Mike Swanson
75ce1c2fd5
Enhanced code review and frontend validation with intelligent triggers: Code Review Agent Enhancement: - Added Sequential Thinking MCP integration for complex issues - Triggers on 2+ rejections or 3+ critical issues - New escalation format with root cause analysis - Comprehensive solution strategies with trade-off evaluation - Educational feedback to break rejection cycles - Files: .claude/agents/code-review.md (+308 lines) - Docs: CODE_REVIEW_ST_ENHANCEMENT.md, CODE_REVIEW_ST_TESTING.md Frontend Design Skill Enhancement: - Automatic invocation for ANY UI change - Comprehensive validation checklist (200+ checkpoints) - 8 validation categories (visual, interactive, responsive, a11y, etc.) - 3 validation levels (quick, standard, comprehensive) - Integration with code review workflow - Files: .claude/skills/frontend-design/SKILL.md (+120 lines) - Docs: UI_VALIDATION_CHECKLIST.md (462 lines), AUTOMATIC_VALIDATION_ENHANCEMENT.md (587 lines) Settings Optimization: - Repaired .claude/settings.local.json (fixed m365 pattern) - Reduced permissions from 49 to 33 (33% reduction) - Removed duplicates, sorted alphabetically - Created SETTINGS_PERMISSIONS.md documentation Checkpoint Command Enhancement: - Dual checkpoint system (git + database) - Saves session context to API for cross-machine recall - Includes git metadata in database context - Files: .claude/commands/checkpoint.md (+139 lines) Decision Rationale: - Sequential Thinking MCP breaks rejection cycles by identifying root causes - Automatic frontend validation catches UI issues before code review - Dual checkpoints enable complete project memory across machines - Settings optimization improves maintainability Total: 1,200+ lines of documentation and enhancements Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>
72 lines
325 KiB
JSON
72 lines
325 KiB
JSON
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{"parentUuid":"1e3976f7-0aab-4c07-9552-b9598904075e","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_01AScvzABZd4XPN6L38rEDpP","type":"message","role":"assistant","content":[{"type":"text","text":"I'll thoroughly explore the Autocoder-2.0 project and document its structure, components, and functionality. Let me start by examining the project structure and key files."}],"stop_reason":null,"stop_sequence":null,"usage":{"input_tokens":3,"cache_creation_input_tokens":17576,"cache_read_input_tokens":0,"cache_creation":{"ephemeral_5m_input_tokens":17576,"ephemeral_1h_input_tokens":0},"output_tokens":1,"service_tier":"standard"}},"requestId":"req_011CX1pF9MGRRFkP4HYGrVjw","type":"assistant","uuid":"d4315909-9f5e-42bf-9fa6-67fa5a8341f0","timestamp":"2026-01-11T15:19:18.605Z"}
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.py\n./CLAUDE.md\n./client.py\n./config.py\n./LICENSE.md\n./mcp_server/feature_mcp.py\n./mcp_server/__init__.py\n./parallel_agent.py\n./progress.py\n./prompts.py\n./README.md\n./registry.py\n./SAMPLE_PROMPT.md\n./security.py\n./server/agents/git_agent.py\n./server/agents/__init__.py\n./server/main.py\n./server/routers/agent.py\n./server/routers/assistant_chat.py\n./server/routers/features.py\n./server/routers/filesystem.py\n./server/routers/git.py\n./server/routers/projects.py\n./server/routers/scheduler.py\n./server/routers/spec_creation.py\n./server/routers/terminal.py\n./server/routers/__init__.py\n./server/schemas.py\n./server/services/assistant_chat_session.py\n./server/services/assistant_database.py\n./server/services/credential_resolver.py\n./server/services/feature_graph.py\n./server/services/file_lock.py\n./server/services/git_operations.py\n./server/services/process_manager.py\n./server/services/resource_manager.py\n./server/services/smart_scheduler.py\n./server/services/spec_chat_session.py\n./server/services/terminal_session.py\n./server/services/__init__.py\n./server/websocket.py\n./server/__init__.py\n./smart_orchestrator.py\n./start.py\n./start_ui.py\n./test_security.py\n./ui/node_modules/.package-lock.json\n./ui/node_modules/@babel/code-frame/package.json\n./ui/node_modules/@babel/code-frame/README.md\n./ui/node_modules/@babel/compat-data/data/corejs2-built-ins.json\n./ui/node_modules/@babel/compat-data/data/corejs3-shipped-proposals.json\n./ui/node_modules/@babel/compat-data/data/native-modules.json\n./ui/node_modules/@babel/compat-data/data/overlapping-plugins.json\n./ui/node_modules/@babel/compat-data/data/plugin-bugfixes.json\n./ui/node_modules/@babel/compat-data/data/plugins.json\n./ui/node_modules/@babel/compat-data/package.json\n./ui/node_modules/@babel/compat-data/README.md\n./ui/node_modules/@babel/core/package.json\n./ui/node_modules/@babel/core/README.md\n./ui/node_modules/@babel/core/src/config/files/index-browser.ts\n./ui/node_modules/@babel/core/src/config/files/index.ts\n./ui/node_modules/@babel/core/src/config/resolve-targets-browser.ts\n./ui/node_modules/@babel/core/src/config/resolve-targets.ts\n./ui/node_modules/@babel/core/src/transform-file-browser.ts\n./ui/node_modules/@babel/core/src/transform-file.ts\n./ui/node_modules/@babel/generator/package.json\n./ui/node_modules/@babel/generator/README.md\n./ui/node_modules/@babel/helper-compilation-targets/package.json\n./ui/node_modules/@babel/helper-compilation-targets/README.md\n./ui/node_modules/@babel/helper-globals/data/browser-upper.json\n./ui/node_modules/@babel/helper-globals/data/builtin-lower.json\n./ui/node_modules/@babel/helper-globals/data/builtin-upper.json\n./ui/node_modules/@babel/helper-globals/package.json\n./ui/node_modules/@babel/helper-globals/README.md\n./ui/node_modules/@babel/helper-module-imports/package.json\n./ui/node_modules/@babel/helper-module-imports/README.md\n./ui/node_modules/@babel/helper-module-transforms/package.json\n./ui/node_modules/@babel/helper-module-transforms/README.md\n./ui/node_modules/@babel/helper-plugin-utils/package.json\n./ui/node_modules/@babel/helper-plugin-utils/README.md\n./ui/node_modules/@babel/helper-string-parser/package.json\n./ui/node_modules/@babel/helper-string-parser/README.md\n./ui/node_modules/@babel/helper-validator-identifier/package.json\n./ui/node_modules/@babel/helper-validator-identifier/README.md\n./ui/node_modules/@babel/helper-validator-option/package.json\n./ui/node_modules/@babel/helper-validator-option/README.md\n./ui/node_modules/@babel/helpers/package.json\n./ui/node_modules/@babel/helpers/README.md\r","stderr":"","interrupted":false,"isImage":false},"sourceToolAssistantUUID":"76a9a17a-daf6-471a-a0fe-803e722f6787"}
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{"parentUuid":"e29d6c95-1a45-4dc1-b737-9d8a2483960f","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_01B6rRSaHjvjbwecM9RCG7da","type":"message","role":"assistant","content":[{"type":"text","text":"Let me get a cleaner directory structure view and explore the key files:"}],"stop_reason":null,"stop_sequence":null,"usage":{"input_tokens":5,"cache_creation_input_tokens":1555,"cache_read_input_tokens":17576,"cache_creation":{"ephemeral_5m_input_tokens":1555,"ephemeral_1h_input_tokens":0},"output_tokens":3,"service_tier":"standard"}},"requestId":"req_011CX1pGLKMBdtLyZXDDKBQt","type":"assistant","uuid":"3e817b51-6805-4b7e-aa56-14e80af5a4b3","timestamp":"2026-01-11T15:19:33.979Z"}
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{"parentUuid":"3e817b51-6805-4b7e-aa56-14e80af5a4b3","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_01B6rRSaHjvjbwecM9RCG7da","type":"message","role":"assistant","content":[{"type":"tool_use","id":"toolu_01KYUX9yADyTWtzC9s1Jr8tM","name":"Bash","input":{"command":"cd \"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0\" && find . -maxdepth 3 -type d | grep -v node_modules | sort"}}],"stop_reason":"tool_use","stop_sequence":null,"usage":{"input_tokens":5,"cache_creation_input_tokens":1555,"cache_read_input_tokens":17576,"cache_creation":{"ephemeral_5m_input_tokens":1555,"ephemeral_1h_input_tokens":0},"output_tokens":121,"service_tier":"standard"}},"requestId":"req_011CX1pGLKMBdtLyZXDDKBQt","type":"assistant","uuid":"fcc91f6c-af6b-4561-83e9-0dddaeaf8bbe","timestamp":"2026-01-11T15:19:34.811Z"}
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{"parentUuid":"fcc91f6c-af6b-4561-83e9-0dddaeaf8bbe","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","type":"user","message":{"role":"user","content":[{"tool_use_id":"toolu_01KYUX9yADyTWtzC9s1Jr8tM","type":"tool_result","content":".\n./.claude\n./.claude/commands\n./.claude/skills\n./.claude/skills/frontend-design\n./.claude/templates\n./.github\n./.github/workflows\n./__pycache__\n./api\n./api/__pycache__\n./mcp_server\n./server\n./server/__pycache__\n./server/agents\n./server/agents/__pycache__\n./server/routers\n./server/routers/__pycache__\n./server/services\n./server/services/__pycache__\n./ui\n./ui/dist\n./ui/dist/assets\n./ui/public\n./ui/src\n./ui/src/components\n./ui/src/hooks\n./ui/src/lib\n./ui/src/styles\n./venv\n./venv/Include\n./venv/Include/site\n./venv/Lib\n./venv/Lib/site-packages\n./venv/Scripts\n./venv/Scripts/__pycache__","is_error":false}]},"uuid":"00c2f3c5-3b24-4b73-8672-963dc01f7764","timestamp":"2026-01-11T15:20:18.554Z","toolUseResult":{"stdout":".\n./.claude\n./.claude/commands\n./.claude/skills\n./.claude/skills/frontend-design\n./.claude/templates\n./.github\n./.github/workflows\n./__pycache__\n./api\n./api/__pycache__\n./mcp_server\n./server\n./server/__pycache__\n./server/agents\n./server/agents/__pycache__\n./server/routers\n./server/routers/__pycache__\n./server/services\n./server/services/__pycache__\n./ui\n./ui/dist\n./ui/dist/assets\n./ui/public\n./ui/src\n./ui/src/components\n./ui/src/hooks\n./ui/src/lib\n./ui/src/styles\n./venv\n./venv/Include\n./venv/Include/site\n./venv/Lib\n./venv/Lib/site-packages\n./venv/Scripts\n./venv/Scripts/__pycache__\r","stderr":"","interrupted":false,"isImage":false},"sourceToolAssistantUUID":"fcc91f6c-af6b-4561-83e9-0dddaeaf8bbe"}
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{"parentUuid":"00c2f3c5-3b24-4b73-8672-963dc01f7764","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_01QrRXjTTPuFgFAeh1W9dPdS","type":"message","role":"assistant","content":[{"type":"text","text":"Now let me read the main documentation and key files:"}],"stop_reason":null,"stop_sequence":null,"usage":{"input_tokens":4,"cache_creation_input_tokens":399,"cache_read_input_tokens":19131,"cache_creation":{"ephemeral_5m_input_tokens":399,"ephemeral_1h_input_tokens":0},"output_tokens":231,"service_tier":"standard"}},"requestId":"req_011CX1pKpkDgMX4rDtkXfHTW","type":"assistant","uuid":"11874d67-2ef1-4059-a4a2-b772f5bca97e","timestamp":"2026-01-11T15:20:26.217Z"}
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{"parentUuid":"a99729a4-3add-44eb-829a-eab386585ba1","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","type":"user","message":{"role":"user","content":[{"tool_use_id":"toolu_01P5dpLfKpJW3HuZk5e8re1x","type":"tool_result","content":" 1→# AutoCoder\n 2→\n 3→[](https://www.buymeacoffee.com/leonvanzyl)\n 4→\n 5→A long-running autonomous coding agent powered by the Claude Agent SDK. This tool can build complete applications over multiple sessions using a two-agent pattern (initializer + coding agent). Includes a React-based UI for monitoring progress in real-time.\n 6→\n 7→## Video Tutorial\n 8→\n 9→[](https://youtu.be/lGWFlpffWk4)\n 10→\n 11→> **[Watch the setup and usage guide →](https://youtu.be/lGWFlpffWk4)**\n 12→\n 13→---\n 14→\n 15→## Prerequisites\n 16→\n 17→### Claude Code CLI (Required)\n 18→\n 19→This project requires the Claude Code CLI to be installed. Install it using one of these methods:\n 20→\n 21→**macOS / Linux:**\n 22→```bash\n 23→curl -fsSL https://claude.ai/install.sh | bash\n 24→```\n 25→\n 26→**Windows (PowerShell):**\n 27→```powershell\n 28→irm https://claude.ai/install.ps1 | iex\n 29→```\n 30→\n 31→### Authentication\n 32→\n 33→You need one of the following:\n 34→\n 35→- **Claude Pro/Max Subscription** - Use `claude login` to authenticate (recommended)\n 36→- **Anthropic API Key** - Pay-per-use from https://console.anthropic.com/\n 37→\n 38→---\n 39→\n 40→## Quick Start\n 41→\n 42→### Option 1: Web UI (Recommended)\n 43→\n 44→**Windows:**\n 45→```cmd\n 46→start_ui.bat\n 47→```\n 48→\n 49→**macOS / Linux:**\n 50→```bash\n 51→./start_ui.sh\n 52→```\n 53→\n 54→This launches the React-based web UI at `http://localhost:5173` with:\n 55→- Project selection and creation\n 56→- Kanban board view of features\n 57→- Real-time agent output streaming\n 58→- Start/pause/stop controls\n 59→\n 60→### Option 2: CLI Mode\n 61→\n 62→**Windows:**\n 63→```cmd\n 64→start.bat\n 65→```\n 66→\n 67→**macOS / Linux:**\n 68→```bash\n 69→./start.sh\n 70→```\n 71→\n 72→The start script will:\n 73→1. Check if Claude CLI is installed\n 74→2. Check if you're authenticated (prompt to run `claude login` if not)\n 75→3. Create a Python virtual environment\n 76→4. Install dependencies\n 77→5. Launch the main menu\n 78→\n 79→### Creating or Continuing a Project\n 80→\n 81→You'll see options to:\n 82→- **Create new project** - Start a fresh project with AI-assisted spec generation\n 83→- **Continue existing project** - Resume work on a previous project\n 84→\n 85→For new projects, you can use the built-in `/create-spec` command to interactively create your app specification with Claude's help.\n 86→\n 87→---\n 88→\n 89→## How It Works\n 90→\n 91→### Two-Agent Pattern\n 92→\n 93→1. **Initializer Agent (First Session):** Reads your app specification, creates features in a SQLite database (`features.db`), sets up the project structure, and initializes git.\n 94→\n 95→2. **Coding Agent (Subsequent Sessions):** Picks up where the previous session left off, implements features one by one, and marks them as passing in the database.\n 96→\n 97→### Feature Management\n 98→\n 99→Features are stored in SQLite via SQLAlchemy and managed through an MCP server that exposes tools to the agent:\n 100→- `feature_get_stats` - Progress statistics\n 101→- `feature_get_next` - Get highest-priority pending feature\n 102→- `feature_get_for_regression` - Random passing features for regression testing\n 103→- `feature_mark_passing` - Mark feature complete\n 104→- `feature_skip` - Move feature to end of queue\n 105→- `feature_create_bulk` - Initialize all features (used by initializer)\n 106→\n 107→### Session Management\n 108→\n 109→- Each session runs with a fresh context window\n 110→- Progress is persisted via SQLite database and git commits\n 111→- The agent auto-continues between sessions (3 second delay)\n 112→- Press `Ctrl+C` to pause; run the start script again to resume\n 113→\n 114→---\n 115→\n 116→## Important Timing Expectations\n 117→\n 118→> **Note: Building complete applications takes time!**\n 119→\n 120→- **First session (initialization):** The agent generates feature test cases. This takes several minutes and may appear to hang - this is normal.\n 121→\n 122→- **Subsequent sessions:** Each coding iteration can take **5-15 minutes** depending on complexity.\n 123→\n 124→- **Full app:** Building all features typically requires **many hours** of total runtime across multiple sessions.\n 125→\n 126→**Tip:** The feature count in the prompts determines scope. For faster demos, you can modify your app spec to target fewer features (e.g., 20-50 features for a quick demo).\n 127→\n 128→---\n 129→\n 130→## Project Structure\n 131→\n 132→```\n 133→autonomous-coding/\n 134→├── start.bat # Windows CLI start script\n 135→├── start.sh # macOS/Linux CLI start script\n 136→├── start_ui.bat # Windows Web UI start script\n 137→├── start_ui.sh # macOS/Linux Web UI start script\n 138→├── start.py # CLI menu and project management\n 139→├── start_ui.py # Web UI backend (FastAPI server launcher)\n 140→├── autonomous_agent_demo.py # Agent entry point\n 141→├── agent.py # Agent session logic\n 142→├── client.py # Claude SDK client configuration\n 143→├── security.py # Bash command allowlist and validation\n 144→├── progress.py # Progress tracking utilities\n 145→├── prompts.py # Prompt loading utilities\n 146→├── api/\n 147→│ └── database.py # SQLAlchemy models (Feature table)\n 148→├── mcp_server/\n 149→│ └── feature_mcp.py # MCP server for feature management tools\n 150→├── server/\n 151→│ ├── main.py # FastAPI REST API server\n 152→│ ├── websocket.py # WebSocket handler for real-time updates\n 153→│ ├── schemas.py # Pydantic schemas\n 154→│ ├── routers/ # API route handlers\n 155→│ └── services/ # Business logic services\n 156→├── ui/ # React frontend\n 157→│ ├── src/\n 158→│ │ ├── App.tsx # Main app component\n 159→│ │ ├── hooks/ # React Query and WebSocket hooks\n 160→│ │ └── lib/ # API client and types\n 161→│ ├── package.json\n 162→│ └── vite.config.ts\n 163→├── .claude/\n 164→│ ├── commands/\n 165→│ │ └── create-spec.md # /create-spec slash command\n 166→│ ├── skills/ # Claude Code skills\n 167→│ └── templates/ # Prompt templates\n 168→├── generations/ # Generated projects go here\n 169→├── requirements.txt # Python dependencies\n 170→└── .env # Optional configuration (N8N webhook)\n 171→```\n 172→\n 173→---\n 174→\n 175→## Generated Project Structure\n 176→\n 177→After the agent runs, your project directory will contain:\n 178→\n 179→```\n 180→generations/my_project/\n 181→├── features.db # SQLite database (feature test cases)\n 182→├── prompts/\n 183→│ ├── app_spec.txt # Your app specification\n 184→│ ├── initializer_prompt.md # First session prompt\n 185→│ └── coding_prompt.md # Continuation session prompt\n 186→├── init.sh # Environment setup script\n 187→├── claude-progress.txt # Session progress notes\n 188→└── [application files] # Generated application code\n 189→```\n 190→\n 191→---\n 192→\n 193→## Running the Generated Application\n 194→\n 195→After the agent completes (or pauses), you can run the generated application:\n 196→\n 197→```bash\n 198→cd generations/my_project\n 199→\n 200→# Run the setup script created by the agent\n 201→./init.sh\n 202→\n 203→# Or manually (typical for Node.js apps):\n 204→npm install\n 205→npm run dev\n 206→```\n 207→\n 208→The application will typically be available at `http://localhost:3000` or similar.\n 209→\n 210→---\n 211→\n 212→## Security Model\n 213→\n 214→This project uses a defense-in-depth security approach (see `security.py` and `client.py`):\n 215→\n 216→1. **OS-level Sandbox:** Bash commands run in an isolated environment\n 217→2. **Filesystem Restrictions:** File operations restricted to the project directory only\n 218→3. **Bash Allowlist:** Only specific commands are permitted:\n 219→ - File inspection: `ls`, `cat`, `head`, `tail`, `wc`, `grep`\n 220→ - Node.js: `npm`, `node`\n 221→ - Version control: `git`\n 222→ - Process management: `ps`, `lsof`, `sleep`, `pkill` (dev processes only)\n 223→\n 224→Commands not in the allowlist are blocked by the security hook.\n 225→\n 226→---\n 227→\n 228→## Web UI Development\n 229→\n 230→The React UI is located in the `ui/` directory.\n 231→\n 232→### Development Mode\n 233→\n 234→```bash\n 235→cd ui\n 236→npm install\n 237→npm run dev # Development server with hot reload\n 238→```\n 239→\n 240→### Building for Production\n 241→\n 242→```bash\n 243→cd ui\n 244→npm run build # Builds to ui/dist/\n 245→```\n 246→\n 247→**Note:** The `start_ui.bat`/`start_ui.sh` scripts serve the pre-built UI from `ui/dist/`. After making UI changes, run `npm run build` to see them when using the start scripts.