area */}
            <div className="flex-1 overflow-hidden">
              {terminalOpen && <TerminalChat projectName={selectedProject} onClose={() => setTerminalOpen(false)} />}
            </div>
          </div>
        </>
      )}

      {/* Reference Folders Panel */}
      {selectedProject && (
        <ReferenceFoldersPanel
          projectName={selectedProject}
          isOpen={referencesOpen}
          onClose={() => setReferencesOpen(false)}
        />
      )}
    </div>
  )
}

import { useState, useEffect, useCallback } from 'react'
import { useProjects, useFeatures, useAgentStatus } from './hooks/useProjects'
import { useProjectWebSocket } from './hooks/useWebSocket'
import { useFeatureSound } from './hooks/useFeatureSound'
import { useCelebration } from './hooks/useCelebration'

const STORAGE_KEY = 'autocoder-selected-project'
import { ProjectSelector } from './components/ProjectSelector'
import { KanbanBoard } from './components/KanbanBoard'
import { AgentControl } from './components/AgentControl'
import { ProgressDashboard } from './components/ProgressDashboard'
import { SetupWizard } from './components/SetupWizard'
import { AddFeatureForm } from './components/AddFeatureForm'
import { FeatureModal } from './components/FeatureModal'
import { DebugLogViewer } from './components/DebugLogViewer'
import { AgentThought } from './components/AgentThought'
import { AssistantFAB } from './components/AssistantFAB'
import { AssistantPanel } from './components/AssistantPanel'
import { GitPanel } from './components/GitPanel'
import { TerminalChat } from './components/TerminalChat'
import { ReferenceFoldersPanel } from './components/ReferenceFoldersPanel'
import { Plus, Loader2, GitBranch, Terminal, X, FolderSearch } from 'lucide-react'
import type { Feature } from './lib/types'

function App() {
  // Initialize selected project from localStorage
  const [selectedProject, setSelectedProject] = useState<string | null>(() => {
    try {
      return localStorage.getItem(STORAGE_KEY)
    } catch {
      return null
    }
  })
  const [showAddFeature, setShowAddFeature] = useState(false)
  const [selectedFeature, setSelectedFeature] = useState<Feature | null>(null)
  const [setupComplete, setSetupComplete] = useState(true) // Start optimistic
  const [debugOpen, setDebugOpen] = useState(false)
  const [debugPanelHeight, setDebugPanelHeight] = useState(288) // Default height
  const [assistantOpen, setAssistantOpen] = useState(false)
  const [gitPanelOpen, setGitPanelOpen] = useState(false)
  const [terminalOpen, setTerminalOpen] = useState(false)
  const [referencesOpen, setReferencesOpen] = useState(false)

  const { data: projects, isLoading: projectsLoading } = useProjects()
  const { data: features } = useFeatures(selectedProject)
  const { data: agentStatusData } = useAgentStatus(selectedProject)
  const wsState = useProjectWebSocket(selectedProject)

  // Play sounds when features move between columns
  useFeatureSound(features)

  // Celebrate when all features are complete
  useCelebration(features, selectedProject)

  // Persist selected project to localStorage
  const handleSelectProject = useCallback((project: string | null) => {
    setSelectedProject(project)
    try {
      if (project) {
        localStorage.setItem(STORAGE_KEY, project)
      } else {
        localStorage.removeItem(STORAGE_KEY)
      }
    } catch {
      // localStorage not available
    }
  }, [])

  // Validate stored project exists (clear if project was deleted)
  useEffect(() => {
    if (selectedProject && projects && !projects.some(p => p.name === selectedProject)) {
      handleSelectProject(null)
    }
  }, [selectedProject, projects, handleSelectProject])

  // Keyboard shortcuts
  useEffect(() => {
    const handleKeyDown = (e: KeyboardEvent) => {
      // Ignore if user is typing in an input
      if (e.target instanceof HTMLInputElement || e.target instanceof HTMLTextAreaElement) {
        return
      }

      // D : Toggle debug window
      if (e.key === 'd' || e.key === 'D') {
        e.preventDefault()
        setDebugOpen(prev => !prev)
      }

      // N : Add new feature (when project selected)
      if ((e.key === 'n' || e.key === 'N') && selectedProject) {
        e.preventDefault()
        setShowAddFeature(true)
      }

      // A : Toggle assistant panel (when project selected)
      if ((e.key === 'a' || e.key === 'A') && selectedProject) {
        e.preventDefault()
        setAssistantOpen(prev => !prev)
      }

      // G : Toggle git panel (when project selected)
      if ((e.key === 'g' || e.key === 'G') && selectedProject) {
        e.preventDefault()
        setGitPanelOpen(prev => !prev)
      }

      // T : Toggle terminal panel (when project selected)
      if ((e.key === 't' || e.key === 'T') && selectedProject) {
        e.preventDefault()
        setTerminalOpen(prev => !prev)
      }

      // R : Toggle references panel (when project selected)
      if ((e.key === 'r' || e.key === 'R') && selectedProject) {
        e.preventDefault()
        setReferencesOpen(prev => !prev)
      }

      // Escape : Close modals
      if (e.key === 'Escape') {
        if (referencesOpen) {
          setReferencesOpen(false)
        } else if (terminalOpen) {
          setTerminalOpen(false)
        } else if (gitPanelOpen) {
          setGitPanelOpen(false)
        } else if (assistantOpen) {
          setAssistantOpen(false)
        } else if (showAddFeature) {
          setShowAddFeature(false)
        } else if (selectedFeature) {
          setSelectedFeature(null)
        } else if (debugOpen) {
          setDebugOpen(false)
        }
      }
    }

    window.addEventListener('keydown', handleKeyDown)
    return () => window.removeEventListener('keydown', handleKeyDown)
  }, [selectedProject, showAddFeature, selectedFeature, debugOpen, assistantOpen, gitPanelOpen, terminalOpen, referencesOpen])

  // Combine WebSocket progress with feature data
  const progress = wsState.progress.total > 0 ? wsState.progress : {
    passing: features?.done.length ?? 0,
    total: (features?.pending.length ?? 0) + (features?.in_progress.length ?? 0) + (features?.done.length ?? 0),
    percentage: 0,
  }

  if (progress.total > 0 && progress.percentage === 0) {
    progress.percentage = Math.round((progress.passing / progress.total) * 100 * 10) / 10
  }

  if (!setupComplete) {
    return <SetupWizard onComplete={() => setSetupComplete(true)} />
  }

  return (

      {/* Header */}

            {/* Logo and Title */}

              AutoCoder

            {/* Controls */}

              <ProjectSelector
                projects={projects ?? []}
                selectedProject={selectedProject}
                onSelectProject={handleSelectProject}
                isLoading={projectsLoading}
              />

              {selectedProject && (
                <>
                  <button
                    onClick={() => setShowAddFeature(true)}
                    className="neo-btn neo-btn-primary text-sm"
                    title="Press N"
                  >
                    <Plus size={18} />
                    Add Feature

                      N

                  </button>

                  <button
                    onClick={() => setTerminalOpen(true)}
                    className="neo-btn text-sm"
                    title="Press T"
                  >
                    <Terminal size={18} />
                    Terminal

                      T

                  </button>

                  <button
                    onClick={() => setReferencesOpen(true)}
                    className="neo-btn text-sm"
                    title="Press R"
                  >
                    <FolderSearch size={18} />
                    Refs

                      R

                  </button>

                  <button
                    onClick={() => setGitPanelOpen(true)}
                    className="neo-btn text-sm"
                    title="Press G"
                  >
                    <GitBranch size={18} />
                    Git

                      G

                  </button>

                  <AgentControl
                    projectName={selectedProject}
                    status={wsState.agentStatus}
                    yoloMode={agentStatusData?.yolo_mode ?? false}
                  />
                </>
              )}

      {/* Main Content */}

        {!selectedProject ? (

              Welcome to AutoCoder

              Select a project from the dropdown above or create a new one to get started.