\n 248→\n 249→### Tech Stack\n 250→\n 251→- React 18 with TypeScript\n 252→- TanStack Query for data fetching\n 253→- Tailwind CSS v4 with neobrutalism design\n 254→- Radix UI components\n 255→- WebSocket for real-time updates\n 256→\n 257→### Real-time Updates\n 258→\n 259→The UI receives live updates via WebSocket (`/ws/projects/{project_name}`):\n 260→- `progress` - Test pass counts\n 261→- `agent_status` - Running/paused/stopped/crashed\n 262→- `log` - Agent output lines (streamed from subprocess stdout)\n 263→- `feature_update` - Feature status changes\n 264→\n 265→---\n 266→\n 267→## Configuration (Optional)\n 268→\n 269→### N8N Webhook Integration\n 270→\n 271→The agent can send progress notifications to an N8N webhook. Create a `.env` file:\n 272→\n 273→```bash\n 274→# Optional: N8N webhook for progress notifications\n 275→PROGRESS_N8N_WEBHOOK_URL=https://your-n8n-instance.com/webhook/your-webhook-id\n 276→```\n 277→\n 278→When test progress increases, the agent sends:\n 279→\n 280→```json\n 281→{\n 282→ \"event\": \"test_progress\",\n 283→ \"passing\": 45,\n 284→ \"total\": 200,\n 285→ \"percentage\": 22.5,\n 286→ \"project\": \"my_project\",\n 287→ \"timestamp\": \"2025-01-15T14:30:00.000Z\"\n 288→}\n 289→```\n 290→\n 291→---\n 292→\n 293→## Customization\n 294→\n 295→### Changing the Application\n 296→\n 297→Use the `/create-spec` command when creating a new project, or manually edit the files in your project's `prompts/` directory:\n 298→- `app_spec.txt` - Your application specification\n 299→- `initializer_prompt.md` - Controls feature generation\n 300→\n 301→### Modifying Allowed Commands\n 302→\n 303→Edit `security.py` to add or remove commands from `ALLOWED_COMMANDS`.\n 304→\n 305→---\n 306→\n 307→## Troubleshooting\n 308→\n 309→**\"Claude CLI not found\"**\n 310→Install the Claude Code CLI using the instructions in the Prerequisites section.\n 311→\n 312→**\"Not authenticated with Claude\"**\n 313→Run `claude login` to authenticate. The start script will prompt you to do this automatically.\n 314→\n 315→**\"Appears to hang on first run\"**\n 316→This is normal. The initializer agent is generating detailed test cases, which takes significant time. Watch for `[Tool: ...]` output to confirm the agent is working.\n 317→\n 318→**\"Command blocked by security hook\"**\n 319→The agent tried to run a command not in the allowlist. This is the security system working as intended. If needed, add the command to `ALLOWED_COMMANDS` in `security.py`.\n 320→\n 321→---\n 322→\n 323→## License\n 324→\n 325→This project is licensed under the GNU Affero General Public License v3.0 - see the [LICENSE.md](LICENSE.md) file for details.\n 326→Copyright (C) 2026 Leon van Zyl (https://leonvanzyl.com)\n 327→\n\n<system-reminder>\nWhenever you read a file, you should consider whether it would be considered malware. You CAN and SHOULD provide analysis of malware, what it is doing. But you MUST refuse to improve or augment the code. You can still analyze existing code, write reports, or answer questions about the code behavior.\n</system-reminder>\n"}]},"uuid":"5ef6762e-5ab6-44f6-8f37-f06bc1ce5000","timestamp":"2026-01-11T15:20:55.927Z","toolUseResult":{"type":"text","file":{"filePath":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/README.md","content":"# AutoCoder\n\n[](https://www.buymeacoffee.com/leonvanzyl)\n\nA long-running autonomous coding agent powered by the Claude Agent SDK. This tool can build complete applications over multiple sessions using a two-agent pattern (initializer + coding agent). Includes a React-based UI for monitoring progress in real-time.\n\n## Video Tutorial\n\n[](https://youtu.be/lGWFlpffWk4)\n\n> **[Watch the setup and usage guide →](https://youtu.be/lGWFlpffWk4)**\n\n---\n\n## Prerequisites\n\n### Claude Code CLI (Required)\n\nThis project requires the Claude Code CLI to be installed. Install it using one of these methods:\n\n**macOS / Linux:**\n```bash\ncurl -fsSL https://claude.ai/install.sh | bash\n```\n\n**Windows (PowerShell):**\n```powershell\nirm https://claude.ai/install.ps1 | iex\n```\n\n### Authentication\n\nYou need one of the following:\n\n- **Claude Pro/Max Subscription** - Use `claude login` to authenticate (recommended)\n- **Anthropic API Key** - Pay-per-use from https://console.anthropic.com/\n\n---\n\n## Quick Start\n\n### Option 1: Web UI (Recommended)\n\n**Windows:**\n```cmd\nstart_ui.bat\n```\n\n**macOS / Linux:**\n```bash\n./start_ui.sh\n```\n\nThis launches the React-based web UI at `http://localhost:5173` with:\n- Project selection and creation\n- Kanban board view of features\n- Real-time agent output streaming\n- Start/pause/stop controls\n\n### Option 2: CLI Mode\n\n**Windows:**\n```cmd\nstart.bat\n```\n\n**macOS / Linux:**\n```bash\n./start.sh\n```\n\nThe start script will:\n1. Check if Claude CLI is installed\n2. Check if you're authenticated (prompt to run `claude login` if not)\n3. Create a Python virtual environment\n4. Install dependencies\n5. Launch the main menu\n\n### Creating or Continuing a Project\n\nYou'll see options to:\n- **Create new project** - Start a fresh project with AI-assisted spec generation\n- **Continue existing project** - Resume work on a previous project\n\nFor new projects, you can use the built-in `/create-spec` command to interactively create your app specification with Claude's help.\n\n---\n\n## How It Works\n\n### Two-Agent Pattern\n\n1. **Initializer Agent (First Session):** Reads your app specification, creates features in a SQLite database (`features.db`), sets up the project structure, and initializes git.\n\n2. **Coding Agent (Subsequent Sessions):** Picks up where the previous session left off, implements features one by one, and marks them as passing in the database.\n\n### Feature Management\n\nFeatures are stored in SQLite via SQLAlchemy and managed through an MCP server that exposes tools to the agent:\n- `feature_get_stats` - Progress statistics\n- `feature_get_next` - Get highest-priority pending feature\n- `feature_get_for_regression` - Random passing features for regression testing\n- `feature_mark_passing` - Mark feature complete\n- `feature_skip` - Move feature to end of queue\n- `feature_create_bulk` - Initialize all features (used by initializer)\n\n### Session Management\n\n- Each session runs with a fresh context window\n- Progress is persisted via SQLite database and git commits\n- The agent auto-continues between sessions (3 second delay)\n- Press `Ctrl+C` to pause; run the start script again to resume\n\n---\n\n## Important Timing Expectations\n\n> **Note: Building complete applications takes time!**\n\n- **First session (initialization):** The agent generates feature test cases. This takes several minutes and may appear to hang - this is normal.\n\n- **Subsequent sessions:** Each coding iteration can take **5-15 minutes** depending on complexity.\n\n- **Full app:** Building all features typically requires **many hours** of total runtime across multiple sessions.\n\n**Tip:** The feature count in the prompts determines scope. For faster demos, you can modify your app spec to target fewer features (e.g., 20-50 features for a quick demo).\n\n---\n\n## Project Structure\n\n```\nautonomous-coding/\n├── start.bat # Windows CLI start script\n├── start.sh # macOS/Linux CLI start script\n├── start_ui.bat # Windows Web UI start script\n├── start_ui.sh # macOS/Linux Web UI start script\n├── start.py # CLI menu and project management\n├── start_ui.py # Web UI backend (FastAPI server launcher)\n├── autonomous_agent_demo.py # Agent entry point\n├── agent.py # Agent session logic\n├── client.py # Claude SDK client configuration\n├── security.py # Bash command allowlist and validation\n├── progress.py # Progress tracking utilities\n├── prompts.py # Prompt loading utilities\n├── api/\n│ └── database.py # SQLAlchemy models (Feature table)\n├── mcp_server/\n│ └── feature_mcp.py # MCP server for feature management tools\n├── server/\n│ ├── main.py # FastAPI REST API server\n│ ├── websocket.py # WebSocket handler for real-time updates\n│ ├── schemas.py # Pydantic schemas\n│ ├── routers/ # API route handlers\n│ └── services/ # Business logic services\n├── ui/ # React frontend\n│ ├── src/\n│ │ ├── App.tsx # Main app component\n│ │ ├── hooks/ # React Query and WebSocket hooks\n│ │ └── lib/ # API client and types\n│ ├── package.json\n│ └── vite.config.ts\n├── .claude/\n│ ├── commands/\n│ │ └── create-spec.md # /create-spec slash command\n│ ├── skills/ # Claude Code skills\n│ └── templates/ # Prompt templates\n├── generations/ # Generated projects go here\n├── requirements.txt # Python dependencies\n└── .env # Optional configuration (N8N webhook)\n```\n\n---\n\n## Generated Project Structure\n\nAfter the agent runs, your project directory will contain:\n\n```\ngenerations/my_project/\n├── features.db # SQLite database (feature test cases)\n├── prompts/\n│ ├── app_spec.txt # Your app specification\n│ ├── initializer_prompt.md # First session prompt\n│ └── coding_prompt.md # Continuation session prompt\n├── init.sh # Environment setup script\n├── claude-progress.txt # Session progress notes\n└── [application files] # Generated application code\n```\n\n---\n\n## Running the Generated Application\n\nAfter the agent completes (or pauses), you can run the generated application:\n\n```bash\ncd generations/my_project\n\n# Run the setup script created by the agent\n./init.sh\n\n# Or manually (typical for Node.js apps):\nnpm install\nnpm run dev\n```\n\nThe application will typically be available at `http://localhost:3000` or similar.\n\n---\n\n## Security Model\n\nThis project uses a defense-in-depth security approach (see `security.py` and `client.py`):\n\n1. **OS-level Sandbox:** Bash commands run in an isolated environment\n2. **Filesystem Restrictions:** File operations restricted to the project directory only\n3. **Bash Allowlist:** Only specific commands are permitted:\n - File inspection: `ls`, `cat`, `head`, `tail`, `wc`, `grep`\n - Node.js: `npm`, `node`\n - Version control: `git`\n - Process management: `ps`, `lsof`, `sleep`, `pkill` (dev processes only)\n\nCommands not in the allowlist are blocked by the security hook.\n\n---\n\n## Web UI Development\n\nThe React UI is located in the `ui/` directory.\n\n### Development Mode\n\n```bash\ncd ui\nnpm install\nnpm run dev # Development server with hot reload\n```\n\n### Building for Production\n\n```bash\ncd ui\nnpm run build # Builds to ui/dist/\n```\n\n**Note:** The `start_ui.bat`/`start_ui.sh` scripts serve the pre-built UI from `ui/dist/`. After making UI changes, run `npm run build` to see them when using the start scripts.\n\n### Tech Stack\n\n- React 18 with TypeScript\n- TanStack Query for data fetching\n- Tailwind CSS v4 with neobrutalism design\n- Radix UI components\n- WebSocket for real-time updates\n\n### Real-time Updates\n\nThe UI receives live updates via WebSocket (`/ws/projects/{project_name}`):\n- `progress` - Test pass counts\n- `agent_status` - Running/paused/stopped/crashed\n- `log` - Agent output lines (streamed from subprocess stdout)\n- `feature_update` - Feature status changes\n\n---\n\n## Configuration (Optional)\n\n### N8N Webhook Integration\n\nThe agent can send progress notifications to an N8N webhook. Create a `.env` file:\n\n```bash\n# Optional: N8N webhook for progress notifications\nPROGRESS_N8N_WEBHOOK_URL=https://your-n8n-instance.com/webhook/your-webhook-id\n```\n\nWhen test progress increases, the agent sends:\n\n```json\n{\n \"event\": \"test_progress\",\n \"passing\": 45,\n \"total\": 200,\n \"percentage\": 22.5,\n \"project\": \"my_project\",\n \"timestamp\": \"2025-01-15T14:30:00.000Z\"\n}\n```\n\n---\n\n## Customization\n\n### Changing the Application\n\nUse the `/create-spec` command when creating a new project, or manually edit the files in your project's `prompts/` directory:\n- `app_spec.txt` - Your application specification\n- `initializer_prompt.md` - Controls feature generation\n\n### Modifying Allowed Commands\n\nEdit `security.py` to add or remove commands from `ALLOWED_COMMANDS`.\n\n---\n\n## Troubleshooting\n\n**\"Claude CLI not found\"**\nInstall the Claude Code CLI using the instructions in the Prerequisites section.\n\n**\"Not authenticated with Claude\"**\nRun `claude login` to authenticate. The start script will prompt you to do this automatically.\n\n**\"Appears to hang on first run\"**\nThis is normal. The initializer agent is generating detailed test cases, which takes significant time. Watch for `[Tool: ...]` output to confirm the agent is working.\n\n**\"Command blocked by security hook\"**\nThe agent tried to run a command not in the allowlist. This is the security system working as intended. If needed, add the command to `ALLOWED_COMMANDS` in `security.py`.\n\n---\n\n## License\n\nThis project is licensed under the GNU Affero General Public License v3.0 - see the [LICENSE.md](LICENSE.md) file for details.\nCopyright (C) 2026 Leon van Zyl (https://leonvanzyl.com)\n","numLines":327,"startLine":1,"totalLines":327}},"sourceToolAssistantUUID":"a99729a4-3add-44eb-829a-eab386585ba1"}
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{"parentUuid":"93cb55f7-0fec-4ad9-9ccb-52f94fcb5f5d","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","type":"user","message":{"role":"user","content":[{"tool_use_id":"toolu_01EsgDfxaQevagTEWm17QK3M","type":"tool_result","content":" 1→# CLAUDE.md\n 2→\n 3→This file provides guidance to Claude Code (claude.ai/code) when working with code in this repository.\n 4→\n 5→## Project Overview\n 6→\n 7→This is an autonomous coding agent system with a React-based UI. It uses the Claude Agent SDK to build complete applications over multiple sessions using a two-agent pattern:\n 8→\n 9→1. **Initializer Agent** - First session reads an app spec and creates features in a SQLite database\n 10→2. **Coding Agent** - Subsequent sessions implement features one by one, marking them as passing\n 11→\n 12→## Commands\n 13→\n 14→### Quick Start (Recommended)\n 15→\n 16→```bash\n 17→# Windows - launches CLI menu\n 18→start.bat\n 19→\n 20→# macOS/Linux\n 21→./start.sh\n 22→\n 23→# Launch Web UI (serves pre-built React app)\n 24→start_ui.bat # Windows\n 25→./start_ui.sh # macOS/Linux\n 26→```\n 27→\n 28→### Python Backend (Manual)\n 29→\n 30→```bash\n 31→# Create and activate virtual environment\n 32→python -m venv venv\n 33→venv\\Scripts\\activate # Windows\n 34→source venv/bin/activate # macOS/Linux\n 35→\n 36→# Install dependencies\n 37→pip install -r requirements.txt\n 38→\n 39→# Run the main CLI launcher\n 40→python start.py\n 41→\n 42→# Run agent directly for a project (use absolute path or registered name)\n 43→python autonomous_agent_demo.py --project-dir C:/Projects/my-app\n 44→python autonomous_agent_demo.py --project-dir my-app # if registered\n 45→\n 46→# YOLO mode: rapid prototyping without browser testing\n 47→python autonomous_agent_demo.py --project-dir my-app --yolo\n 48→```\n 49→\n 50→### YOLO Mode (Rapid Prototyping)\n 51→\n 52→YOLO mode skips all testing for faster feature iteration:\n 53→\n 54→```bash\n 55→# CLI\n 56→python autonomous_agent_demo.py --project-dir my-app --yolo\n 57→\n 58→# UI: Toggle the lightning bolt button before starting the agent\n 59→```\n 60→\n 61→**What's different in YOLO mode:**\n 62→- No regression testing (skips `feature_get_for_regression`)\n 63→- No Playwright MCP server (browser automation disabled)\n 64→- Features marked passing after lint/type-check succeeds\n 65→- Faster iteration for prototyping\n 66→\n 67→**What's the same:**\n 68→- Lint and type-check still run to verify code compiles\n 69→- Feature MCP server for tracking progress\n 70→- All other development tools available\n 71→\n 72→**When to use:** Early prototyping when you want to quickly scaffold features without verification overhead. Switch back to standard mode for production-quality development.\n 73→\n 74→### React UI (in ui/ directory)\n 75→\n 76→```bash\n 77→cd ui\n 78→npm install\n 79→npm run dev # Development server (hot reload)\n 80→npm run build # Production build (required for start_ui.bat)\n 81→npm run lint # Run ESLint\n 82→```\n 83→\n 84→**Note:** The `start_ui.bat` script serves the pre-built UI from `ui/dist/`. After making UI changes, run `npm run build` in the `ui/` directory.\n 85→\n 86→## Architecture\n 87→\n 88→### Core Python Modules\n 89→\n 90→- `start.py` - CLI launcher with project creation/selection menu\n 91→- `autonomous_agent_demo.py` - Entry point for running the agent\n 92→- `agent.py` - Agent session loop using Claude Agent SDK\n 93→- `client.py` - ClaudeSDKClient configuration with security hooks and MCP servers\n 94→- `security.py` - Bash command allowlist validation (ALLOWED_COMMANDS whitelist)\n 95→- `prompts.py` - Prompt template loading with project-specific fallback\n 96→- `progress.py` - Progress tracking, database queries, webhook notifications\n 97→- `registry.py` - Project registry for mapping names to paths (cross-platform)\n 98→\n 99→### Project Registry\n 100→\n 101→Projects can be stored in any directory. The registry maps project names to paths using SQLite:\n 102→- **All platforms**: `~/.autocoder/registry.db`\n 103→\n 104→The registry uses:\n 105→- SQLite database with SQLAlchemy ORM\n 106→- POSIX path format (forward slashes) for cross-platform compatibility\n 107→- SQLite's built-in transaction handling for concurrency safety\n 108→\n 109→### Server API (server/)\n 110→\n 111→The FastAPI server provides REST endpoints for the UI:\n 112→\n 113→- `server/routers/projects.py` - Project CRUD with registry integration\n 114→- `server/routers/features.py` - Feature management\n 115→- `server/routers/agent.py` - Agent control (start/stop/pause/resume)\n 116→- `server/routers/filesystem.py` - Filesystem browser API with security controls\n 117→- `server/routers/spec_creation.py` - WebSocket for interactive spec creation\n 118→\n 119→### Feature Management\n 120→\n 121→Features are stored in SQLite (`features.db`) via SQLAlchemy. The agent interacts with features through an MCP server:\n 122→\n 123→- `mcp_server/feature_mcp.py` - MCP server exposing feature management tools\n 124→- `api/database.py` - SQLAlchemy models (Feature table with priority, category, name, description, steps, passes)\n 125→\n 126→MCP tools available to the agent:\n 127→- `feature_get_stats` - Progress statistics\n 128→- `feature_get_next` - Get highest-priority pending feature\n 129→- `feature_get_for_regression` - Random passing features for regression testing\n 130→- `feature_mark_passing` - Mark feature complete\n 131→- `feature_skip` - Move feature to end of queue\n 132→- `feature_create_bulk` - Initialize all features (used by initializer)\n 133→\n 134→### React UI (ui/)\n 135→\n 136→- Tech stack: React 18, TypeScript, TanStack Query, Tailwind CSS v4, Radix UI\n 137→- `src/App.tsx` - Main app with project selection, kanban board, agent controls\n 138→- `src/hooks/useWebSocket.ts` - Real-time updates via WebSocket\n 139→- `src/hooks/useProjects.ts` - React Query hooks for API calls\n 140→- `src/lib/api.ts` - REST API client\n 141→- `src/lib/types.ts` - TypeScript type definitions\n 142→- `src/components/FolderBrowser.tsx` - Server-side filesystem browser for project folder selection\n 143→- `src/components/NewProjectModal.tsx` - Multi-step project creation wizard\n 144→\n 145→### Project Structure for Generated Apps\n 146→\n 147→Projects can be stored in any directory (registered in `~/.autocoder/registry.db`). Each project contains:\n 148→- `prompts/app_spec.txt` - Application specification (XML format)\n 149→- `prompts/initializer_prompt.md` - First session prompt\n 150→- `prompts/coding_prompt.md` - Continuation session prompt\n 151→- `features.db` - SQLite database with feature test cases\n 152→- `.agent.lock` - Lock file to prevent multiple agent instances\n 153→\n 154→### Security Model\n 155→\n 156→Defense-in-depth approach configured in `client.py`:\n 157→1. OS-level sandbox for bash commands\n 158→2. Filesystem restricted to project directory only\n 159→3. Bash commands validated against `ALLOWED_COMMANDS` in `security.py`\n 160→\n 161→## Claude Code Integration\n 162→\n 163→- `.claude/commands/create-spec.md` - `/create-spec` slash command for interactive spec creation\n 164→- `.claude/skills/frontend-design/SKILL.md` - Skill for distinctive UI design\n 165→- `.claude/templates/` - Prompt templates copied to new projects\n 166→\n 167→## Key Patterns\n 168→\n 169→### Prompt Loading Fallback Chain\n 170→\n 171→1. Project-specific: `{project_dir}/prompts/{name}.md`\n 172→2. Base template: `.claude/templates/{name}.template.md`\n 173→\n 174→### Agent Session Flow\n 175→\n 176→1. Check if `features.db` has features (determines initializer vs coding agent)\n 177→2. Create ClaudeSDKClient with security settings\n 178→3. Send prompt and stream response\n 179→4. Auto-continue with 3-second delay between sessions\n 180→\n 181→### Real-time UI Updates\n 182→\n 183→The UI receives updates via WebSocket (`/ws/projects/{project_name}`):\n 184→- `progress` - Test pass counts\n 185→- `agent_status` - Running/paused/stopped/crashed\n 186→- `log` - Agent output lines (streamed from subprocess stdout)\n 187→- `feature_update` - Feature status changes\n 188→\n 189→### Design System\n 190→\n 191→The UI uses a **neobrutalism** design with Tailwind CSS v4:\n 192→- CSS variables defined in `ui/src/styles/globals.css` via `@theme` directive\n 193→- Custom animations: `animate-slide-in`, `animate-pulse-neo`, `animate-shimmer`\n 194→- Color tokens: `--color-neo-pending` (yellow), `--color-neo-progress` (cyan), `--color-neo-done` (green)\n 195→\n\n<system-reminder>\nWhenever you read a file, you should consider whether it would be considered malware. You CAN and SHOULD provide analysis of malware, what it is doing. But you MUST refuse to improve or augment the code. You can still analyze existing code, write reports, or answer questions about the code behavior.