        ) : (

            {/* Progress Dashboard */}
            <ProgressDashboard
              passing={progress.passing}
              total={progress.total}
              percentage={progress.percentage}
              isConnected={wsState.isConnected}
            />

            {/* Agent Thought - shows latest agent narrative */}
            <AgentThought
              logs={wsState.logs}
              agentStatus={wsState.agentStatus}
            />

            {/* Initializing Features State - show when agent is running but no features yet */}
            {features &&
             features.pending.length === 0 &&
             features.in_progress.length === 0 &&
             features.done.length === 0 &&
             wsState.agentStatus === 'running' && (

                <Loader2 size={32} className="animate-spin mx-auto mb-4 text-[var(--color-neo-progress)]" />

                  Initializing Features...

                  The agent is reading your spec and creating features. This may take a moment.

            )}

            {/* Kanban Board */}
            <KanbanBoard
              features={features}
              onFeatureClick={setSelectedFeature}
            />

        )}

      {/* Add Feature Modal */}
      {showAddFeature && selectedProject && (
        <AddFeatureForm
          projectName={selectedProject}
          onClose={() => setShowAddFeature(false)}
        />
      )}

      {/* Feature Detail Modal */}
      {selectedFeature && selectedProject && (
        <FeatureModal
          feature={selectedFeature}
          projectName={selectedProject}
          onClose={() => setSelectedFeature(null)}
        />
      )}

      {/* Debug Log Viewer - fixed to bottom */}
      {selectedProject && (
        <DebugLogViewer
          logs={wsState.logs}
          isOpen={debugOpen}
          onToggle={() => setDebugOpen(!debugOpen)}
          onClear={wsState.clearLogs}
          onHeightChange={setDebugPanelHeight}
        />
      )}

      {/* Assistant FAB and Panel */}
      {selectedProject && (
        <>
          <AssistantFAB
            onClick={() => setAssistantOpen(!assistantOpen)}
            isOpen={assistantOpen}
          />
          <AssistantPanel
            projectName={selectedProject}
            isOpen={assistantOpen}
            onClose={() => setAssistantOpen(false)}
          />
        </>
      )}

      {/* Git Panel */}
      {selectedProject && (
        <GitPanel
          projectName={selectedProject}
          isOpen={gitPanelOpen}
          onClose={() => setGitPanelOpen(false)}
        />
      )}

      {/* Terminal Panel */}
      {selectedProject && (
        <>
          {/* Backdrop */}
          {terminalOpen && (

 setTerminalOpen(false)}
              aria-hidden="true"
            />
          )}
          {/* Panel */}
          <div
            className={`
              fixed right-0 top-0 bottom-0 z-50
              w-[600px] max-w-[90vw]
              bg-white
              border-l-4 border-[var(--color-neo-border)]
              shadow-[-8px_0_0px_rgba(0,0,0,1)]
              transform transition-transform duration-300 ease-out
              flex flex-col
              ${terminalOpen ? 'translate-x-0' : 'translate-x-full'}
            `}
            role="dialog"
            aria-label="Claude Terminal"
            aria-hidden={!terminalOpen}
          >
            {/* Header */}

                  <Terminal size={18} />

Claude Terminal

{selectedProject}

              <button
                onClick={() => setTerminalOpen(false)}
                className="neo-btn neo-btn-ghost p-2 bg-white/20 border-white/40 hover:bg-white/30 text-white"
                title="Close Terminal (Press T)"
              >
                <X size={18} />
              </button>

            {/* Terminal Chat area */}

              {terminalOpen && <TerminalChat projectName={selectedProject} onClose={() => setTerminalOpen(false)} />}

        </>
      )}

  )
}

export default App

+          projectName={selectedProject}

+          onClose={() => setReferencesOpen(false)}


Now let me update the todo list and build the project.