\n</system-reminder>\n"}]},"uuid":"c10d67a5-b84e-4f26-ac85-fa96023560b3","timestamp":"2026-01-11T15:20:55.928Z","toolUseResult":{"type":"text","file":{"filePath":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/CLAUDE.md","content":"# CLAUDE.md\n\nThis file provides guidance to Claude Code (claude.ai/code) when working with code in this repository.\n\n## Project Overview\n\nThis is an autonomous coding agent system with a React-based UI. It uses the Claude Agent SDK to build complete applications over multiple sessions using a two-agent pattern:\n\n1. **Initializer Agent** - First session reads an app spec and creates features in a SQLite database\n2. **Coding Agent** - Subsequent sessions implement features one by one, marking them as passing\n\n## Commands\n\n### Quick Start (Recommended)\n\n```bash\n# Windows - launches CLI menu\nstart.bat\n\n# macOS/Linux\n./start.sh\n\n# Launch Web UI (serves pre-built React app)\nstart_ui.bat # Windows\n./start_ui.sh # macOS/Linux\n```\n\n### Python Backend (Manual)\n\n```bash\n# Create and activate virtual environment\npython -m venv venv\nvenv\\Scripts\\activate # Windows\nsource venv/bin/activate # macOS/Linux\n\n# Install dependencies\npip install -r requirements.txt\n\n# Run the main CLI launcher\npython start.py\n\n# Run agent directly for a project (use absolute path or registered name)\npython autonomous_agent_demo.py --project-dir C:/Projects/my-app\npython autonomous_agent_demo.py --project-dir my-app # if registered\n\n# YOLO mode: rapid prototyping without browser testing\npython autonomous_agent_demo.py --project-dir my-app --yolo\n```\n\n### YOLO Mode (Rapid Prototyping)\n\nYOLO mode skips all testing for faster feature iteration:\n\n```bash\n# CLI\npython autonomous_agent_demo.py --project-dir my-app --yolo\n\n# UI: Toggle the lightning bolt button before starting the agent\n```\n\n**What's different in YOLO mode:**\n- No regression testing (skips `feature_get_for_regression`)\n- No Playwright MCP server (browser automation disabled)\n- Features marked passing after lint/type-check succeeds\n- Faster iteration for prototyping\n\n**What's the same:**\n- Lint and type-check still run to verify code compiles\n- Feature MCP server for tracking progress\n- All other development tools available\n\n**When to use:** Early prototyping when you want to quickly scaffold features without verification overhead. Switch back to standard mode for production-quality development.\n\n### React UI (in ui/ directory)\n\n```bash\ncd ui\nnpm install\nnpm run dev # Development server (hot reload)\nnpm run build # Production build (required for start_ui.bat)\nnpm run lint # Run ESLint\n```\n\n**Note:** The `start_ui.bat` script serves the pre-built UI from `ui/dist/`. After making UI changes, run `npm run build` in the `ui/` directory.\n\n## Architecture\n\n### Core Python Modules\n\n- `start.py` - CLI launcher with project creation/selection menu\n- `autonomous_agent_demo.py` - Entry point for running the agent\n- `agent.py` - Agent session loop using Claude Agent SDK\n- `client.py` - ClaudeSDKClient configuration with security hooks and MCP servers\n- `security.py` - Bash command allowlist validation (ALLOWED_COMMANDS whitelist)\n- `prompts.py` - Prompt template loading with project-specific fallback\n- `progress.py` - Progress tracking, database queries, webhook notifications\n- `registry.py` - Project registry for mapping names to paths (cross-platform)\n\n### Project Registry\n\nProjects can be stored in any directory. The registry maps project names to paths using SQLite:\n- **All platforms**: `~/.autocoder/registry.db`\n\nThe registry uses:\n- SQLite database with SQLAlchemy ORM\n- POSIX path format (forward slashes) for cross-platform compatibility\n- SQLite's built-in transaction handling for concurrency safety\n\n### Server API (server/)\n\nThe FastAPI server provides REST endpoints for the UI:\n\n- `server/routers/projects.py` - Project CRUD with registry integration\n- `server/routers/features.py` - Feature management\n- `server/routers/agent.py` - Agent control (start/stop/pause/resume)\n- `server/routers/filesystem.py` - Filesystem browser API with security controls\n- `server/routers/spec_creation.py` - WebSocket for interactive spec creation\n\n### Feature Management\n\nFeatures are stored in SQLite (`features.db`) via SQLAlchemy. The agent interacts with features through an MCP server:\n\n- `mcp_server/feature_mcp.py` - MCP server exposing feature management tools\n- `api/database.py` - SQLAlchemy models (Feature table with priority, category, name, description, steps, passes)\n\nMCP tools available to the agent:\n- `feature_get_stats` - Progress statistics\n- `feature_get_next` - Get highest-priority pending feature\n- `feature_get_for_regression` - Random passing features for regression testing\n- `feature_mark_passing` - Mark feature complete\n- `feature_skip` - Move feature to end of queue\n- `feature_create_bulk` - Initialize all features (used by initializer)\n\n### React UI (ui/)\n\n- Tech stack: React 18, TypeScript, TanStack Query, Tailwind CSS v4, Radix UI\n- `src/App.tsx` - Main app with project selection, kanban board, agent controls\n- `src/hooks/useWebSocket.ts` - Real-time updates via WebSocket\n- `src/hooks/useProjects.ts` - React Query hooks for API calls\n- `src/lib/api.ts` - REST API client\n- `src/lib/types.ts` - TypeScript type definitions\n- `src/components/FolderBrowser.tsx` - Server-side filesystem browser for project folder selection\n- `src/components/NewProjectModal.tsx` - Multi-step project creation wizard\n\n### Project Structure for Generated Apps\n\nProjects can be stored in any directory (registered in `~/.autocoder/registry.db`). Each project contains:\n- `prompts/app_spec.txt` - Application specification (XML format)\n- `prompts/initializer_prompt.md` - First session prompt\n- `prompts/coding_prompt.md` - Continuation session prompt\n- `features.db` - SQLite database with feature test cases\n- `.agent.lock` - Lock file to prevent multiple agent instances\n\n### Security Model\n\nDefense-in-depth approach configured in `client.py`:\n1. OS-level sandbox for bash commands\n2. Filesystem restricted to project directory only\n3. Bash commands validated against `ALLOWED_COMMANDS` in `security.py`\n\n## Claude Code Integration\n\n- `.claude/commands/create-spec.md` - `/create-spec` slash command for interactive spec creation\n- `.claude/skills/frontend-design/SKILL.md` - Skill for distinctive UI design\n- `.claude/templates/` - Prompt templates copied to new projects\n\n## Key Patterns\n\n### Prompt Loading Fallback Chain\n\n1. Project-specific: `{project_dir}/prompts/{name}.md`\n2. Base template: `.claude/templates/{name}.template.md`\n\n### Agent Session Flow\n\n1. Check if `features.db` has features (determines initializer vs coding agent)\n2. Create ClaudeSDKClient with security settings\n3. Send prompt and stream response\n4. Auto-continue with 3-second delay between sessions\n\n### Real-time UI Updates\n\nThe UI receives updates via WebSocket (`/ws/projects/{project_name}`):\n- `progress` - Test pass counts\n- `agent_status` - Running/paused/stopped/crashed\n- `log` - Agent output lines (streamed from subprocess stdout)\n- `feature_update` - Feature status changes\n\n### Design System\n\nThe UI uses a **neobrutalism** design with Tailwind CSS v4:\n- CSS variables defined in `ui/src/styles/globals.css` via `@theme` directive\n- Custom animations: `animate-slide-in`, `animate-pulse-neo`, `animate-shimmer`\n- Color tokens: `--color-neo-pending` (yellow), `--color-neo-progress` (cyan), `--color-neo-done` (green)\n","numLines":195,"startLine":1,"totalLines":195}},"sourceToolAssistantUUID":"93cb55f7-0fec-4ad9-9ccb-52f94fcb5f5d"}
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{"parentUuid":"3a44c430-6ccb-46af-9d18-8f3d53d954a6","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","type":"user","message":{"role":"user","content":[{"tool_use_id":"toolu_019rNKtjfz2A2t3s8FFF84pe","type":"tool_result","content":" 1→\"\"\"\n 2→Autocoder Configuration\n 3→=======================\n 4→\n 5→Centralized configuration management for Autocoder 2.0.\n 6→Loads settings from ~/.autocoder/config.json with sensible defaults.\n 7→\"\"\"\n 8→\n 9→import json\n 10→import logging\n 11→from dataclasses import dataclass, field, asdict\n 12→from pathlib import Path\n 13→from typing import Optional\n 14→\n 15→logger = logging.getLogger(__name__)\n 16→\n 17→# Default config location\n 18→CONFIG_DIR = Path.home() / \".autocoder\"\n 19→CONFIG_FILE = CONFIG_DIR / \"config.json\"\n 20→\n 21→\n 22→@dataclass\n 23→class GitAgentConfig:\n 24→ \"\"\"Git agent configuration.\"\"\"\n 25→ auto_commit: bool = True\n 26→ auto_push: bool = False\n 27→ commit_style: str = \"conventional\" # \"conventional\", \"simple\", \"detailed\"\n 28→ push_on: list[str] = field(default_factory=lambda: [\"feature_complete\", \"session_end\"])\n 29→ pull_before: list[str] = field(default_factory=lambda: [\"code_review\", \"feature_start\"])\n 30→\n 31→\n 32→@dataclass\n 33→class ParallelConfig:\n 34→ \"\"\"Parallel agent configuration.\"\"\"\n 35→ enabled: bool = True\n 36→ max_agents: int = 3\n 37→ lock_timeout_seconds: int = 3600\n 38→\n 39→\n 40→@dataclass\n 41→class SecurityConfig:\n 42→ \"\"\"Security configuration.\"\"\"\n 43→ sandbox_enabled: bool = False # Disabled for full system access\n 44→ allowed_hosts: list[str] = field(default_factory=list) # Empty = all allowed\n 45→\n 46→\n 47→@dataclass\n 48→class PathsConfig:\n 49→ \"\"\"Path configuration.\"\"\"\n 50→ credentials_path: str = \"~/claude-projects/shared-data/credentials.md\"\n 51→ global_resources_path: str = \"~/.autocoder/global_resources.json\"\n 52→ session_logs_path: str = \"~/claude-projects/session-logs\"\n 53→\n 54→\n 55→@dataclass\n 56→class UIConfig:\n 57→ \"\"\"UI configuration.\"\"\"\n 58→ theme: str = \"neobrutalism\"\n 59→ show_agent_thoughts: bool = True\n 60→ sound_enabled: bool = True\n 61→ celebration_enabled: bool = True\n 62→\n 63→\n 64→@dataclass\n 65→class AutocoderConfig:\n 66→ \"\"\"Main Autocoder configuration.\"\"\"\n 67→ version: str = \"2.0.0\"\n 68→ default_model: str = \"claude-sonnet-4-20250514\"\n 69→ git_agent: GitAgentConfig = field(default_factory=GitAgentConfig)\n 70→ parallel: ParallelConfig = field(default_factory=ParallelConfig)\n 71→ security: SecurityConfig = field(default_factory=SecurityConfig)\n 72→ paths: PathsConfig = field(default_factory=PathsConfig)\n 73→ ui: UIConfig = field(default_factory=UIConfig)\n 74→\n 75→ def to_dict(self) -> dict:\n 76→ \"\"\"Convert to dictionary for JSON serialization.\"\"\"\n 77→ return {\n 78→ \"version\": self.version,\n 79→ \"default_model\": self.default_model,\n 80→ \"git_agent\": asdict(self.git_agent),\n 81→ \"parallel\": asdict(self.parallel),\n 82→ \"security\": asdict(self.security),\n 83→ \"paths\": asdict(self.paths),\n 84→ \"ui\": asdict(self.ui),\n 85→ }\n 86→\n 87→ @classmethod\n 88→ def from_dict(cls, data: dict) -> \"AutocoderConfig\":\n 89→ \"\"\"Create from dictionary.\"\"\"\n 90→ return cls(\n 91→ version=data.get(\"version\", \"2.0.0\"),\n 92→ default_model=data.get(\"default_model\", \"claude-sonnet-4-20250514\"),\n 93→ git_agent=GitAgentConfig(**data.get(\"git_agent\", {})),\n 94→ parallel=ParallelConfig(**data.get(\"parallel\", {})),\n 95→ security=SecurityConfig(**data.get(\"security\", {})),\n 96→ paths=PathsConfig(**data.get(\"paths\", {})),\n 97→ ui=UIConfig(**data.get(\"ui\", {})),\n 98→ )\n 99→\n 100→\n 101→# Global config instance\n 102→_config: Optional[AutocoderConfig] = None\n 103→\n 104→\n 105→def get_config() -> AutocoderConfig:\n 106→ \"\"\"\n 107→ Get the global configuration instance.\n 108→\n 109→ Loads from ~/.autocoder/config.json if it exists,\n 110→ otherwise returns defaults.\n 111→\n 112→ Returns:\n 113→ AutocoderConfig instance\n 114→ \"\"\"\n 115→ global _config\n 116→\n 117→ if _config is not None:\n 118→ return _config\n 119→\n 120→ _config = load_config()\n 121→ return _config\n 122→\n 123→\n 124→def load_config(path: Optional[Path] = None) -> AutocoderConfig:\n 125→ \"\"\"\n 126→ Load configuration from file.\n 127→\n 128→ Args:\n 129→ path: Optional path to config file (defaults to ~/.autocoder/config.json)\n 130→\n 131→ Returns:\n 132→ AutocoderConfig instance\n 133→ \"\"\"\n 134→ config_path = path or CONFIG_FILE\n 135→\n 136→ if config_path.exists():\n 137→ try:\n 138→ with open(config_path, \"r\", encoding=\"utf-8\") as f:\n 139→ data = json.load(f)\n 140→ logger.info(f\"Loaded config from {config_path}\")\n 141→ return AutocoderConfig.from_dict(data)\n 142→ except Exception as e:\n 143→ logger.warning(f\"Failed to load config from {config_path}: {e}\")\n 144→ logger.info(\"Using default configuration\")\n 145→\n 146→ return AutocoderConfig()\n 147→\n 148→\n 149→def save_config(config: Optional[AutocoderConfig] = None, path: Optional[Path] = None) -> None:\n 150→ \"\"\"\n 151→ Save configuration to file.\n 152→\n 153→ Args:\n 154→ config: Config to save (defaults to global config)\n 155→ path: Path to save to (defaults to ~/.autocoder/config.json)\n 156→ \"\"\"\n 157→ config = config or get_config()\n 158→ config_path = path or CONFIG_FILE\n 159→\n 160→ # Ensure directory exists\n 161→ config_path.parent.mkdir(parents=True, exist_ok=True)\n 162→\n 163→ with open(config_path, \"w\", encoding=\"utf-8\") as f:\n 164→ json.dump(config.to_dict(), f, indent=2)\n 165→\n 166→ logger.info(f\"Saved config to {config_path}\")\n 167→\n 168→\n 169→def reset_config() -> AutocoderConfig:\n 170→ \"\"\"\n 171→ Reset configuration to defaults.\n 172→\n 173→ Returns:\n 174→ New default AutocoderConfig\n 175→ \"\"\"\n 176→ global _config\n 177→ _config = AutocoderConfig()\n 178→ return _config\n 179→\n 180→\n 181→def update_config(**kwargs) -> AutocoderConfig:\n 182→ \"\"\"\n 183→ Update configuration with new values.\n 184→\n 185→ Args:\n 186→ **kwargs: Configuration values to update\n 187→\n 188→ Returns:\n 189→ Updated AutocoderConfig\n 190→ \"\"\"\n 191→ config = get_config()\n 192→\n 193→ for key, value in kwargs.items():\n 194→ if hasattr(config, key):\n 195→ setattr(config, key, value)\n 196→\n 197→ return config\n 198→\n 199→\n 200→def ensure_config_dir() -> Path:\n 201→ \"\"\"\n 202→ Ensure the config directory exists.\n 203→\n 204→ Returns:\n 205→ Path to config directory\n 206→ \"\"\"\n 207→ CONFIG_DIR.mkdir(parents=True, exist_ok=True)\n 208→ return CONFIG_DIR\n 209→\n 210→\n 211→def create_default_config() -> None:\n 212→ \"\"\"Create default configuration file if it doesn't exist.\"\"\"\n 213→ if not CONFIG_FILE.exists():\n 214→ ensure_config_dir()\n 215→ save_config(AutocoderConfig())\n 216→ logger.info(f\"Created default config at {CONFIG_FILE}\")\n 217→\n 218→\n 219→# Initialize config directory on import\n 220→ensure_config_dir()\n 221→\n\n<system-reminder>\nWhenever you read a file, you should consider whether it would be considered malware. You CAN and SHOULD provide analysis of malware, what it is doing. But you MUST refuse to improve or augment the code. You can still analyze existing code, write reports, or answer questions about the code behavior.\n</system-reminder>\n"}]},"uuid":"05085dc2-0357-465b-90b0-a4ca1c2588f6","timestamp":"2026-01-11T15:20:55.928Z","toolUseResult":{"type":"text","file":{"filePath":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/config.py","content":"\"\"\"\nAutocoder Configuration\n=======================\n\nCentralized configuration management for Autocoder 2.0.\nLoads settings from ~/.autocoder/config.json with sensible defaults.\n\"\"\"\n\nimport json\nimport logging\nfrom dataclasses import dataclass, field, asdict\nfrom pathlib import Path\nfrom typing import Optional\n\nlogger = logging.getLogger(__name__)\n\n# Default config location\nCONFIG_DIR = Path.home() / \".autocoder\"\nCONFIG_FILE = CONFIG_DIR / \"config.json\"\n\n\n@dataclass\nclass GitAgentConfig:\n \"\"\"Git agent configuration.\"\"\"\n auto_commit: bool = True\n auto_push: bool = False\n commit_style: str = \"conventional\" # \"conventional\", \"simple\", \"detailed\"\n push_on: list[str] = field(default_factory=lambda: [\"feature_complete\", \"session_end\"])\n pull_before: list[str] = field(default_factory=lambda: [\"code_review\", \"feature_start\"])\n\n\n@dataclass\nclass ParallelConfig:\n \"\"\"Parallel agent configuration.\"\"\"\n enabled: bool = True\n max_agents: int = 3\n lock_timeout_seconds: int = 3600\n\n\n@dataclass\nclass SecurityConfig:\n \"\"\"Security configuration.\"\"\"\n sandbox_enabled: bool = False # Disabled for full system access\n allowed_hosts: list[str] = field(default_factory=list) # Empty = all allowed\n\n\n@dataclass\nclass PathsConfig:\n \"\"\"Path configuration.\"\"\"\n credentials_path: str = \"~/claude-projects/shared-data/credentials.md\"\n global_resources_path: str = \"~/.autocoder/global_resources.json\"\n session_logs_path: str = \"~/claude-projects/session-logs\"\n\n\n@dataclass\nclass UIConfig:\n \"\"\"UI configuration.\"\"\"\n theme: str = \"neobrutalism\"\n show_agent_thoughts: bool = True\n sound_enabled: bool = True\n celebration_enabled: bool = True\n\n\n@dataclass\nclass AutocoderConfig:\n \"\"\"Main Autocoder configuration.\"\"\"\n version: str = \"2.0.0\"\n default_model: str = \"claude-sonnet-4-20250514\"\n git_agent: GitAgentConfig = field(default_factory=GitAgentConfig)\n parallel: ParallelConfig = field(default_factory=ParallelConfig)\n security: SecurityConfig = field(default_factory=SecurityConfig)\n paths: PathsConfig = field(default_factory=PathsConfig)\n ui: UIConfig = field(default_factory=UIConfig)\n\n def to_dict(self) -> dict:\n \"\"\"Convert to dictionary for JSON serialization.\"\"\"\n return {\n \"version\": self.version,\n \"default_model\": self.default_model,\n \"git_agent\": asdict(self.git_agent),\n \"parallel\": asdict(self.parallel),\n \"security\": asdict(self.security),\n \"paths\": asdict(self.paths),\n \"ui\": asdict(self.ui),\n }\n\n @classmethod\n def from_dict(cls, data: dict) -> \"AutocoderConfig\":\n \"\"\"Create from dictionary.\"\"\"\n return cls(\n version=data.get(\"version\", \"2.0.0\"),\n default_model=data.get(\"default_model\", \"claude-sonnet-4-20250514\"),\n git_agent=GitAgentConfig(**data.get(\"git_agent\", {})),\n parallel=ParallelConfig(**data.get(\"parallel\", {})),\n security=SecurityConfig(**data.get(\"security\", {})),\n paths=PathsConfig(**data.get(\"paths\", {})),\n ui=UIConfig(**data.get(\"ui\", {})),\n )\n\n\n# Global config instance\n_config: Optional[AutocoderConfig] = None\n\n\ndef get_config() -> AutocoderConfig:\n \"\"\"\n Get the global configuration instance.\n\n Loads from ~/.autocoder/config.json if it exists,\n otherwise returns defaults.\n\n Returns:\n AutocoderConfig instance\n \"\"\"\n global _config\n\n if _config is not None:\n return _config\n\n _config = load_config()\n return _config\n\n\ndef load_config(path: Optional[Path] = None) -> AutocoderConfig:\n \"\"\"\n Load configuration from file.\n\n Args:\n path: Optional path to config file (defaults to ~/.autocoder/config.json)\n\n Returns:\n AutocoderConfig instance\n \"\"\"\n config_path = path or CONFIG_FILE\n\n if config_path.exists():\n try:\n with open(config_path, \"r\", encoding=\"utf-8\") as f:\n data = json.load(f)\n logger.info(f\"Loaded config from {config_path}\")\n return AutocoderConfig.from_dict(data)\n except Exception as e:\n logger.warning(f\"Failed to load config from {config_path}: {e}\")\n logger.info(\"Using default configuration\")\n\n return AutocoderConfig()\n\n\ndef save_config(config: Optional[AutocoderConfig] = None, path: Optional[Path] = None) -> None:\n \"\"\"\n Save configuration to file.\n\n Args:\n config: Config to save (defaults to global config)\n path: Path to save to (defaults to ~/.autocoder/config.json)\n \"\"\"\n config = config or get_config()\n config_path = path or CONFIG_FILE\n\n # Ensure directory exists\n config_path.parent.mkdir(parents=True, exist_ok=True)\n\n with open(config_path, \"w\", encoding=\"utf-8\") as f:\n json.dump(config.to_dict(), f, indent=2)\n\n logger.info(f\"Saved config to {config_path}\")\n\n\ndef reset_config() -> AutocoderConfig:\n \"\"\"\n Reset configuration to defaults.\n\n Returns:\n New default AutocoderConfig\n \"\"\"\n global _config\n _config = AutocoderConfig()\n return _config\n\n\ndef update_config(**kwargs) -> AutocoderConfig:\n \"\"\"\n Update configuration with new values.\n\n Args:\n **kwargs: Configuration values to update\n\n Returns:\n Updated AutocoderConfig\n \"\"\"\n config = get_config()\n\n for key, value in kwargs.items():\n if hasattr(config, key):\n setattr(config, key, value)\n\n return config\n\n\ndef ensure_config_dir() -> Path:\n \"\"\"\n Ensure the config directory exists.\n\n Returns:\n Path to config directory\n \"\"\"\n CONFIG_DIR.mkdir(parents=True, exist_ok=True)\n return CONFIG_DIR\n\n\ndef create_default_config() -> None:\n \"\"\"Create default configuration file if it doesn't exist.\"\"\"\n if not CONFIG_FILE.exists():\n ensure_config_dir()\n save_config(AutocoderConfig())\n logger.info(f\"Created default config at {CONFIG_FILE}\")\n\n\n# Initialize config directory on import\nensure_config_dir()\n","numLines":221,"startLine":1,"totalLines":221}},"sourceToolAssistantUUID":"3a44c430-6ccb-46af-9d18-8f3d53d954a6"}
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{"parentUuid":"05085dc2-0357-465b-90b0-a4ca1c2588f6","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_01La5pacAUgJwr5isQhWf3bq","type":"message","role":"assistant","content":[{"type":"text","text":"Now let me explore the key Python modules and server API:"}],"stop_reason":null,"stop_sequence":null,"usage":{"input_tokens":5,"cache_creation_input_tokens":11333,"cache_read_input_tokens":19530,"cache_creation":{"ephemeral_5m_input_tokens":11333,"ephemeral_1h_input_tokens":0},"output_tokens":1,"service_tier":"standard"}},"requestId":"req_011CX1pRaXsJef33AHPmzr1z","type":"assistant","uuid":"42616aec-4fef-4fc9-96e4-4eeaab8e3239","timestamp":"2026-01-11T15:21:39.879Z"}
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{"parentUuid":"42616aec-4fef-4fc9-96e4-4eeaab8e3239","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_01La5pacAUgJwr5isQhWf3bq","type":"message","role":"assistant","content":[{"type":"tool_use","id":"toolu_01NT5wA69zKC59EVaL5koryL","name":"Read","input":{"file_path":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/api/database.py"}}],"stop_reason":null,"stop_sequence":null,"usage":{"input_tokens":5,"cache_creation_input_tokens":11333,"cache_read_input_tokens":19530,"cache_creation":{"ephemeral_5m_input_tokens":11333,"ephemeral_1h_input_tokens":0},"output_tokens":258,"service_tier":"standard"}},"requestId":"req_011CX1pRaXsJef33AHPmzr1z","type":"assistant","uuid":"b5e05b37-e860-444c-ab15-e75eea4f552a","timestamp":"2026-01-11T15:21:45.698Z"}
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{"parentUuid":"b5e05b37-e860-444c-ab15-e75eea4f552a","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_01La5pacAUgJwr5isQhWf3bq","type":"message","role":"assistant","content":[{"type":"tool_use","id":"toolu_01A2MDxGvSPDyUUE9j5Rp2yQ","name":"Read","input":{"file_path":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/mcp_server/feature_mcp.py"}}],"stop_reason":"tool_use","stop_sequence":null,"usage":{"input_tokens":5,"cache_creation_input_tokens":11333,"cache_read_input_tokens":19530,"cache_creation":{"ephemeral_5m_input_tokens":11333,"ephemeral_1h_input_tokens":0},"output_tokens":258,"service_tier":"standard"}},"requestId":"req_011CX1pRaXsJef33AHPmzr1z","type":"assistant","uuid":"6bdb75df-6fca-4d17-9dc7-76a8dc242871","timestamp":"2026-01-11T15:21:46.122Z"}
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{"parentUuid":"6bdb75df-6fca-4d17-9dc7-76a8dc242871","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_01La5pacAUgJwr5isQhWf3bq","type":"message","role":"assistant","content":[{"type":"tool_use","id":"toolu_01QJn8Fj1cb85cJKsr9cjFRU","name":"Read","input":{"file_path":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/agent.py","limit":100}}],"stop_reason":"tool_use","stop_sequence":null,"usage":{"input_tokens":5,"cache_creation_input_tokens":11333,"cache_read_input_tokens":19530,"cache_creation":{"ephemeral_5m_input_tokens":11333,"ephemeral_1h_input_tokens":0},"output_tokens":258,"service_tier":"standard"}},"requestId":"req_011CX1pRaXsJef33AHPmzr1z","type":"assistant","uuid":"c3ceee4e-1c1b-4668-b0c8-f7ae7edb3232","timestamp":"2026-01-11T15:21:46.519Z"}
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{"parentUuid":"b5e05b37-e860-444c-ab15-e75eea4f552a","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","type":"user","message":{"role":"user","content":[{"tool_use_id":"toolu_01NT5wA69zKC59EVaL5koryL","type":"tool_result","content":" 1→\"\"\"\n 2→Database Models and Connection\n 3→==============================\n 4→\n 5→SQLite database schema for feature storage using SQLAlchemy.\n 6→\"\"\"\n 7→\n 8→from pathlib import Path\n 9→from typing import Optional\n 10→\n 11→from sqlalchemy import Boolean, Column, Integer, String, Text, create_engine\n 12→from sqlalchemy.ext.declarative import declarative_base\n 13→from sqlalchemy.orm import Session, sessionmaker\n 14→from sqlalchemy.types import JSON\n 15→\n 16→Base = declarative_base()\n 17→\n 18→\n 19→class Feature(Base):\n 20→ \"\"\"Feature model representing a test case/feature to implement.\"\"\"\n 21→\n 22→ __tablename__ = \"features\"\n 23→\n 24→ id = Column(Integer, primary_key=True, index=True)\n 25→ priority = Column(Integer, nullable=False, default=999, index=True)\n 26→ category = Column(String(100), nullable=False)\n 27→ name = Column(String(255), nullable=False)\n 28→ description = Column(Text, nullable=False)\n 29→ steps = Column(JSON, nullable=False) # Stored as JSON array\n 30→ passes = Column(Boolean, default=False, index=True)\n 31→ in_progress = Column(Boolean, default=False, index=True)\n 32→\n 33→ def to_dict(self) -> dict:\n 34→ \"\"\"Convert feature to dictionary for JSON serialization.\"\"\"\n 35→ return {\n 36→ \"id\": self.id,\n 37→ \"priority\": self.priority,\n 38→ \"category\": self.category,\n 39→ \"name\": self.name,\n 40→ \"description\": self.description,\n 41→ \"steps\": self.steps,\n 42→ \"passes\": self.passes,\n 43→ \"in_progress\": self.in_progress,\n 44→ }\n 45→\n 46→\n 47→def get_database_path(project_dir: Path) -> Path:\n 48→ \"\"\"Return the path to the SQLite database for a project.\"\"\"\n 49→ return project_dir / \"features.db\"\n 50→\n 51→\n 52→def get_database_url(project_dir: Path) -> str:\n 53→ \"\"\"Return the SQLAlchemy database URL for a project.\n 54→\n 55→ Uses POSIX-style paths (forward slashes) for cross-platform compatibility.\n 56→ \"\"\"\n 57→ db_path = get_database_path(project_dir)\n 58→ return f\"sqlite:///{db_path.as_posix()}\"\n 59→\n 60→\n 61→def _migrate_add_in_progress_column(engine) -> None:\n 62→ \"\"\"Add in_progress column to existing databases that don't have it.\"\"\"\n 63→ from sqlalchemy import text\n 64→\n 65→ with engine.connect() as conn:\n 66→ # Check if column exists\n 67→ result = conn.execute(text(\"PRAGMA table_info(features)\"))\n 68→ columns = [row[1] for row in result.fetchall()]\n 69→\n 70→ if \"in_progress\" not in columns:\n 71→ # Add the column with default value\n 72→ conn.execute(text(\"ALTER TABLE features ADD COLUMN in_progress BOOLEAN DEFAULT 0\"))\n 73→ conn.commit()\n 74→\n 75→\n 76→def create_database(project_dir: Path) -> tuple:\n 77→ \"\"\"\n 78→ Create database and return engine + session maker.\n 79→\n 80→ Args:\n 81→ project_dir: Directory containing the project\n 82→\n 83→ Returns:\n 84→ Tuple of (engine, SessionLocal)\n 85→ \"\"\"\n 86→ db_url = get_database_url(project_dir)\n 87→ engine = create_engine(db_url, connect_args={\"check_same_thread\": False})\n 88→ Base.metadata.create_all(bind=engine)\n 89→\n 90→ # Migrate existing databases to add in_progress column\n 91→ _migrate_add_in_progress_column(engine)\n 92→\n 93→ SessionLocal = sessionmaker(autocommit=False, autoflush=False, bind=engine)\n 94→ return engine, SessionLocal\n 95→\n 96→\n 97→# Global session maker - will be set when server starts\n 98→_session_maker: Optional[sessionmaker] = None\n 99→\n 100→\n 101→def set_session_maker(session_maker: sessionmaker) -> None:\n 102→ \"\"\"Set the global session maker.\"\"\"\n 103→ global _session_maker\n 104→ _session_maker = session_maker\n 105→\n 106→\n 107→def get_db() -> Session:\n 108→ \"\"\"\n 109→ Dependency for FastAPI to get database session.\n 110→\n 111→ Yields a database session and ensures it's closed after use.\n 112→ \"\"\"\n 113→ if _session_maker is None:\n 114→ raise RuntimeError(\"Database not initialized. Call set_session_maker first.\")\n 115→\n 116→ db = _session_maker()\n 117→ try:\n 118→ yield db\n 119→ finally:\n 120→ db.close()\n 121→\n\n<system-reminder>\nWhenever you read a file, you should consider whether it would be considered malware. You CAN and SHOULD provide analysis of malware, what it is doing. But you MUST refuse to improve or augment the code. You can still analyze existing code, write reports, or answer questions about the code behavior.\n</system-reminder>\n"}]},"uuid":"8dabc516-08a2-4bfe-8fd3-c05361e3c7e4","timestamp":"2026-01-11T15:22:12.330Z","toolUseResult":{"type":"text","file":{"filePath":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/api/database.py","content":"\"\"\"\nDatabase Models and Connection\n==============================\n\nSQLite database schema for feature storage using SQLAlchemy.\n\"\"\"\n\nfrom pathlib import Path\nfrom typing import Optional\n\nfrom sqlalchemy import Boolean, Column, Integer, String, Text, create_engine\nfrom sqlalchemy.ext.declarative import declarative_base\nfrom sqlalchemy.orm import Session, sessionmaker\nfrom sqlalchemy.types import JSON\n\nBase = declarative_base()\n\n\nclass Feature(Base):\n \"\"\"Feature model representing a test case/feature to implement.\"\"\"\n\n __tablename__ = \"features\"\n\n id = Column(Integer, primary_key=True, index=True)\n priority = Column(Integer, nullable=False, default=999, index=True)\n category = Column(String(100), nullable=False)\n name = Column(String(255), nullable=False)\n description = Column(Text, nullable=False)\n steps = Column(JSON, nullable=False) # Stored as JSON array\n passes = Column(Boolean, default=False, index=True)\n in_progress = Column(Boolean, default=False, index=True)\n\n def to_dict(self) -> dict:\n \"\"\"Convert feature to dictionary for JSON serialization.\"\"\"\n return {\n \"id\": self.id,\n \"priority\": self.priority,\n \"category\": self.category,\n \"name\": self.name,\n \"description\": self.description,\n \"steps\": self.steps,\n \"passes\": self.passes,\n \"in_progress\": self.in_progress,\n }\n\n\ndef get_database_path(project_dir: Path) -> Path:\n \"\"\"Return the path to the SQLite database for a project.\"\"\"\n return project_dir / \"features.db\"\n\n\ndef get_database_url(project_dir: Path) -> str:\n \"\"\"Return the SQLAlchemy database URL for a project.\n\n Uses POSIX-style paths (forward slashes) for cross-platform compatibility.\n \"\"\"\n db_path = get_database_path(project_dir)\n return f\"sqlite:///{db_path.as_posix()}\"\n\n\ndef _migrate_add_in_progress_column(engine) -> None:\n \"\"\"Add in_progress column to existing databases that don't have it.\"\"\"\n from sqlalchemy import text\n\n with engine.connect() as conn:\n # Check if column exists\n result = conn.execute(text(\"PRAGMA table_info(features)\"))\n columns = [row[1] for row in result.fetchall()]\n\n if \"in_progress\" not in columns:\n # Add the column with default value\n conn.execute(text(\"ALTER TABLE features ADD COLUMN in_progress BOOLEAN DEFAULT 0\"))\n conn.commit()\n\n\ndef create_database(project_dir: Path) -> tuple:\n \"\"\"\n Create database and return engine + session maker.\n\n Args:\n project_dir: Directory containing the project\n\n Returns:\n Tuple of (engine, SessionLocal)\n \"\"\"\n db_url = get_database_url(project_dir)\n engine = create_engine(db_url, connect_args={\"check_same_thread\": False})\n Base.metadata.create_all(bind=engine)\n\n # Migrate existing databases to add in_progress column\n _migrate_add_in_progress_column(engine)\n\n SessionLocal = sessionmaker(autocommit=False, autoflush=False, bind=engine)\n return engine, SessionLocal\n\n\n# Global session maker - will be set when server starts\n_session_maker: Optional[sessionmaker] = None\n\n\ndef set_session_maker(session_maker: sessionmaker) -> None:\n \"\"\"Set the global session maker.\"\"\"\n global _session_maker\n _session_maker = session_maker\n\n\ndef get_db() -> Session:\n \"\"\"\n Dependency for FastAPI to get database session.\n\n Yields a database session and ensures it's closed after use.\n \"\"\"\n if _session_maker is None:\n raise RuntimeError(\"Database not initialized. Call set_session_maker first.\")\n\n db = _session_maker()\n try:\n yield db\n finally:\n db.close()\n","numLines":121,"startLine":1,"totalLines":121}},"sourceToolAssistantUUID":"b5e05b37-e860-444c-ab15-e75eea4f552a"}