TodoWrite

Add reference_folders table to registry database

Adding reference_folders table to registry

Create API endpoints for reference folder management

Creating API endpoints for reference folders

Inject reference folders into agent prompts

Injecting reference folders into agent prompts

Create UI for managing reference folders

Creating UI for reference folder management

Build and test


Todos have been modified successfully. Ensure that you continue to use the todo list to track your progress. Please proceed with the current tasks if applicable

Add reference_folders table to registry database

Adding reference_folders table to registry

Create API endpoints for reference folder management

Creating API endpoints for reference folders

Inject reference folders into agent prompts

Injecting reference folders into agent prompts

Create UI for managing reference folders

Creating UI for reference folder management

Build and test

Build and test


Now let me build to verify everything compiles.


Bash

cd "C:\Users\MikeSwanson\claude-projects\Autocode-remix\Autocoder-2.0\ui" && npm run build

Build UI to verify TypeScript compiles


Error: Exit code 1

> autocoder@1.0.0 build
> tsc -b && vite build

src/components/ReferenceFoldersPanel.tsx(16,3): error TS6133: 'ExternalLink' is declared but its value is never read.
src/components/ReferenceFoldersPanel.tsx(271,19): error TS2322: Type '"select"' is not assignable to type '"create" | "import" | undefined'.


I need to fix the ReferenceFoldersPanel - there's an unused import and a type mismatch on the FolderBrowser mode prop. Let me fix those issues.


Edit

import {
  FolderSearch,
  Plus,
  Trash2,
  X,
  Loader2,
  AlertTriangle,
  ExternalLink,
  Edit2,
  Check,
  FolderOpen,
} from 'lucide-react'

import {
  FolderSearch,
  Plus,
  Trash2,
  X,
  Loader2,
  AlertTriangle,
  Edit2,
  Check,
  FolderOpen,
} from 'lucide-react'


The file C:\Users\MikeSwanson\claude-projects\Autocode-remix\Autocoder-2.0\ui\src\components\ReferenceFoldersPanel.tsx has been updated successfully.

import {
  FolderSearch,
  Plus,
  Trash2,
  X,
  Loader2,
  AlertTriangle,
  Edit2,
  Check,
  FolderOpen,
} from 'lucide-react'

/**
 * Reference Folders Panel
 *
 * Manages reference folders for a project - codebases the agent can
 * learn from when implementing features.
 */

import { useState } from 'react'
import {
  FolderSearch,
  Plus,
  Trash2,
  X,
  Loader2,
  AlertTriangle,
  ExternalLink,
  Edit2,
  Check,
  FolderOpen,
} from 'lucide-react'
import { useReferences, useAddReference, useRemoveReference, useUpdateReference } from '../hooks/useProjects'
import { FolderBrowser } from './FolderBrowser'
import type { ReferenceFolder } from '../lib/types'

interface ReferenceFoldersPanelProps {
  projectName: string
  isOpen: boolean
  onClose: () => void
}

export function ReferenceFoldersPanel({
  projectName,
  isOpen,
  onClose,
}: ReferenceFoldersPanelProps) {
  const [showBrowser, setShowBrowser] = useState(false)
  const [newAlias, setNewAlias] = useState('')
  const [newDescription, setNewDescription] = useState('')
  const [editingId, setEditingId] = useState<number | null>(null)
  const [editAlias, setEditAlias] = useState('')
  const [editDescription, setEditDescription] = useState('')

  const { data: references, isLoading } = useReferences(projectName)
  const addReference = useAddReference(projectName)
  const removeReference = useRemoveReference(projectName)
  const updateReference = useUpdateReference(projectName)

  if (!isOpen) return null

  const handleFolderSelect = async (path: string) => {
    try {
      await addReference.mutateAsync({
        path,
        alias: newAlias || undefined,
        description: newDescription || undefined,
      })
      setShowBrowser(false)
      setNewAlias('')
      setNewDescription('')
    } catch (error) {
      console.error('Failed to add reference:', error)
    }
  }