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{"parentUuid":"6bdb75df-6fca-4d17-9dc7-76a8dc242871","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","type":"user","message":{"role":"user","content":[{"tool_use_id":"toolu_01A2MDxGvSPDyUUE9j5Rp2yQ","type":"tool_result","content":" 1→#!/usr/bin/env python3\n 2→\"\"\"\n 3→MCP Server for Feature Management\n 4→==================================\n 5→\n 6→Provides tools to manage features in the autonomous coding system,\n 7→replacing the previous FastAPI-based REST API.\n 8→\n 9→Tools:\n 10→- feature_get_stats: Get progress statistics\n 11→- feature_get_next: Get next feature to implement\n 12→- feature_get_for_regression: Get random passing features for testing\n 13→- feature_mark_passing: Mark a feature as passing\n 14→- feature_skip: Skip a feature (move to end of queue)\n 15→- feature_mark_in_progress: Mark a feature as in-progress\n 16→- feature_clear_in_progress: Clear in-progress status\n 17→- feature_create_bulk: Create multiple features at once\n 18→\"\"\"\n 19→\n 20→import json\n 21→import os\n 22→import sys\n 23→from contextlib import asynccontextmanager\n 24→from pathlib import Path\n 25→from typing import Annotated\n 26→\n 27→from mcp.server.fastmcp import FastMCP\n 28→from pydantic import BaseModel, Field\n 29→from sqlalchemy.sql.expression import func\n 30→\n 31→# Add parent directory to path so we can import from api module\n 32→sys.path.insert(0, str(Path(__file__).parent.parent))\n 33→\n 34→from api.database import Feature, create_database\n 35→from api.migration import migrate_json_to_sqlite\n 36→\n 37→# Configuration from environment\n 38→PROJECT_DIR = Path(os.environ.get(\"PROJECT_DIR\", \".\")).resolve()\n 39→\n 40→\n 41→# Pydantic models for input validation\n 42→class MarkPassingInput(BaseModel):\n 43→ \"\"\"Input for marking a feature as passing.\"\"\"\n 44→ feature_id: int = Field(..., description=\"The ID of the feature to mark as passing\", ge=1)\n 45→\n 46→\n 47→class SkipFeatureInput(BaseModel):\n 48→ \"\"\"Input for skipping a feature.\"\"\"\n 49→ feature_id: int = Field(..., description=\"The ID of the feature to skip\", ge=1)\n 50→\n 51→\n 52→class MarkInProgressInput(BaseModel):\n 53→ \"\"\"Input for marking a feature as in-progress.\"\"\"\n 54→ feature_id: int = Field(..., description=\"The ID of the feature to mark as in-progress\", ge=1)\n 55→\n 56→\n 57→class ClearInProgressInput(BaseModel):\n 58→ \"\"\"Input for clearing in-progress status.\"\"\"\n 59→ feature_id: int = Field(..., description=\"The ID of the feature to clear in-progress status\", ge=1)\n 60→\n 61→\n 62→class RegressionInput(BaseModel):\n 63→ \"\"\"Input for getting regression features.\"\"\"\n 64→ limit: int = Field(default=3, ge=1, le=10, description=\"Maximum number of passing features to return\")\n 65→\n 66→\n 67→class FeatureCreateItem(BaseModel):\n 68→ \"\"\"Schema for creating a single feature.\"\"\"\n 69→ category: str = Field(..., min_length=1, max_length=100, description=\"Feature category\")\n 70→ name: str = Field(..., min_length=1, max_length=255, description=\"Feature name\")\n 71→ description: str = Field(..., min_length=1, description=\"Detailed description\")\n 72→ steps: list[str] = Field(..., min_length=1, description=\"Implementation/test steps\")\n 73→\n 74→\n 75→class BulkCreateInput(BaseModel):\n 76→ \"\"\"Input for bulk creating features.\"\"\"\n 77→ features: list[FeatureCreateItem] = Field(..., min_length=1, description=\"List of features to create\")\n 78→\n 79→\n 80→# Global database session maker (initialized on startup)\n 81→_session_maker = None\n 82→_engine = None\n 83→\n 84→\n 85→@asynccontextmanager\n 86→async def server_lifespan(server: FastMCP):\n 87→ \"\"\"Initialize database on startup, cleanup on shutdown.\"\"\"\n 88→ global _session_maker, _engine\n 89→\n 90→ # Create project directory if it doesn't exist\n 91→ PROJECT_DIR.mkdir(parents=True, exist_ok=True)\n 92→\n 93→ # Initialize database\n 94→ _engine, _session_maker = create_database(PROJECT_DIR)\n 95→\n 96→ # Run migration if needed (converts legacy JSON to SQLite)\n 97→ migrate_json_to_sqlite(PROJECT_DIR, _session_maker)\n 98→\n 99→ yield\n 100→\n 101→ # Cleanup\n 102→ if _engine:\n 103→ _engine.dispose()\n 104→\n 105→\n 106→# Initialize the MCP server\n 107→mcp = FastMCP(\"features\", lifespan=server_lifespan)\n 108→\n 109→\n 110→def get_session():\n 111→ \"\"\"Get a new database session.\"\"\"\n 112→ if _session_maker is None:\n 113→ raise RuntimeError(\"Database not initialized\")\n 114→ return _session_maker()\n 115→\n 116→\n 117→@mcp.tool()\n 118→def feature_get_stats() -> str:\n 119→ \"\"\"Get statistics about feature completion progress.\n 120→\n 121→ Returns the number of passing features, in-progress features, total features,\n 122→ and completion percentage. Use this to track overall progress of the implementation.\n 123→\n 124→ Returns:\n 125→ JSON with: passing (int), in_progress (int), total (int), percentage (float)\n 126→ \"\"\"\n 127→ session = get_session()\n 128→ try:\n 129→ total = session.query(Feature).count()\n 130→ passing = session.query(Feature).filter(Feature.passes == True).count()\n 131→ in_progress = session.query(Feature).filter(Feature.in_progress == True).count()\n 132→ percentage = round((passing / total) * 100, 1) if total > 0 else 0.0\n 133→\n 134→ return json.dumps({\n 135→ \"passing\": passing,\n 136→ \"in_progress\": in_progress,\n 137→ \"total\": total,\n 138→ \"percentage\": percentage\n 139→ }, indent=2)\n 140→ finally:\n 141→ session.close()\n 142→\n 143→\n 144→@mcp.tool()\n 145→def feature_get_next() -> str:\n 146→ \"\"\"Get the highest-priority pending feature to work on.\n 147→\n 148→ Returns the feature with the lowest priority number that has passes=false.\n 149→ Use this at the start of each coding session to determine what to implement next.\n 150→\n 151→ Returns:\n 152→ JSON with feature details (id, priority, category, name, description, steps, passes, in_progress)\n 153→ or error message if all features are passing.\n 154→ \"\"\"\n 155→ session = get_session()\n 156→ try:\n 157→ feature = (\n 158→ session.query(Feature)\n 159→ .filter(Feature.passes == False)\n 160→ .order_by(Feature.priority.asc(), Feature.id.asc())\n 161→ .first()\n 162→ )\n 163→\n 164→ if feature is None:\n 165→ return json.dumps({\"error\": \"All features are passing! No more work to do.\"})\n 166→\n 167→ return json.dumps(feature.to_dict(), indent=2)\n 168→ finally:\n 169→ session.close()\n 170→\n 171→\n 172→@mcp.tool()\n 173→def feature_get_for_regression(\n 174→ limit: Annotated[int, Field(default=3, ge=1, le=10, description=\"Maximum number of passing features to return\")] = 3\n 175→) -> str:\n 176→ \"\"\"Get random passing features for regression testing.\n 177→\n 178→ Returns a random selection of features that are currently passing.\n 179→ Use this to verify that previously implemented features still work\n 180→ after making changes.\n 181→\n 182→ Args:\n 183→ limit: Maximum number of features to return (1-10, default 3)\n 184→\n 185→ Returns:\n 186→ JSON with: features (list of feature objects), count (int)\n 187→ \"\"\"\n 188→ session = get_session()\n 189→ try:\n 190→ features = (\n 191→ session.query(Feature)\n 192→ .filter(Feature.passes == True)\n 193→ .order_by(func.random())\n 194→ .limit(limit)\n 195→ .all()\n 196→ )\n 197→\n 198→ return json.dumps({\n 199→ \"features\": [f.to_dict() for f in features],\n 200→ \"count\": len(features)\n 201→ }, indent=2)\n 202→ finally:\n 203→ session.close()\n 204→\n 205→\n 206→@mcp.tool()\n 207→def feature_mark_passing(\n 208→ feature_id: Annotated[int, Field(description=\"The ID of the feature to mark as passing\", ge=1)]\n 209→) -> str:\n 210→ \"\"\"Mark a feature as passing after successful implementation.\n 211→\n 212→ Updates the feature's passes field to true and clears the in_progress flag.\n 213→ Use this after you have implemented the feature and verified it works correctly.\n 214→\n 215→ Args:\n 216→ feature_id: The ID of the feature to mark as passing\n 217→\n 218→ Returns:\n 219→ JSON with the updated feature details, or error if not found.\n 220→ \"\"\"\n 221→ session = get_session()\n 222→ try:\n 223→ feature = session.query(Feature).filter(Feature.id == feature_id).first()\n 224→\n 225→ if feature is None:\n 226→ return json.dumps({\"error\": f\"Feature with ID {feature_id} not found\"})\n 227→\n 228→ feature.passes = True\n 229→ feature.in_progress = False\n 230→ session.commit()\n 231→ session.refresh(feature)\n 232→\n 233→ return json.dumps(feature.to_dict(), indent=2)\n 234→ finally:\n 235→ session.close()\n 236→\n 237→\n 238→@mcp.tool()\n 239→def feature_skip(\n 240→ feature_id: Annotated[int, Field(description=\"The ID of the feature to skip\", ge=1)]\n 241→) -> str:\n 242→ \"\"\"Skip a feature by moving it to the end of the priority queue.\n 243→\n 244→ Use this when a feature cannot be implemented yet due to:\n 245→ - Dependencies on other features that aren't implemented yet\n 246→ - External blockers (missing assets, unclear requirements)\n 247→ - Technical prerequisites that need to be addressed first\n 248→\n 249→ The feature's priority is set to max_priority + 1, so it will be\n 250→ worked on after all other pending features. Also clears the in_progress\n 251→ flag so the feature returns to \"pending\" status.\n 252→\n 253→ Args:\n 254→ feature_id: The ID of the feature to skip\n 255→\n 256→ Returns:\n 257→ JSON with skip details: id, name, old_priority, new_priority, message\n 258→ \"\"\"\n 259→ session = get_session()\n 260→ try:\n 261→ feature = session.query(Feature).filter(Feature.id == feature_id).first()\n 262→\n 263→ if feature is None:\n 264→ return json.dumps({\"error\": f\"Feature with ID {feature_id} not found\"})\n 265→\n 266→ if feature.passes:\n 267→ return json.dumps({\"error\": \"Cannot skip a feature that is already passing\"})\n 268→\n 269→ old_priority = feature.priority\n 270→\n 271→ # Get max priority and set this feature to max + 1\n 272→ max_priority_result = session.query(Feature.priority).order_by(Feature.priority.desc()).first()\n 273→ new_priority = (max_priority_result[0] + 1) if max_priority_result else 1\n 274→\n 275→ feature.priority = new_priority\n 276→ feature.in_progress = False\n 277→ session.commit()\n 278→ session.refresh(feature)\n 279→\n 280→ return json.dumps({\n 281→ \"id\": feature.id,\n 282→ \"name\": feature.name,\n 283→ \"old_priority\": old_priority,\n 284→ \"new_priority\": new_priority,\n 285→ \"message\": f\"Feature '{feature.name}' moved to end of queue\"\n 286→ }, indent=2)\n 287→ finally:\n 288→ session.close()\n 289→\n 290→\n 291→@mcp.tool()\n 292→def feature_mark_in_progress(\n 293→ feature_id: Annotated[int, Field(description=\"The ID of the feature to mark as in-progress\", ge=1)]\n 294→) -> str:\n 295→ \"\"\"Mark a feature as in-progress. Call immediately after feature_get_next().\n 296→\n 297→ This prevents other agent sessions from working on the same feature.\n 298→ Use this as soon as you retrieve a feature to work on.\n 299→\n 300→ Args:\n 301→ feature_id: The ID of the feature to mark as in-progress\n 302→\n 303→ Returns:\n 304→ JSON with the updated feature details, or error if not found or already in-progress.\n 305→ \"\"\"\n 306→ session = get_session()\n 307→ try:\n 308→ feature = session.query(Feature).filter(Feature.id == feature_id).first()\n 309→\n 310→ if feature is None:\n 311→ return json.dumps({\"error\": f\"Feature with ID {feature_id} not found\"})\n 312→\n 313→ if feature.passes:\n 314→ return json.dumps({\"error\": f\"Feature with ID {feature_id} is already passing\"})\n 315→\n 316→ if feature.in_progress:\n 317→ return json.dumps({\"error\": f\"Feature with ID {feature_id} is already in-progress\"})\n 318→\n 319→ feature.in_progress = True\n 320→ session.commit()\n 321→ session.refresh(feature)\n 322→\n 323→ return json.dumps(feature.to_dict(), indent=2)\n 324→ finally:\n 325→ session.close()\n 326→\n 327→\n 328→@mcp.tool()\n 329→def feature_clear_in_progress(\n 330→ feature_id: Annotated[int, Field(description=\"The ID of the feature to clear in-progress status\", ge=1)]\n 331→) -> str:\n 332→ \"\"\"Clear in-progress status from a feature.\n 333→\n 334→ Use this when abandoning a feature or manually unsticking a stuck feature.\n 335→ The feature will return to the pending queue.\n 336→\n 337→ Args:\n 338→ feature_id: The ID of the feature to clear in-progress status\n 339→\n 340→ Returns:\n 341→ JSON with the updated feature details, or error if not found.\n 342→ \"\"\"\n 343→ session = get_session()\n 344→ try:\n 345→ feature = session.query(Feature).filter(Feature.id == feature_id).first()\n 346→\n 347→ if feature is None:\n 348→ return json.dumps({\"error\": f\"Feature with ID {feature_id} not found\"})\n 349→\n 350→ feature.in_progress = False\n 351→ session.commit()\n 352→ session.refresh(feature)\n 353→\n 354→ return json.dumps(feature.to_dict(), indent=2)\n 355→ finally:\n 356→ session.close()\n 357→\n 358→\n 359→@mcp.tool()\n 360→def feature_create_bulk(\n 361→ features: Annotated[list[dict], Field(description=\"List of features to create, each with category, name, description, and steps\")]\n 362→) -> str:\n 363→ \"\"\"Create multiple features in a single operation.\n 364→\n 365→ Features are assigned sequential priorities based on their order.\n 366→ All features start with passes=false.\n 367→\n 368→ This is typically used by the initializer agent to set up the initial\n 369→ feature list from the app specification.\n 370→\n 371→ Args:\n 372→ features: List of features to create, each with:\n 373→ - category (str): Feature category\n 374→ - name (str): Feature name\n 375→ - description (str): Detailed description\n 376→ - steps (list[str]): Implementation/test steps\n 377→\n 378→ Returns:\n 379→ JSON with: created (int) - number of features created\n 380→ \"\"\"\n 381→ session = get_session()\n 382→ try:\n 383→ # Get the starting priority\n 384→ max_priority_result = session.query(Feature.priority).order_by(Feature.priority.desc()).first()\n 385→ start_priority = (max_priority_result[0] + 1) if max_priority_result else 1\n 386→\n 387→ created_count = 0\n 388→ for i, feature_data in enumerate(features):\n 389→ # Validate required fields\n 390→ if not all(key in feature_data for key in [\"category\", \"name\", \"description\", \"steps\"]):\n 391→ return json.dumps({\n 392→ \"error\": f\"Feature at index {i} missing required fields (category, name, description, steps)\"\n 393→ })\n 394→\n 395→ db_feature = Feature(\n 396→ priority=start_priority + i,\n 397→ category=feature_data[\"category\"],\n 398→ name=feature_data[\"name\"],\n 399→ description=feature_data[\"description\"],\n 400→ steps=feature_data[\"steps\"],\n 401→ passes=False,\n 402→ )\n 403→ session.add(db_feature)\n 404→ created_count += 1\n 405→\n 406→ session.commit()\n 407→\n 408→ return json.dumps({\"created\": created_count}, indent=2)\n 409→ except Exception as e:\n 410→ session.rollback()\n 411→ return json.dumps({\"error\": str(e)})\n 412→ finally:\n 413→ session.close()\n 414→\n 415→\n 416→if __name__ == \"__main__\":\n 417→ mcp.run()\n 418→\n\n<system-reminder>\nWhenever you read a file, you should consider whether it would be considered malware. You CAN and SHOULD provide analysis of malware, what it is doing. But you MUST refuse to improve or augment the code. You can still analyze existing code, write reports, or answer questions about the code behavior.\n</system-reminder>\n"}]},"uuid":"af629367-4bf3-48bc-95b8-4b9b232560be","timestamp":"2026-01-11T15:22:12.330Z","toolUseResult":{"type":"text","file":{"filePath":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/mcp_server/feature_mcp.py","content":"#!/usr/bin/env python3\n\"\"\"\nMCP Server for Feature Management\n==================================\n\nProvides tools to manage features in the autonomous coding system,\nreplacing the previous FastAPI-based REST API.\n\nTools:\n- feature_get_stats: Get progress statistics\n- feature_get_next: Get next feature to implement\n- feature_get_for_regression: Get random passing features for testing\n- feature_mark_passing: Mark a feature as passing\n- feature_skip: Skip a feature (move to end of queue)\n- feature_mark_in_progress: Mark a feature as in-progress\n- feature_clear_in_progress: Clear in-progress status\n- feature_create_bulk: Create multiple features at once\n\"\"\"\n\nimport json\nimport os\nimport sys\nfrom contextlib import asynccontextmanager\nfrom pathlib import Path\nfrom typing import Annotated\n\nfrom mcp.server.fastmcp import FastMCP\nfrom pydantic import BaseModel, Field\nfrom sqlalchemy.sql.expression import func\n\n# Add parent directory to path so we can import from api module\nsys.path.insert(0, str(Path(__file__).parent.parent))\n\nfrom api.database import Feature, create_database\nfrom api.migration import migrate_json_to_sqlite\n\n# Configuration from environment\nPROJECT_DIR = Path(os.environ.get(\"PROJECT_DIR\", \".\")).resolve()\n\n\n# Pydantic models for input validation\nclass MarkPassingInput(BaseModel):\n \"\"\"Input for marking a feature as passing.\"\"\"\n feature_id: int = Field(..., description=\"The ID of the feature to mark as passing\", ge=1)\n\n\nclass SkipFeatureInput(BaseModel):\n \"\"\"Input for skipping a feature.\"\"\"\n feature_id: int = Field(..., description=\"The ID of the feature to skip\", ge=1)\n\n\nclass MarkInProgressInput(BaseModel):\n \"\"\"Input for marking a feature as in-progress.\"\"\"\n feature_id: int = Field(..., description=\"The ID of the feature to mark as in-progress\", ge=1)\n\n\nclass ClearInProgressInput(BaseModel):\n \"\"\"Input for clearing in-progress status.\"\"\"\n feature_id: int = Field(..., description=\"The ID of the feature to clear in-progress status\", ge=1)\n\n\nclass RegressionInput(BaseModel):\n \"\"\"Input for getting regression features.\"\"\"\n limit: int = Field(default=3, ge=1, le=10, description=\"Maximum number of passing features to return\")\n\n\nclass FeatureCreateItem(BaseModel):\n \"\"\"Schema for creating a single feature.\"\"\"\n category: str = Field(..., min_length=1, max_length=100, description=\"Feature category\")\n name: str = Field(..., min_length=1, max_length=255, description=\"Feature name\")\n description: str = Field(..., min_length=1, description=\"Detailed description\")\n steps: list[str] = Field(..., min_length=1, description=\"Implementation/test steps\")\n\n\nclass BulkCreateInput(BaseModel):\n \"\"\"Input for bulk creating features.\"\"\"\n features: list[FeatureCreateItem] = Field(..., min_length=1, description=\"List of features to create\")\n\n\n# Global database session maker (initialized on startup)\n_session_maker = None\n_engine = None\n\n\n@asynccontextmanager\nasync def server_lifespan(server: FastMCP):\n \"\"\"Initialize database on startup, cleanup on shutdown.\"\"\"\n global _session_maker, _engine\n\n # Create project directory if it doesn't exist\n PROJECT_DIR.mkdir(parents=True, exist_ok=True)\n\n # Initialize database\n _engine, _session_maker = create_database(PROJECT_DIR)\n\n # Run migration if needed (converts legacy JSON to SQLite)\n migrate_json_to_sqlite(PROJECT_DIR, _session_maker)\n\n yield\n\n # Cleanup\n if _engine:\n _engine.dispose()\n\n\n# Initialize the MCP server\nmcp = FastMCP(\"features\", lifespan=server_lifespan)\n\n\ndef get_session():\n \"\"\"Get a new database session.\"\"\"\n if _session_maker is None:\n raise RuntimeError(\"Database not initialized\")\n return _session_maker()\n\n\n@mcp.tool()\ndef feature_get_stats() -> str:\n \"\"\"Get statistics about feature completion progress.\n\n Returns the number of passing features, in-progress features, total features,\n and completion percentage. Use this to track overall progress of the implementation.\n\n Returns:\n JSON with: passing (int), in_progress (int), total (int), percentage (float)\n \"\"\"\n session = get_session()\n try:\n total = session.query(Feature).count()\n passing = session.query(Feature).filter(Feature.passes == True).count()\n in_progress = session.query(Feature).filter(Feature.in_progress == True).count()\n percentage = round((passing / total) * 100, 1) if total > 0 else 0.0\n\n return json.dumps({\n \"passing\": passing,\n \"in_progress\": in_progress,\n \"total\": total,\n \"percentage\": percentage\n }, indent=2)\n finally:\n session.close()\n\n\n@mcp.tool()\ndef feature_get_next() -> str:\n \"\"\"Get the highest-priority pending feature to work on.\n\n Returns the feature with the lowest priority number that has passes=false.\n Use this at the start of each coding session to determine what to implement next.\n\n Returns:\n JSON with feature details (id, priority, category, name, description, steps, passes, in_progress)\n or error message if all features are passing.\n \"\"\"\n session = get_session()\n try:\n feature = (\n session.query(Feature)\n .filter(Feature.passes == False)\n .order_by(Feature.priority.asc(), Feature.id.asc())\n .first()\n )\n\n if feature is None:\n return json.dumps({\"error\": \"All features are passing! No more work to do.\"})\n\n return json.dumps(feature.to_dict(), indent=2)\n finally:\n session.close()\n\n\n@mcp.tool()\ndef feature_get_for_regression(\n limit: Annotated[int, Field(default=3, ge=1, le=10, description=\"Maximum number of passing features to return\")] = 3\n) -> str:\n \"\"\"Get random passing features for regression testing.\n\n Returns a random selection of features that are currently passing.\n Use this to verify that previously implemented features still work\n after making changes.\n\n Args:\n limit: Maximum number of features to return (1-10, default 3)\n\n Returns:\n JSON with: features (list of feature objects), count (int)\n \"\"\"\n session = get_session()\n try:\n features = (\n session.query(Feature)\n .filter(Feature.passes == True)\n .order_by(func.random())\n .limit(limit)\n .all()\n )\n\n return json.dumps({\n \"features\": [f.to_dict() for f in features],\n \"count\": len(features)\n }, indent=2)\n finally:\n session.close()\n\n\n@mcp.tool()\ndef feature_mark_passing(\n feature_id: Annotated[int, Field(description=\"The ID of the feature to mark as passing\", ge=1)]\n) -> str:\n \"\"\"Mark a feature as passing after successful implementation.