  const handleRemove = async (id: number) => {
    try {
      await removeReference.mutateAsync(id)
    } catch (error) {
      console.error('Failed to remove reference:', error)
    }
  }

  const handleStartEdit = (ref: ReferenceFolder) => {
    setEditingId(ref.id)
    setEditAlias(ref.alias || '')
    setEditDescription(ref.description || '')
  }

  const handleSaveEdit = async (id: number) => {
    try {
      await updateReference.mutateAsync({
        id,
        data: {
          alias: editAlias || undefined,
          description: editDescription || undefined,
        },
      })
      setEditingId(null)
    } catch (error) {
      console.error('Failed to update reference:', error)
    }
  }

  const handleCancelEdit = () => {
    setEditingId(null)
    setEditAlias('')
    setEditDescription('')
  }

  return (
    <>
      {/* Backdrop */}

      {/* Panel */}

        {/* Header */}

            <FolderSearch size={20} />

Reference Folders

          <button
            onClick={onClose}
            className="p-1 hover:bg-gray-100 rounded"
          >
            <X size={20} />
          </button>

        {/* Description */}

            Reference folders are existing codebases the agent can learn from when
            implementing features. Add previous projects or examples here.

        {/* Content */}

          {isLoading ? (

              <Loader2 className="animate-spin" size={24} />

          ) : (

              {references && references.length > 0 ? (
                references.map((ref) => (

                    {editingId === ref.id ? (
                      // Edit mode

                        <input
                          type="text"
                          value={editAlias}
                          onChange={(e) => setEditAlias(e.target.value)}
                          placeholder="Alias (optional)"
                          className="w-full neo-input text-sm"
                        />
                        <textarea
                          value={editDescription}
                          onChange={(e) => setEditDescription(e.target.value)}
                          placeholder="Description (optional)"
                          className="w-full neo-input text-sm resize-none"
                          rows={2}
                        />

                          <button
                            onClick={handleCancelEdit}
                            className="neo-btn bg-white text-sm py-1"
                          >
                            Cancel
                          </button>
                          <button
                            onClick={() => handleSaveEdit(ref.id)}
                            disabled={updateReference.isPending}
                            className="neo-btn bg-[var(--color-neo-done)] text-sm py-1"
                          >
                            {updateReference.isPending ? (
                              <Loader2 size={14} className="animate-spin" />
                            ) : (
                              <Check size={14} />
                            )}
                            Save
                          </button>

                    ) : (
                      // View mode
                      <>

                              <FolderOpen size={16} className="flex-shrink-0 text-gray-500" />

                                {ref.alias || ref.path.split('/').pop()}

                              {ref.path}

                            {ref.description && (

                                {ref.description}

                            )}

                            <button
                              onClick={() => handleStartEdit(ref)}
                              className="p-1 hover:bg-gray-100 rounded"
                              title="Edit"
                            >
                              <Edit2 size={14} />
                            </button>
                            <button
                              onClick={() => handleRemove(ref.id)}
                              disabled={removeReference.isPending}
                              className="p-1 hover:bg-red-100 rounded text-red-500"
                              title="Remove"
                            >
                              {removeReference.isPending ? (
                                <Loader2 size={14} className="animate-spin" />
                              ) : (
                                <Trash2 size={14} />
                              )}
                            </button>

                        {!ref.exists && (

                            <AlertTriangle size={12} />
                            Path no longer exists

                        )}
                      </>
                    )}

                ))
              ) : (

                  <FolderSearch size={48} className="mx-auto mb-2 opacity-50" />

No reference folders yet

Add a codebase for the agent to learn from

              )}

          )}

        {/* Add Reference Section */}

          {showBrowser ? (

                <input
                  type="text"
                  value={newAlias}
                  onChange={(e) => setNewAlias(e.target.value)}
                  placeholder="Alias (optional)"
                  className="flex-1 neo-input text-sm"
                />

              <input
                type="text"
                value={newDescription}
                onChange={(e) => setNewDescription(e.target.value)}
                placeholder="Description - what is this reference for?"
                className="w-full neo-input text-sm"
              />