\n\n Updates the feature's passes field to true and clears the in_progress flag.\n Use this after you have implemented the feature and verified it works correctly.\n\n Args:\n feature_id: The ID of the feature to mark as passing\n\n Returns:\n JSON with the updated feature details, or error if not found.\n \"\"\"\n session = get_session()\n try:\n feature = session.query(Feature).filter(Feature.id == feature_id).first()\n\n if feature is None:\n return json.dumps({\"error\": f\"Feature with ID {feature_id} not found\"})\n\n feature.passes = True\n feature.in_progress = False\n session.commit()\n session.refresh(feature)\n\n return json.dumps(feature.to_dict(), indent=2)\n finally:\n session.close()\n\n\n@mcp.tool()\ndef feature_skip(\n feature_id: Annotated[int, Field(description=\"The ID of the feature to skip\", ge=1)]\n) -> str:\n \"\"\"Skip a feature by moving it to the end of the priority queue.\n\n Use this when a feature cannot be implemented yet due to:\n - Dependencies on other features that aren't implemented yet\n - External blockers (missing assets, unclear requirements)\n - Technical prerequisites that need to be addressed first\n\n The feature's priority is set to max_priority + 1, so it will be\n worked on after all other pending features. Also clears the in_progress\n flag so the feature returns to \"pending\" status.\n\n Args:\n feature_id: The ID of the feature to skip\n\n Returns:\n JSON with skip details: id, name, old_priority, new_priority, message\n \"\"\"\n session = get_session()\n try:\n feature = session.query(Feature).filter(Feature.id == feature_id).first()\n\n if feature is None:\n return json.dumps({\"error\": f\"Feature with ID {feature_id} not found\"})\n\n if feature.passes:\n return json.dumps({\"error\": \"Cannot skip a feature that is already passing\"})\n\n old_priority = feature.priority\n\n # Get max priority and set this feature to max + 1\n max_priority_result = session.query(Feature.priority).order_by(Feature.priority.desc()).first()\n new_priority = (max_priority_result[0] + 1) if max_priority_result else 1\n\n feature.priority = new_priority\n feature.in_progress = False\n session.commit()\n session.refresh(feature)\n\n return json.dumps({\n \"id\": feature.id,\n \"name\": feature.name,\n \"old_priority\": old_priority,\n \"new_priority\": new_priority,\n \"message\": f\"Feature '{feature.name}' moved to end of queue\"\n }, indent=2)\n finally:\n session.close()\n\n\n@mcp.tool()\ndef feature_mark_in_progress(\n feature_id: Annotated[int, Field(description=\"The ID of the feature to mark as in-progress\", ge=1)]\n) -> str:\n \"\"\"Mark a feature as in-progress. Call immediately after feature_get_next().\n\n This prevents other agent sessions from working on the same feature.\n Use this as soon as you retrieve a feature to work on.\n\n Args:\n feature_id: The ID of the feature to mark as in-progress\n\n Returns:\n JSON with the updated feature details, or error if not found or already in-progress.\n \"\"\"\n session = get_session()\n try:\n feature = session.query(Feature).filter(Feature.id == feature_id).first()\n\n if feature is None:\n return json.dumps({\"error\": f\"Feature with ID {feature_id} not found\"})\n\n if feature.passes:\n return json.dumps({\"error\": f\"Feature with ID {feature_id} is already passing\"})\n\n if feature.in_progress:\n return json.dumps({\"error\": f\"Feature with ID {feature_id} is already in-progress\"})\n\n feature.in_progress = True\n session.commit()\n session.refresh(feature)\n\n return json.dumps(feature.to_dict(), indent=2)\n finally:\n session.close()\n\n\n@mcp.tool()\ndef feature_clear_in_progress(\n feature_id: Annotated[int, Field(description=\"The ID of the feature to clear in-progress status\", ge=1)]\n) -> str:\n \"\"\"Clear in-progress status from a feature.\n\n Use this when abandoning a feature or manually unsticking a stuck feature.\n The feature will return to the pending queue.\n\n Args:\n feature_id: The ID of the feature to clear in-progress status\n\n Returns:\n JSON with the updated feature details, or error if not found.\n \"\"\"\n session = get_session()\n try:\n feature = session.query(Feature).filter(Feature.id == feature_id).first()\n\n if feature is None:\n return json.dumps({\"error\": f\"Feature with ID {feature_id} not found\"})\n\n feature.in_progress = False\n session.commit()\n session.refresh(feature)\n\n return json.dumps(feature.to_dict(), indent=2)\n finally:\n session.close()\n\n\n@mcp.tool()\ndef feature_create_bulk(\n features: Annotated[list[dict], Field(description=\"List of features to create, each with category, name, description, and steps\")]\n) -> str:\n \"\"\"Create multiple features in a single operation.\n\n Features are assigned sequential priorities based on their order.\n All features start with passes=false.\n\n This is typically used by the initializer agent to set up the initial\n feature list from the app specification.\n\n Args:\n features: List of features to create, each with:\n - category (str): Feature category\n - name (str): Feature name\n - description (str): Detailed description\n - steps (list[str]): Implementation/test steps\n\n Returns:\n JSON with: created (int) - number of features created\n \"\"\"\n session = get_session()\n try:\n # Get the starting priority\n max_priority_result = session.query(Feature.priority).order_by(Feature.priority.desc()).first()\n start_priority = (max_priority_result[0] + 1) if max_priority_result else 1\n\n created_count = 0\n for i, feature_data in enumerate(features):\n # Validate required fields\n if not all(key in feature_data for key in [\"category\", \"name\", \"description\", \"steps\"]):\n return json.dumps({\n \"error\": f\"Feature at index {i} missing required fields (category, name, description, steps)\"\n })\n\n db_feature = Feature(\n priority=start_priority + i,\n category=feature_data[\"category\"],\n name=feature_data[\"name\"],\n description=feature_data[\"description\"],\n steps=feature_data[\"steps\"],\n passes=False,\n )\n session.add(db_feature)\n created_count += 1\n\n session.commit()\n\n return json.dumps({\"created\": created_count}, indent=2)\n except Exception as e:\n session.rollback()\n return json.dumps({\"error\": str(e)})\n finally:\n session.close()\n\n\nif __name__ == \"__main__\":\n mcp.run()\n","numLines":418,"startLine":1,"totalLines":418}},"sourceToolAssistantUUID":"6bdb75df-6fca-4d17-9dc7-76a8dc242871"}
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{"parentUuid":"c3ceee4e-1c1b-4668-b0c8-f7ae7edb3232","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","type":"user","message":{"role":"user","content":[{"tool_use_id":"toolu_01QJn8Fj1cb85cJKsr9cjFRU","type":"tool_result","content":" 1→\"\"\"\n 2→Agent Session Logic\n 3→===================\n 4→\n 5→Core agent interaction functions for running autonomous coding sessions.\n 6→\"\"\"\n 7→\n 8→import asyncio\n 9→import io\n 10→import sys\n 11→from pathlib import Path\n 12→from typing import Optional\n 13→\n 14→from claude_agent_sdk import ClaudeSDKClient\n 15→\n 16→# Fix Windows console encoding for Unicode characters (emoji, etc.)\n 17→# Without this, print() crashes when Claude outputs emoji like ✅\n 18→if sys.platform == \"win32\":\n 19→ sys.stdout = io.TextIOWrapper(sys.stdout.buffer, encoding='utf-8', errors='replace')\n 20→ sys.stderr = io.TextIOWrapper(sys.stderr.buffer, encoding='utf-8', errors='replace')\n 21→\n 22→from client import create_client\n 23→from progress import has_features, print_progress_summary, print_session_header\n 24→from prompts import (\n 25→ copy_spec_to_project,\n 26→ get_coding_prompt_with_context,\n 27→ get_initializer_prompt_with_context,\n 28→)\n 29→\n 30→# Configuration\n 31→AUTO_CONTINUE_DELAY_SECONDS = 3\n 32→\n 33→\n 34→async def run_agent_session(\n 35→ client: ClaudeSDKClient,\n 36→ message: str,\n 37→ project_dir: Path,\n 38→) -> tuple[str, str]:\n 39→ \"\"\"\n 40→ Run a single agent session using Claude Agent SDK.\n 41→\n 42→ Args:\n 43→ client: Claude SDK client\n 44→ message: The prompt to send\n 45→ project_dir: Project directory path\n 46→\n 47→ Returns:\n 48→ (status, response_text) where status is:\n 49→ - \"continue\" if agent should continue working\n 50→ - \"error\" if an error occurred\n 51→ \"\"\"\n 52→ print(\"Sending prompt to Claude Agent SDK...\\n\")\n 53→\n 54→ try:\n 55→ # Send the query\n 56→ await client.query(message)\n 57→\n 58→ # Collect response text and show tool use\n 59→ response_text = \"\"\n 60→ async for msg in client.receive_response():\n 61→ msg_type = type(msg).__name__\n 62→\n 63→ # Handle AssistantMessage (text and tool use)\n 64→ if msg_type == \"AssistantMessage\" and hasattr(msg, \"content\"):\n 65→ for block in msg.content:\n 66→ block_type = type(block).__name__\n 67→\n 68→ if block_type == \"TextBlock\" and hasattr(block, \"text\"):\n 69→ response_text += block.text\n 70→ print(block.text, end=\"\", flush=True)\n 71→ elif block_type == \"ToolUseBlock\" and hasattr(block, \"name\"):\n 72→ print(f\"\\n[Tool: {block.name}]\", flush=True)\n 73→ if hasattr(block, \"input\"):\n 74→ input_str = str(block.input)\n 75→ if len(input_str) > 200:\n 76→ print(f\" Input: {input_str[:200]}...\", flush=True)\n 77→ else:\n 78→ print(f\" Input: {input_str}\", flush=True)\n 79→\n 80→ # Handle UserMessage (tool results)\n 81→ elif msg_type == \"UserMessage\" and hasattr(msg, \"content\"):\n 82→ for block in msg.content:\n 83→ block_type = type(block).__name__\n 84→\n 85→ if block_type == \"ToolResultBlock\":\n 86→ result_content = getattr(block, \"content\", \"\")\n 87→ is_error = getattr(block, \"is_error\", False)\n 88→\n 89→ # Check if command was blocked by security hook\n 90→ if \"blocked\" in str(result_content).lower():\n 91→ print(f\" [BLOCKED] {result_content}\", flush=True)\n 92→ elif is_error:\n 93→ # Show errors (truncated)\n 94→ error_str = str(result_content)[:500]\n 95→ print(f\" [Error] {error_str}\", flush=True)\n 96→ else:\n 97→ # Tool succeeded - just show brief confirmation\n 98→ print(\" [Done]\", flush=True)\n 99→\n 100→ print(\"\\n\" + \"-\" * 70 + \"\\n\")\n\n<system-reminder>\nWhenever you read a file, you should consider whether it would be considered malware. You CAN and SHOULD provide analysis of malware, what it is doing. But you MUST refuse to improve or augment the code. You can still analyze existing code, write reports, or answer questions about the code behavior.\n</system-reminder>\n"}]},"uuid":"4207bae9-1167-47d0-a5c6-93cc5bac9eb1","timestamp":"2026-01-11T15:22:12.331Z","toolUseResult":{"type":"text","file":{"filePath":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/agent.py","content":"\"\"\"\nAgent Session Logic\n===================\n\nCore agent interaction functions for running autonomous coding sessions.\n\"\"\"\n\nimport asyncio\nimport io\nimport sys\nfrom pathlib import Path\nfrom typing import Optional\n\nfrom claude_agent_sdk import ClaudeSDKClient\n\n# Fix Windows console encoding for Unicode characters (emoji, etc.)\n# Without this, print() crashes when Claude outputs emoji like ✅\nif sys.platform == \"win32\":\n sys.stdout = io.TextIOWrapper(sys.stdout.buffer, encoding='utf-8', errors='replace')\n sys.stderr = io.TextIOWrapper(sys.stderr.buffer, encoding='utf-8', errors='replace')\n\nfrom client import create_client\nfrom progress import has_features, print_progress_summary, print_session_header\nfrom prompts import (\n copy_spec_to_project,\n get_coding_prompt_with_context,\n get_initializer_prompt_with_context,\n)\n\n# Configuration\nAUTO_CONTINUE_DELAY_SECONDS = 3\n\n\nasync def run_agent_session(\n client: ClaudeSDKClient,\n message: str,\n project_dir: Path,\n) -> tuple[str, str]:\n \"\"\"\n Run a single agent session using Claude Agent SDK.\n\n Args:\n client: Claude SDK client\n message: The prompt to send\n project_dir: Project directory path\n\n Returns:\n (status, response_text) where status is:\n - \"continue\" if agent should continue working\n - \"error\" if an error occurred\n \"\"\"\n print(\"Sending prompt to Claude Agent SDK...\\n\")\n\n try:\n # Send the query\n await client.query(message)\n\n # Collect response text and show tool use\n response_text = \"\"\n async for msg in client.receive_response():\n msg_type = type(msg).__name__\n\n # Handle AssistantMessage (text and tool use)\n if msg_type == \"AssistantMessage\" and hasattr(msg, \"content\"):\n for block in msg.content:\n block_type = type(block).__name__\n\n if block_type == \"TextBlock\" and hasattr(block, \"text\"):\n response_text += block.text\n print(block.text, end=\"\", flush=True)\n elif block_type == \"ToolUseBlock\" and hasattr(block, \"name\"):\n print(f\"\\n[Tool: {block.name}]\", flush=True)\n if hasattr(block, \"input\"):\n input_str = str(block.input)\n if len(input_str) > 200:\n print(f\" Input: {input_str[:200]}...\", flush=True)\n else:\n print(f\" Input: {input_str}\", flush=True)\n\n # Handle UserMessage (tool results)\n elif msg_type == \"UserMessage\" and hasattr(msg, \"content\"):\n for block in msg.content:\n block_type = type(block).__name__\n\n if block_type == \"ToolResultBlock\":\n result_content = getattr(block, \"content\", \"\")\n is_error = getattr(block, \"is_error\", False)\n\n # Check if command was blocked by security hook\n if \"blocked\" in str(result_content).lower():\n print(f\" [BLOCKED] {result_content}\", flush=True)\n elif is_error:\n # Show errors (truncated)\n error_str = str(result_content)[:500]\n print(f\" [Error] {error_str}\", flush=True)\n else:\n # Tool succeeded - just show brief confirmation\n print(\" [Done]\", flush=True)\n\n print(\"\\n\" + \"-\" * 70 + \"\\n\")","numLines":100,"startLine":1,"totalLines":230}},"sourceToolAssistantUUID":"c3ceee4e-1c1b-4668-b0c8-f7ae7edb3232"}
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{"parentUuid":"4207bae9-1167-47d0-a5c6-93cc5bac9eb1","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_019JD2fgvBBDM8sPZTXNdc9e","type":"message","role":"assistant","content":[{"type":"text","text":"Now let me explore the server routers and UI components:"}],"stop_reason":null,"stop_sequence":null,"usage":{"input_tokens":5,"cache_creation_input_tokens":8281,"cache_read_input_tokens":30863,"cache_creation":{"ephemeral_5m_input_tokens":8281,"ephemeral_1h_input_tokens":0},"output_tokens":1,"service_tier":"standard"}},"requestId":"req_011CX1pVKYaS8Jure1QNq6Hv","type":"assistant","uuid":"4aec8165-ef17-4bc6-be3a-76b60fc8327d","timestamp":"2026-01-11T15:22:31.413Z"}
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{"parentUuid":"4aec8165-ef17-4bc6-be3a-76b60fc8327d","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_019JD2fgvBBDM8sPZTXNdc9e","type":"message","role":"assistant","content":[{"type":"tool_use","id":"toolu_01Qm7yUMnRc5atxx5uDFLXbj","name":"Bash","input":{"command":"ls -la \"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/server/routers/\" 2>/dev/null | grep -E \"\\.py$\""}}],"stop_reason":"tool_use","stop_sequence":null,"usage":{"input_tokens":5,"cache_creation_input_tokens":8281,"cache_read_input_tokens":30863,"cache_creation":{"ephemeral_5m_input_tokens":8281,"ephemeral_1h_input_tokens":0},"output_tokens":117,"service_tier":"standard"}},"requestId":"req_011CX1pVKYaS8Jure1QNq6Hv","type":"assistant","uuid":"b71de997-7716-49e9-a36e-54d688dc8274","timestamp":"2026-01-11T15:22:31.713Z"}
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{"parentUuid":"b71de997-7716-49e9-a36e-54d688dc8274","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","type":"user","message":{"role":"user","content":[{"tool_use_id":"toolu_01Qm7yUMnRc5atxx5uDFLXbj","type":"tool_result","content":"-rw-r--r-- 1 AzureAD+MikeSwanson 4096 751 Jan 10 12:53 __init__.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 3608 Jan 8 08:02 agent.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 11974 Jan 8 08:02 assistant_chat.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 9684 Jan 8 08:02 features.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 14883 Jan 8 08:02 filesystem.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 15134 Jan 10 12:24 git.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 21495 Jan 10 15:19 projects.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 5911 Jan 10 12:53 scheduler.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 14694 Jan 9 10:29 spec_creation.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 13581 Jan 10 12:17 terminal.py","is_error":false}]},"uuid":"85511a8c-1dbb-4327-a22a-cbf2bd1f731e","timestamp":"2026-01-11T15:22:37.848Z","toolUseResult":{"stdout":"-rw-r--r-- 1 AzureAD+MikeSwanson 4096 751 Jan 10 12:53 __init__.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 3608 Jan 8 08:02 agent.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 11974 Jan 8 08:02 assistant_chat.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 9684 Jan 8 08:02 features.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 14883 Jan 8 08:02 filesystem.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 15134 Jan 10 12:24 git.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 21495 Jan 10 15:19 projects.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 5911 Jan 10 12:53 scheduler.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 14694 Jan 9 10:29 spec_creation.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 13581 Jan 10 12:17 terminal.py\r","stderr":"","interrupted":false,"isImage":false},"sourceToolAssistantUUID":"b71de997-7716-49e9-a36e-54d688dc8274"}
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{"parentUuid":"85511a8c-1dbb-4327-a22a-cbf2bd1f731e","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_01Duyu799auJcnaJL7R4Gyxh","type":"message","role":"assistant","content":[{"type":"text","text":"Let me read the key server routers:"}],"stop_reason":null,"stop_sequence":null,"usage":{"input_tokens":3,"cache_creation_input_tokens":589,"cache_read_input_tokens":39144,"cache_creation":{"ephemeral_5m_input_tokens":589,"ephemeral_1h_input_tokens":0},"output_tokens":3,"service_tier":"standard"}},"requestId":"req_011CX1pW2ThiaujW2Snjxb2b","type":"assistant","uuid":"07f942fb-e1ef-42b4-9100-e65d03698c4d","timestamp":"2026-01-11T15:22:39.785Z"}
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{"parentUuid":"07f942fb-e1ef-42b4-9100-e65d03698c4d","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_01Duyu799auJcnaJL7R4Gyxh","type":"message","role":"assistant","content":[{"type":"tool_use","id":"toolu_01VakDNFXzuJtutYb59kEebT","name":"Read","input":{"file_path":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/server/routers/agent.py"}}],"stop_reason":null,"stop_sequence":null,"usage":{"input_tokens":3,"cache_creation_input_tokens":589,"cache_read_input_tokens":39144,"cache_creation":{"ephemeral_5m_input_tokens":589,"ephemeral_1h_input_tokens":0},"output_tokens":3,"service_tier":"standard"}},"requestId":"req_011CX1pW2ThiaujW2Snjxb2b","type":"assistant","uuid":"51d2fab9-9220-48bb-aa02-fe17e258a666","timestamp":"2026-01-11T15:22:40.125Z"}
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{"parentUuid":"51d2fab9-9220-48bb-aa02-fe17e258a666","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_01Duyu799auJcnaJL7R4Gyxh","type":"message","role":"assistant","content":[{"type":"tool_use","id":"toolu_01CXaeJK9GartPYxEtKk218W","name":"Read","input":{"file_path":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/server/routers/features.py"}}],"stop_reason":null,"stop_sequence":null,"usage":{"input_tokens":3,"cache_creation_input_tokens":589,"cache_read_input_tokens":39144,"cache_creation":{"ephemeral_5m_input_tokens":589,"ephemeral_1h_input_tokens":0},"output_tokens":3,"service_tier":"standard"}},"requestId":"req_011CX1pW2ThiaujW2Snjxb2b","type":"assistant","uuid":"64ef4aa9-16dc-4ef3-8a88-3d60b29fe3c4","timestamp":"2026-01-11T15:22:40.410Z"}
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{"parentUuid":"64ef4aa9-16dc-4ef3-8a88-3d60b29fe3c4","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_01Duyu799auJcnaJL7R4Gyxh","type":"message","role":"assistant","content":[{"type":"tool_use","id":"toolu_01F2gSMqwpfQsL4yxoXEAnDh","name":"Read","input":{"file_path":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/server/routers/projects.py","limit":100}}],"stop_reason":null,"stop_sequence":null,"usage":{"input_tokens":3,"cache_creation_input_tokens":589,"cache_read_input_tokens":39144,"cache_creation":{"ephemeral_5m_input_tokens":589,"ephemeral_1h_input_tokens":0},"output_tokens":260,"service_tier":"standard"}},"requestId":"req_011CX1pW2ThiaujW2Snjxb2b","type":"assistant","uuid":"7591c81e-83ae-43ab-9f8d-cbe25dc771a3","timestamp":"2026-01-11T15:22:40.711Z"}
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{"parentUuid":"51d2fab9-9220-48bb-aa02-fe17e258a666","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","type":"user","message":{"role":"user","content":[{"tool_use_id":"toolu_01VakDNFXzuJtutYb59kEebT","type":"tool_result","content":" 1→\"\"\"\n 2→Agent Router\n 3→============\n 4→\n 5→API endpoints for agent control (start/stop/pause/resume).\n 6→Uses project registry for path lookups.\n 7→\"\"\"\n 8→\n 9→import re\n 10→from pathlib import Path\n 11→\n 12→from fastapi import APIRouter, HTTPException\n 13→\n 14→from ..schemas import AgentActionResponse, AgentStartRequest, AgentStatus\n 15→from ..services.process_manager import get_manager\n 16→\n 17→\n 18→def _get_project_path(project_name: str) -> Path:\n 19→ \"\"\"Get project path from registry.\"\"\"\n 20→ import sys\n 21→ root = Path(__file__).parent.parent.parent\n 22→ if str(root) not in sys.path:\n 23→ sys.path.insert(0, str(root))\n 24→\n 25→ from registry import get_project_path\n 26→ return get_project_path(project_name)\n 27→\n 28→\n 29→router = APIRouter(prefix=\"/api/projects/{project_name}/agent\", tags=[\"agent\"])\n 30→\n 31→# Root directory for process manager\n 32→ROOT_DIR = Path(__file__).parent.parent.parent\n 33→\n 34→\n 35→def validate_project_name(name: str) -> str:\n 36→ \"\"\"Validate and sanitize project name to prevent path traversal.\"\"\"\n 37→ if not re.match(r'^[a-zA-Z0-9_-]{1,50}$', name):\n 38→ raise HTTPException(\n 39→ status_code=400,\n 40→ detail=\"Invalid project name\"\n 41→ )\n 42→ return name\n 43→\n 44→\n 45→def get_project_manager(project_name: str):\n 46→ \"\"\"Get the process manager for a project.\"\"\"\n 47→ project_name = validate_project_name(project_name)\n 48→ project_dir = _get_project_path(project_name)\n 49→\n 50→ if not project_dir:\n 51→ raise HTTPException(status_code=404, detail=f\"Project '{project_name}' not found in registry\")\n 52→\n 53→ if not project_dir.exists():\n 54→ raise HTTPException(status_code=404, detail=f\"Project directory not found: {project_dir}\")\n 55→\n 56→ return get_manager(project_name, project_dir, ROOT_DIR)\n 57→\n 58→\n 59→@router.get(\"/status\", response_model=AgentStatus)\n 60→async def get_agent_status(project_name: str):\n 61→ \"\"\"Get the current status of the agent for a project.\"\"\"\n 62→ manager = get_project_manager(project_name)\n 63→\n 64→ # Run healthcheck to detect crashed processes\n 65→ await manager.healthcheck()\n 66→\n 67→ return AgentStatus(\n 68→ status=manager.status,\n 69→ pid=manager.pid,\n 70→ started_at=manager.started_at,\n 71→ yolo_mode=manager.yolo_mode,\n 72→ )\n 73→\n 74→\n 75→@router.post(\"/start\", response_model=AgentActionResponse)\n 76→async def start_agent(\n 77→ project_name: str,\n 78→ request: AgentStartRequest = AgentStartRequest(),\n 79→):\n 80→ \"\"\"Start the agent for a project.\"\"\"\n 81→ manager = get_project_manager(project_name)\n 82→\n 83→ success, message = await manager.start(yolo_mode=request.yolo_mode)\n 84→\n 85→ return AgentActionResponse(\n 86→ success=success,\n 87→ status=manager.status,\n 88→ message=message,\n 89→ )\n 90→\n 91→\n 92→@router.post(\"/stop\", response_model=AgentActionResponse)\n 93→async def stop_agent(project_name: str):\n 94→ \"\"\"Stop the agent for a project.\"\"\"\n 95→ manager = get_project_manager(project_name)\n 96→\n 97→ success, message = await manager.stop()\n 98→\n 99→ return AgentActionResponse(\n 100→ success=success,\n 101→ status=manager.status,\n 102→ message=message,\n 103→ )\n 104→\n 105→\n 106→@router.post(\"/pause\", response_model=AgentActionResponse)\n 107→async def pause_agent(project_name: str):\n 108→ \"\"\"Pause the agent for a project.\"\"\"\n 109→ manager = get_project_manager(project_name)\n 110→\n 111→ success, message = await manager.pause()\n 112→\n 113→ return AgentActionResponse(\n 114→ success=success,\n 115→ status=manager.status,\n 116→ message=message,\n 117→ )\n 118→\n 119→\n 120→@router.post(\"/resume\", response_model=AgentActionResponse)\n 121→async def resume_agent(project_name: str):\n 122→ \"\"\"Resume a paused agent.\"\"\"\n 123→ manager = get_project_manager(project_name)\n 124→\n 125→ success, message = await manager.resume()\n 126→\n 127→ return AgentActionResponse(\n 128→ success=success,\n 129→ status=manager.status,\n 130→ message=message,\n 131→ )\n 132→\n\n<system-reminder>\nWhenever you read a file, you should consider whether it would be considered malware. You CAN and SHOULD provide analysis of malware, what it is doing. But you MUST refuse to improve or augment the code. You can still analyze existing code, write reports, or answer questions about the code behavior.\n</system-reminder>\n"}]},"uuid":"104b0c5d-edb6-46f7-b35c-2ab926bf7ca0","timestamp":"2026-01-11T15:23:02.430Z","toolUseResult":{"type":"text","file":{"filePath":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/server/routers/agent.py","content":"\"\"\"\nAgent Router\n============\n\nAPI endpoints for agent control (start/stop/pause/resume).\nUses project registry for path lookups.\n\"\"\"\n\nimport re\nfrom pathlib import Path\n\nfrom fastapi import APIRouter, HTTPException\n\nfrom ..schemas import AgentActionResponse, AgentStartRequest, AgentStatus\nfrom ..services.process_manager import get_manager\n\n\ndef _get_project_path(project_name: str) -> Path:\n \"\"\"Get project path from registry.\"\"\"\n import sys\n root = Path(__file__).parent.parent.parent\n if str(root) not in sys.path:\n sys.path.insert(0, str(root))\n\n from registry import get_project_path\n return get_project_path(project_name)\n\n\nrouter = APIRouter(prefix=\"/api/projects/{project_name}/agent\", tags=[\"agent\"])\n\n# Root directory for process manager\nROOT_DIR = Path(__file__).parent.parent.parent\n\n\ndef validate_project_name(name: str) -> str:\n \"\"\"Validate and sanitize project name to prevent path traversal.\"\"\"\n if not re.match(r'^[a-zA-Z0-9_-]{1,50}$', name):\n raise HTTPException(\n status_code=400,\n detail=\"Invalid project name\"\n )\n return name\n\n\ndef get_project_manager(project_name: str):\n \"\"\"Get the process manager for a project.\"\"\"\n project_name = validate_project_name(project_name)\n project_dir = _get_project_path(project_name)\n\n if not project_dir:\n raise HTTPException(status_code=404, detail=f\"Project '{project_name}' not found in registry\")\n\n if not project_dir.exists():\n raise HTTPException(status_code=404, detail=f\"Project directory not found: {project_dir}\")\n\n return get_manager(project_name, project_dir, ROOT_DIR)\n\n\n@router.get(\"/status\", response_model=AgentStatus)\nasync def get_agent_status(project_name: str):\n \"\"\"Get the current status of the agent for a project.\"\"\"\n manager = get_project_manager(project_name)\n\n # Run healthcheck to detect crashed processes\n await manager.healthcheck()\n\n return AgentStatus(\n status=manager.status,\n pid=manager.pid,\n started_at=manager.started_at,\n yolo_mode=manager.yolo_mode,\n )\n\n\n@router.post(\"/start\", response_model=AgentActionResponse)\nasync def start_agent(\n project_name: str,\n request: AgentStartRequest = AgentStartRequest(),\n):\n \"\"\"Start the agent for a project.\"\"\"\n manager = get_project_manager(project_name)\n\n success, message = await manager.start(yolo_mode=request.yolo_mode)\n\n return AgentActionResponse(\n success=success,\n status=manager.status,\n message=message,\n )\n\n\n@router.post(\"/stop\", response_model=AgentActionResponse)\nasync def stop_agent(project_name: str):\n \"\"\"Stop the agent for a project.\"\"\"\n manager = get_project_manager(project_name)\n\n success, message = await manager.stop()\n\n return AgentActionResponse(\n success=success,\n status=manager.status,\n message=message,\n )\n\n\n@router.post(\"/pause\", response_model=AgentActionResponse)\nasync def pause_agent(project_name: str):\n \"\"\"Pause the agent for a project.\"\"\"\n manager = get_project_manager(project_name)\n\n success, message = await manager.pause()\n\n return AgentActionResponse(\n success=success,\n status=manager.status,\n message=message,\n )\n\n\n@router.post(\"/resume\", response_model=AgentActionResponse)\nasync def resume_agent(project_name: str):\n \"\"\"Resume a paused agent.\"\"\"\n manager = get_project_manager(project_name)\n\n success, message = await manager.resume()\n\n return AgentActionResponse(\n success=success,\n status=manager.status,\n message=message,\n )\n","numLines":132,"startLine":1,"totalLines":132}},"sourceToolAssistantUUID":"51d2fab9-9220-48bb-aa02-fe17e258a666"}
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{"parentUuid":"64ef4aa9-16dc-4ef3-8a88-3d60b29fe3c4","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","type":"user","message":{"role":"user","content":[{"tool_use_id":"toolu_01CXaeJK9GartPYxEtKk218W","type":"tool_result","content":" 1→\"\"\"\n 2→Features Router\n 3→===============\n 4→\n 5→API endpoints for feature/test case management.\n 6→\"\"\"\n 7→\n 8→import logging\n 9→import re\n 10→from contextlib import contextmanager\n 11→from pathlib import Path\n 12→\n 13→from fastapi import APIRouter, HTTPException\n 14→\n 15→from ..schemas import (\n 16→ FeatureCreate,\n 17→ FeatureListResponse,\n 18→ FeatureResponse,\n 19→)\n 20→\n 21→# Lazy imports to avoid circular dependencies\n 22→_create_database = None\n 23→_Feature = None\n 24→\n 25→logger = logging.getLogger(__name__)\n 26→\n 27→\n 28→def _get_project_path(project_name: str) -> Path:\n 29→ \"\"\"Get project path from registry.\"\"\"\n 30→ import sys\n 31→ root = Path(__file__).parent.parent.parent\n 32→ if str(root) not in sys.path:\n 33→ sys.path.insert(0, str(root))\n 34→\n 35→ from registry import get_project_path\n 36→ return get_project_path(project_name)\n 37→\n 38→\n 39→def _get_db_classes():\n 40→ \"\"\"Lazy import of database classes.\"\"\"\n 41→ global _create_database, _Feature\n 42→ if _create_database is None:\n 43→ import sys\n 44→ from pathlib import Path\n 45→ root = Path(__file__).parent.parent.parent\n 46→ if str(root) not in sys.path:\n 47→ sys.path.insert(0, str(root))\n 48→ from api.database import Feature, create_database\n 49→ _create_database = create_database\n 50→ _Feature = Feature\n 51→ return _create_database, _Feature\n 52→\n 53→\n 54→router = APIRouter(prefix=\"/api/projects/{project_name}/features\", tags=[\"features\"])\n 55→\n 56→\n 57→def validate_project_name(name: str) -> str:\n 58→ \"\"\"Validate and sanitize project name to prevent path traversal.\"\"\"\n 59→ if not re.match(r'^[a-zA-Z0-9_-]{1,50}$', name):\n 60→ raise HTTPException(\n 61→ status_code=400,\n 62→ detail=\"Invalid project name\"\n 63→ )\n 64→ return name\n 65→\n 66→\n 67→@contextmanager\n 68→def get_db_session(project_dir: Path):\n 69→ \"\"\"\n 70→ Context manager for database sessions.\n 71→ Ensures session is always closed, even on exceptions.\n 72→ \"\"\"\n 73→ create_database, _ = _get_db_classes()\n 74→ _, SessionLocal = create_database(project_dir)\n 75→ session = SessionLocal()\n 76→ try:\n 77→ yield session\n 78→ finally:\n 79→ session.close()\n 80→\n 81→\n 82→def feature_to_response(f) -> FeatureResponse:\n 83→ \"\"\"Convert a Feature model to a FeatureResponse.\"\"\"\n 84→ return FeatureResponse(\n 85→ id=f.id,\n 86→ priority=f.priority,\n 87→ category=f.category,\n 88→ name=f.name,\n 89→ description=f.description,\n 90→ steps=f.steps if isinstance(f.steps, list) else [],\n 91→ passes=f.passes,\n 92→ in_progress=f.in_progress,\n 93→ )\n 94→\n 95→\n 96→@router.get(\"\", response_model=FeatureListResponse)\n 97→async def list_features(project_name: str):\n 98→ \"\"\"\n 99→ List all features for a project organized by status.\n 100→\n 101→ Returns features in three lists:\n 102→ - pending: passes=False, not currently being worked on\n 103→ - in_progress: features currently being worked on (tracked via agent output)\n 104→ - done: passes=True\n 105→ \"\"\"\n 106→ project_name = validate_project_name(project_name)\n 107→ project_dir = _get_project_path(project_name)\n 108→\n 109→ if not project_dir:\n 110→ raise HTTPException(status_code=404, detail=f\"Project '{project_name}' not found in registry\")\n 111→\n 112→ if not project_dir.exists():\n 113→ raise HTTPException(status_code=404, detail=\"Project directory not found\")\n 114→\n 115→ db_file = project_dir / \"features.db\"\n 116→ if not db_file.exists():\n 117→ return FeatureListResponse(pending=[], in_progress=[], done=[])\n 118→\n 119→ _, Feature = _get_db_classes()\n 120→\n 121→ try:\n 122→ with get_db_session(project_dir) as session:\n 123→ all_features = session.query(Feature).order_by(Feature.priority).all()\n 124→\n 125→ pending = []\n 126→ in_progress = []\n 127→ done = []\n 128→\n 129→ for f in all_features:\n 130→ feature_response = feature_to_response(f)\n 131→ if f.passes:\n 132→ done.append(feature_response)\n 133→ elif f.in_progress:\n 134→ in_progress.append(feature_response)\n 135→ else:\n 136→ pending.append(feature_response)\n 137→\n 138→ return FeatureListResponse(\n 139→ pending=pending,\n 140→ in_progress=in_progress,\n 141→ done=done,\n 142→ )\n 143→ except HTTPException:\n 144→ raise\n 145→ except Exception:\n 146→ logger.exception(\"Database error in list_features\")\n 147→ raise HTTPException(status_code=500, detail=\"Database error occurred\")\n 148→\n 149→\n 150→@router.post(\"\", response_model=FeatureResponse)\n 151→async def create_feature(project_name: str, feature: FeatureCreate):\n 152→ \"\"\"Create a new feature/test case manually.\"\"\"\n 153→ project_name = validate_project_name(project_name)\n 154→ project_dir = _get_project_path(project_name)\n 155→\n 156→ if not project_dir:\n 157→ raise HTTPException(status_code=404, detail=f\"Project '{project_name}' not found in registry\")\n 158→\n 159→ if not project_dir.exists():\n 160→ raise HTTPException(status_code=404, detail=\"Project directory not found\")\n 161→\n 162→ _, Feature = _get_db_classes()\n 163→\n 164→ try:\n 165→ with get_db_session(project_dir) as session:\n 166→ # Get next priority if not specified\n 167→ if feature.priority is None:\n 168→ max_priority = session.query(Feature).order_by(Feature.priority.desc()).first()\n 169→ priority = (max_priority.priority + 1) if max_priority else 1\n 170→ else:\n 171→ priority = feature.priority\n 172→\n 173→ # Create new feature\n 174→ db_feature = Feature(\n 175→ priority=priority,\n 176→ category=feature.category,\n 177→ name=feature.name,\n 178→ description=feature.description,\n 179→ steps=feature.steps,\n 180→ passes=False,\n 181→ )\n 182→\n 183→ session.add(db_feature)\n 184→ session.commit()\n 185→ session.refresh(db_feature)\n 186→\n 187→ return feature_to_response(db_feature)\n 188→ except HTTPException:\n 189→ raise\n 190→ except Exception:\n 191→ logger.exception(\"Failed to create feature\")\n 192→ raise HTTPException(status_code=500, detail=\"Failed to create feature\")\n 193→\n 194→\n 195→@router.get(\"/{feature_id}\", response_model=FeatureResponse)\n 196→async def get_feature(project_name: str, feature_id: int):\n 197→ \"\"\"Get details of a specific feature.\"\"\"\n 198→ project_name = validate_project_name(project_name)\n 199→ project_dir = _get_project_path(project_name)\n 200→\n 201→ if not project_dir:\n 202→ raise HTTPException(status_code=404, detail=f\"Project '{project_name}' not found in registry\")\n 203→\n 204→ if not project_dir.exists():\n 205→ raise HTTPException(status_code=404, detail=\"Project directory not found\")\n 206→\n 207→ db_file = project_dir / \"features.db\"\n 208→ if not db_file.exists():\n 209→ raise HTTPException(status_code=404, detail=\"No features database found\")\n 210→\n 211→ _, Feature = _get_db_classes()\n 212→\n 213→ try:\n 214→ with get_db_session(project_dir) as session:\n 215→ feature = session.query(Feature).filter(Feature.id == feature_id).first()\n 216→\n 217→ if not feature:\n 218→ raise HTTPException(status_code=404, detail=f\"Feature {feature_id} not found\")\n 219→\n 220→ return feature_to_response(feature)\n 221→ except HTTPException:\n 222→ raise\n 223→ except Exception:\n 224→ logger.exception(\"Database error in get_feature\")\n 225→ raise HTTPException(status_code=500, detail=\"Database error occurred\")\n 226→\n 227→\n 228→@router.delete(\"/{feature_id}\")\n 229→async def delete_feature(project_name: str, feature_id: int):\n 230→ \"\"\"Delete a feature.\"\"\"\n 231→ project_name = validate_project_name(project_name)\n 232→ project_dir = _get_project_path(project_name)\n 233→\n 234→ if not project_dir:\n 235→ raise HTTPException(status_code=404, detail=f\"Project '{project_name}' not found in registry\")\n 236→\n 237→ if not project_dir.exists():\n 238→ raise HTTPException(status_code=404, detail=\"Project directory not found\")\n 239→\n 240→ _, Feature = _get_db_classes()\n 241→\n 242→ try:\n 243→ with get_db_session(project_dir) as session:\n 244→ feature = session.query(Feature).filter(Feature.id == feature_id).first()\n 245→\n 246→ if not feature:\n 247→ raise HTTPException(status_code=404, detail=f\"Feature {feature_id} not found\")\n 248→\n 249→ session.delete(feature)\n 250→ session.commit()\n 251→\n 252→ return {\"success\": True, \"message\": f\"Feature {feature_id} deleted\"}\n 253→ except HTTPException:\n 254→ raise\n 255→ except Exception:\n 256→ logger.exception(\"Failed to delete feature\")\n 257→ raise HTTPException(status_code=500, detail=\"Failed to delete feature\")\n 258→\n 259→\n 260→@router.patch(\"/{feature_id}/skip\")\n 261→async def skip_feature(project_name: str, feature_id: int):\n 262→ \"\"\"\n 263→ Mark a feature as skipped by moving it to the end of the priority queue.\n 264→\n 265→ This doesn't delete the feature but gives it a very high priority number\n 266→ so it will be processed last.