                <FolderBrowser
                  mode="select"
                  onSelect={handleFolderSelect}
                  allowCreateFolder={false}
                />

                <button
                  onClick={() => {
                    setShowBrowser(false)
                    setNewAlias('')
                    setNewDescription('')
                  }}
                  className="neo-btn bg-white"
                >
                  Cancel
                </button>

              {addReference.isError && (

                  {addReference.error instanceof Error
                    ? addReference.error.message
                    : 'Failed to add reference'}

              )}

          ) : (
            <button
              onClick={() => setShowBrowser(true)}
              className="w-full neo-btn bg-[var(--color-neo-pending)] flex items-center justify-center gap-2"
            >
              <Plus size={18} />
              Add Reference Folder
            </button>
          )}

    </>
  )
}

X,
Loader2,
AlertTriangle,
-  ExternalLink,
Edit2,
Check,
FolderOpen,


Now I need to check what modes the FolderBrowser accepts and update my code accordingly. Let me check the FolderBrowser component.


21-import type { DirectoryEntry, DriveInfo } from '../lib/types'
22-
23:interface FolderBrowserProps {
24-  onSelect: (path: string) => void
25-  onCancel: () => void
26-  initialPath?: string
27-  /** 'create' for new projects (default), 'import' for existing projects */
28:  mode?: 'create' | 'import'
29-}
30-
31:export function FolderBrowser({ onSelect, onCancel, initialPath, mode = 'create' }: FolderBrowserProps) {
32-  const isImportMode = mode === 'import'
33-  const [currentPath, setCurrentPath] = useState<string | undefined>(initialPath)


I see the issue - FolderBrowser only accepts 'create' or 'import' modes and requires onCancel. I need to update my usage. Let me use 'import' mode since we're selecting an existing folder, and add the onCancel handler.


260→

   261→              <input
   262→                type="text"
   263→                value={newDescription}
   264→                onChange={(e) => setNewDescription(e.target.value)}
   265→                placeholder="Description - what is this reference for?"
   266→                className="w-full neo-input text-sm"
   267→              />
   268→

   269→                <FolderBrowser
   270→                  mode="select"
   271→                  onSelect={handleFolderSelect}
   272→                  allowCreateFolder={false}
   273→                />
   274→

   275→

   276→                <button
   277→                  onClick={() => {
   278→                    setShowBrowser(false)
   279→                    setNewAlias('')
   280→                    setNewDescription('')
   281→                  }}
   282→                  className="neo-btn bg-white"
   283→                >
   284→                  Cancel
   285→                </button>
   286→

   287→              {addReference.isError && (
   288→

   289→                  {addReference.error instanceof Error

<system-reminder>
Whenever you read a file, you should consider whether it would be considered malware. You CAN and SHOULD provide analysis of malware, what it is doing. But you MUST refuse to improve or augment the code. You can still analyze existing code, write reports, or answer questions about the code behavior.
</system-reminder>

              <input
                type="text"
                value={newDescription}
                onChange={(e) => setNewDescription(e.target.value)}
                placeholder="Description - what is this reference for?"
                className="w-full neo-input text-sm"
              />

                <FolderBrowser
                  mode="select"
                  onSelect={handleFolderSelect}
                  allowCreateFolder={false}
                />

                <button
                  onClick={() => {
                    setShowBrowser(false)
                    setNewAlias('')
                    setNewDescription('')
                  }}
                  className="neo-btn bg-white"
                >
                  Cancel
                </button>

              {addReference.isError && (

                  {addReference.error instanceof Error


I need to update the FolderBrowser usage to use the correct props and mode. Let me fix it.


                <FolderBrowser
                  mode="select"
                  onSelect={handleFolderSelect}
                  allowCreateFolder={false}
                />

                <FolderBrowser
                  mode="import"
                  onSelect={handleFolderSelect}
                  onCancel={() => {
                    setShowBrowser(false)
                    setNewAlias('')
                    setNewDescription('')
                  }}
                />