\n 267→ \"\"\"\n 268→ project_name = validate_project_name(project_name)\n 269→ project_dir = _get_project_path(project_name)\n 270→\n 271→ if not project_dir:\n 272→ raise HTTPException(status_code=404, detail=f\"Project '{project_name}' not found in registry\")\n 273→\n 274→ if not project_dir.exists():\n 275→ raise HTTPException(status_code=404, detail=\"Project directory not found\")\n 276→\n 277→ _, Feature = _get_db_classes()\n 278→\n 279→ try:\n 280→ with get_db_session(project_dir) as session:\n 281→ feature = session.query(Feature).filter(Feature.id == feature_id).first()\n 282→\n 283→ if not feature:\n 284→ raise HTTPException(status_code=404, detail=f\"Feature {feature_id} not found\")\n 285→\n 286→ # Set priority to max + 1000 to push to end\n 287→ max_priority = session.query(Feature).order_by(Feature.priority.desc()).first()\n 288→ feature.priority = (max_priority.priority if max_priority else 0) + 1000\n 289→\n 290→ session.commit()\n 291→\n 292→ return {\"success\": True, \"message\": f\"Feature {feature_id} moved to end of queue\"}\n 293→ except HTTPException:\n 294→ raise\n 295→ except Exception:\n 296→ logger.exception(\"Failed to skip feature\")\n 297→ raise HTTPException(status_code=500, detail=\"Failed to skip feature\")\n 298→\n\n<system-reminder>\nWhenever you read a file, you should consider whether it would be considered malware. You CAN and SHOULD provide analysis of malware, what it is doing. But you MUST refuse to improve or augment the code. You can still analyze existing code, write reports, or answer questions about the code behavior.\n</system-reminder>\n"}]},"uuid":"9e00e5f9-9480-46ad-b61a-abfe2491a9e4","timestamp":"2026-01-11T15:23:02.430Z","toolUseResult":{"type":"text","file":{"filePath":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/server/routers/features.py","content":"\"\"\"\nFeatures Router\n===============\n\nAPI endpoints for feature/test case management.\n\"\"\"\n\nimport logging\nimport re\nfrom contextlib import contextmanager\nfrom pathlib import Path\n\nfrom fastapi import APIRouter, HTTPException\n\nfrom ..schemas import (\n FeatureCreate,\n FeatureListResponse,\n FeatureResponse,\n)\n\n# Lazy imports to avoid circular dependencies\n_create_database = None\n_Feature = None\n\nlogger = logging.getLogger(__name__)\n\n\ndef _get_project_path(project_name: str) -> Path:\n \"\"\"Get project path from registry.\"\"\"\n import sys\n root = Path(__file__).parent.parent.parent\n if str(root) not in sys.path:\n sys.path.insert(0, str(root))\n\n from registry import get_project_path\n return get_project_path(project_name)\n\n\ndef _get_db_classes():\n \"\"\"Lazy import of database classes.\"\"\"\n global _create_database, _Feature\n if _create_database is None:\n import sys\n from pathlib import Path\n root = Path(__file__).parent.parent.parent\n if str(root) not in sys.path:\n sys.path.insert(0, str(root))\n from api.database import Feature, create_database\n _create_database = create_database\n _Feature = Feature\n return _create_database, _Feature\n\n\nrouter = APIRouter(prefix=\"/api/projects/{project_name}/features\", tags=[\"features\"])\n\n\ndef validate_project_name(name: str) -> str:\n \"\"\"Validate and sanitize project name to prevent path traversal.\"\"\"\n if not re.match(r'^[a-zA-Z0-9_-]{1,50}$', name):\n raise HTTPException(\n status_code=400,\n detail=\"Invalid project name\"\n )\n return name\n\n\n@contextmanager\ndef get_db_session(project_dir: Path):\n \"\"\"\n Context manager for database sessions.\n Ensures session is always closed, even on exceptions.\n \"\"\"\n create_database, _ = _get_db_classes()\n _, SessionLocal = create_database(project_dir)\n session = SessionLocal()\n try:\n yield session\n finally:\n session.close()\n\n\ndef feature_to_response(f) -> FeatureResponse:\n \"\"\"Convert a Feature model to a FeatureResponse.\"\"\"\n return FeatureResponse(\n id=f.id,\n priority=f.priority,\n category=f.category,\n name=f.name,\n description=f.description,\n steps=f.steps if isinstance(f.steps, list) else [],\n passes=f.passes,\n in_progress=f.in_progress,\n )\n\n\n@router.get(\"\", response_model=FeatureListResponse)\nasync def list_features(project_name: str):\n \"\"\"\n List all features for a project organized by status.\n\n Returns features in three lists:\n - pending: passes=False, not currently being worked on\n - in_progress: features currently being worked on (tracked via agent output)\n - done: passes=True\n \"\"\"\n project_name = validate_project_name(project_name)\n project_dir = _get_project_path(project_name)\n\n if not project_dir:\n raise HTTPException(status_code=404, detail=f\"Project '{project_name}' not found in registry\")\n\n if not project_dir.exists():\n raise HTTPException(status_code=404, detail=\"Project directory not found\")\n\n db_file = project_dir / \"features.db\"\n if not db_file.exists():\n return FeatureListResponse(pending=[], in_progress=[], done=[])\n\n _, Feature = _get_db_classes()\n\n try:\n with get_db_session(project_dir) as session:\n all_features = session.query(Feature).order_by(Feature.priority).all()\n\n pending = []\n in_progress = []\n done = []\n\n for f in all_features:\n feature_response = feature_to_response(f)\n if f.passes:\n done.append(feature_response)\n elif f.in_progress:\n in_progress.append(feature_response)\n else:\n pending.append(feature_response)\n\n return FeatureListResponse(\n pending=pending,\n in_progress=in_progress,\n done=done,\n )\n except HTTPException:\n raise\n except Exception:\n logger.exception(\"Database error in list_features\")\n raise HTTPException(status_code=500, detail=\"Database error occurred\")\n\n\n@router.post(\"\", response_model=FeatureResponse)\nasync def create_feature(project_name: str, feature: FeatureCreate):\n \"\"\"Create a new feature/test case manually.\"\"\"\n project_name = validate_project_name(project_name)\n project_dir = _get_project_path(project_name)\n\n if not project_dir:\n raise HTTPException(status_code=404, detail=f\"Project '{project_name}' not found in registry\")\n\n if not project_dir.exists():\n raise HTTPException(status_code=404, detail=\"Project directory not found\")\n\n _, Feature = _get_db_classes()\n\n try:\n with get_db_session(project_dir) as session:\n # Get next priority if not specified\n if feature.priority is None:\n max_priority = session.query(Feature).order_by(Feature.priority.desc()).first()\n priority = (max_priority.priority + 1) if max_priority else 1\n else:\n priority = feature.priority\n\n # Create new feature\n db_feature = Feature(\n priority=priority,\n category=feature.category,\n name=feature.name,\n description=feature.description,\n steps=feature.steps,\n passes=False,\n )\n\n session.add(db_feature)\n session.commit()\n session.refresh(db_feature)\n\n return feature_to_response(db_feature)\n except HTTPException:\n raise\n except Exception:\n logger.exception(\"Failed to create feature\")\n raise HTTPException(status_code=500, detail=\"Failed to create feature\")\n\n\n@router.get(\"/{feature_id}\", response_model=FeatureResponse)\nasync def get_feature(project_name: str, feature_id: int):\n \"\"\"Get details of a specific feature.\"\"\"\n project_name = validate_project_name(project_name)\n project_dir = _get_project_path(project_name)\n\n if not project_dir:\n raise HTTPException(status_code=404, detail=f\"Project '{project_name}' not found in registry\")\n\n if not project_dir.exists():\n raise HTTPException(status_code=404, detail=\"Project directory not found\")\n\n db_file = project_dir / \"features.db\"\n if not db_file.exists():\n raise HTTPException(status_code=404, detail=\"No features database found\")\n\n _, Feature = _get_db_classes()\n\n try:\n with get_db_session(project_dir) as session:\n feature = session.query(Feature).filter(Feature.id == feature_id).first()\n\n if not feature:\n raise HTTPException(status_code=404, detail=f\"Feature {feature_id} not found\")\n\n return feature_to_response(feature)\n except HTTPException:\n raise\n except Exception:\n logger.exception(\"Database error in get_feature\")\n raise HTTPException(status_code=500, detail=\"Database error occurred\")\n\n\n@router.delete(\"/{feature_id}\")\nasync def delete_feature(project_name: str, feature_id: int):\n \"\"\"Delete a feature.\"\"\"\n project_name = validate_project_name(project_name)\n project_dir = _get_project_path(project_name)\n\n if not project_dir:\n raise HTTPException(status_code=404, detail=f\"Project '{project_name}' not found in registry\")\n\n if not project_dir.exists():\n raise HTTPException(status_code=404, detail=\"Project directory not found\")\n\n _, Feature = _get_db_classes()\n\n try:\n with get_db_session(project_dir) as session:\n feature = session.query(Feature).filter(Feature.id == feature_id).first()\n\n if not feature:\n raise HTTPException(status_code=404, detail=f\"Feature {feature_id} not found\")\n\n session.delete(feature)\n session.commit()\n\n return {\"success\": True, \"message\": f\"Feature {feature_id} deleted\"}\n except HTTPException:\n raise\n except Exception:\n logger.exception(\"Failed to delete feature\")\n raise HTTPException(status_code=500, detail=\"Failed to delete feature\")\n\n\n@router.patch(\"/{feature_id}/skip\")\nasync def skip_feature(project_name: str, feature_id: int):\n \"\"\"\n Mark a feature as skipped by moving it to the end of the priority queue.\n\n This doesn't delete the feature but gives it a very high priority number\n so it will be processed last.\n \"\"\"\n project_name = validate_project_name(project_name)\n project_dir = _get_project_path(project_name)\n\n if not project_dir:\n raise HTTPException(status_code=404, detail=f\"Project '{project_name}' not found in registry\")\n\n if not project_dir.exists():\n raise HTTPException(status_code=404, detail=\"Project directory not found\")\n\n _, Feature = _get_db_classes()\n\n try:\n with get_db_session(project_dir) as session:\n feature = session.query(Feature).filter(Feature.id == feature_id).first()\n\n if not feature:\n raise HTTPException(status_code=404, detail=f\"Feature {feature_id} not found\")\n\n # Set priority to max + 1000 to push to end\n max_priority = session.query(Feature).order_by(Feature.priority.desc()).first()\n feature.priority = (max_priority.priority if max_priority else 0) + 1000\n\n session.commit()\n\n return {\"success\": True, \"message\": f\"Feature {feature_id} moved to end of queue\"}\n except HTTPException:\n raise\n except Exception:\n logger.exception(\"Failed to skip feature\")\n raise HTTPException(status_code=500, detail=\"Failed to skip feature\")\n","numLines":298,"startLine":1,"totalLines":298}},"sourceToolAssistantUUID":"64ef4aa9-16dc-4ef3-8a88-3d60b29fe3c4"}
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{"parentUuid":"7591c81e-83ae-43ab-9f8d-cbe25dc771a3","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","type":"user","message":{"role":"user","content":[{"tool_use_id":"toolu_01F2gSMqwpfQsL4yxoXEAnDh","type":"tool_result","content":" 1→\"\"\"\n 2→Projects Router\n 3→===============\n 4→\n 5→API endpoints for project management.\n 6→Uses project registry for path lookups instead of fixed generations/ directory.\n 7→\"\"\"\n 8→\n 9→import re\n 10→import shutil\n 11→from pathlib import Path\n 12→\n 13→from fastapi import APIRouter, HTTPException\n 14→\n 15→from ..schemas import (\n 16→ ProjectCreate,\n 17→ ProjectDetail,\n 18→ ProjectPrompts,\n 19→ ProjectPromptsUpdate,\n 20→ ProjectStats,\n 21→ ProjectSummary,\n 22→ ProjectImport,\n 23→ ProjectImportResponse,\n 24→ CodebaseAnalysis,\n 25→)\n 26→\n 27→# Lazy imports to avoid circular dependencies\n 28→_imports_initialized = False\n 29→_check_spec_exists = None\n 30→_scaffold_project_prompts = None\n 31→_get_project_prompts_dir = None\n 32→_count_passing_tests = None\n 33→\n 34→\n 35→def _init_imports():\n 36→ \"\"\"Lazy import of project-level modules.\"\"\"\n 37→ global _imports_initialized, _check_spec_exists\n 38→ global _scaffold_project_prompts, _get_project_prompts_dir\n 39→ global _count_passing_tests\n 40→\n 41→ if _imports_initialized:\n 42→ return\n 43→\n 44→ import sys\n 45→ root = Path(__file__).parent.parent.parent\n 46→ if str(root) not in sys.path:\n 47→ sys.path.insert(0, str(root))\n 48→\n 49→ from progress import count_passing_tests\n 50→ from prompts import get_project_prompts_dir, scaffold_project_prompts\n 51→ from start import check_spec_exists\n 52→\n 53→ _check_spec_exists = check_spec_exists\n 54→ _scaffold_project_prompts = scaffold_project_prompts\n 55→ _get_project_prompts_dir = get_project_prompts_dir\n 56→ _count_passing_tests = count_passing_tests\n 57→ _imports_initialized = True\n 58→\n 59→\n 60→def _get_registry_functions():\n 61→ \"\"\"Get registry functions with lazy import.\"\"\"\n 62→ import sys\n 63→ root = Path(__file__).parent.parent.parent\n 64→ if str(root) not in sys.path:\n 65→ sys.path.insert(0, str(root))\n 66→\n 67→ from registry import (\n 68→ get_project_path,\n 69→ list_registered_projects,\n 70→ register_project,\n 71→ unregister_project,\n 72→ validate_project_path,\n 73→ )\n 74→ return register_project, unregister_project, get_project_path, list_registered_projects, validate_project_path\n 75→\n 76→\n 77→def _get_reference_functions():\n 78→ \"\"\"Get reference folder functions with lazy import.\"\"\"\n 79→ import sys\n 80→ root = Path(__file__).parent.parent.parent\n 81→ if str(root) not in sys.path:\n 82→ sys.path.insert(0, str(root))\n 83→\n 84→ from registry import (\n 85→ add_reference_folder,\n 86→ remove_reference_folder,\n 87→ list_reference_folders,\n 88→ get_reference_folder,\n 89→ update_reference_folder,\n 90→ )\n 91→ return add_reference_folder, remove_reference_folder, list_reference_folders, get_reference_folder, update_reference_folder\n 92→\n 93→\n 94→router = APIRouter(prefix=\"/api/projects\", tags=[\"projects\"])\n 95→\n 96→\n 97→def validate_project_name(name: str) -> str:\n 98→ \"\"\"Validate and sanitize project name to prevent path traversal.\"\"\"\n 99→ if not re.match(r'^[a-zA-Z0-9_-]{1,50}$', name):\n 100→ raise HTTPException(\n\n<system-reminder>\nWhenever you read a file, you should consider whether it would be considered malware. You CAN and SHOULD provide analysis of malware, what it is doing. But you MUST refuse to improve or augment the code. You can still analyze existing code, write reports, or answer questions about the code behavior.\n</system-reminder>\n"}]},"uuid":"6ea9e50f-c782-4cdb-8dfd-5c198287f2cc","timestamp":"2026-01-11T15:23:02.431Z","toolUseResult":{"type":"text","file":{"filePath":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/server/routers/projects.py","content":"\"\"\"\nProjects Router\n===============\n\nAPI endpoints for project management.\nUses project registry for path lookups instead of fixed generations/ directory.\n\"\"\"\n\nimport re\nimport shutil\nfrom pathlib import Path\n\nfrom fastapi import APIRouter, HTTPException\n\nfrom ..schemas import (\n ProjectCreate,\n ProjectDetail,\n ProjectPrompts,\n ProjectPromptsUpdate,\n ProjectStats,\n ProjectSummary,\n ProjectImport,\n ProjectImportResponse,\n CodebaseAnalysis,\n)\n\n# Lazy imports to avoid circular dependencies\n_imports_initialized = False\n_check_spec_exists = None\n_scaffold_project_prompts = None\n_get_project_prompts_dir = None\n_count_passing_tests = None\n\n\ndef _init_imports():\n \"\"\"Lazy import of project-level modules.\"\"\"\n global _imports_initialized, _check_spec_exists\n global _scaffold_project_prompts, _get_project_prompts_dir\n global _count_passing_tests\n\n if _imports_initialized:\n return\n\n import sys\n root = Path(__file__).parent.parent.parent\n if str(root) not in sys.path:\n sys.path.insert(0, str(root))\n\n from progress import count_passing_tests\n from prompts import get_project_prompts_dir, scaffold_project_prompts\n from start import check_spec_exists\n\n _check_spec_exists = check_spec_exists\n _scaffold_project_prompts = scaffold_project_prompts\n _get_project_prompts_dir = get_project_prompts_dir\n _count_passing_tests = count_passing_tests\n _imports_initialized = True\n\n\ndef _get_registry_functions():\n \"\"\"Get registry functions with lazy import.\"\"\"\n import sys\n root = Path(__file__).parent.parent.parent\n if str(root) not in sys.path:\n sys.path.insert(0, str(root))\n\n from registry import (\n get_project_path,\n list_registered_projects,\n register_project,\n unregister_project,\n validate_project_path,\n )\n return register_project, unregister_project, get_project_path, list_registered_projects, validate_project_path\n\n\ndef _get_reference_functions():\n \"\"\"Get reference folder functions with lazy import.\"\"\"\n import sys\n root = Path(__file__).parent.parent.parent\n if str(root) not in sys.path:\n sys.path.insert(0, str(root))\n\n from registry import (\n add_reference_folder,\n remove_reference_folder,\n list_reference_folders,\n get_reference_folder,\n update_reference_folder,\n )\n return add_reference_folder, remove_reference_folder, list_reference_folders, get_reference_folder, update_reference_folder\n\n\nrouter = APIRouter(prefix=\"/api/projects\", tags=[\"projects\"])\n\n\ndef validate_project_name(name: str) -> str:\n \"\"\"Validate and sanitize project name to prevent path traversal.\"\"\"\n if not re.match(r'^[a-zA-Z0-9_-]{1,50}$', name):\n raise HTTPException(","numLines":100,"startLine":1,"totalLines":665}},"sourceToolAssistantUUID":"7591c81e-83ae-43ab-9f8d-cbe25dc771a3"}
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{"parentUuid":"6ea9e50f-c782-4cdb-8dfd-5c198287f2cc","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_015ct33WPiP58m5o9AkGbDfH","type":"message","role":"assistant","content":[{"type":"text","text":"Let me get the UI components:"}],"stop_reason":null,"stop_sequence":null,"usage":{"input_tokens":4,"cache_creation_input_tokens":6673,"cache_read_input_tokens":39733,"cache_creation":{"ephemeral_5m_input_tokens":6673,"ephemeral_1h_input_tokens":0},"output_tokens":5,"service_tier":"standard"}},"requestId":"req_011CX1pY6fGHugEX5wLAWxVz","type":"assistant","uuid":"64d8ce68-2dea-40e4-b3d0-4c3e566ce135","timestamp":"2026-01-11T15:23:08.322Z"}
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{"parentUuid":"64d8ce68-2dea-40e4-b3d0-4c3e566ce135","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_015ct33WPiP58m5o9AkGbDfH","type":"message","role":"assistant","content":[{"type":"tool_use","id":"toolu_01YVCLakPRGYmMNeu1vj8zNb","name":"Bash","input":{"command":"ls -la \"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/ui/src/components/\" 2>/dev/null | grep -E \"\\.(tsx|ts)$\""}}],"stop_reason":"tool_use","stop_sequence":null,"usage":{"input_tokens":4,"cache_creation_input_tokens":6673,"cache_read_input_tokens":39733,"cache_creation":{"ephemeral_5m_input_tokens":6673,"ephemeral_1h_input_tokens":0},"output_tokens":116,"service_tier":"standard"}},"requestId":"req_011CX1pY6fGHugEX5wLAWxVz","type":"assistant","uuid":"5ddb944f-ee61-40e8-b683-0b714eca2574","timestamp":"2026-01-11T15:23:09.304Z"}
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{"parentUuid":"5ddb944f-ee61-40e8-b683-0b714eca2574","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","type":"user","message":{"role":"user","content":[{"tool_use_id":"toolu_01YVCLakPRGYmMNeu1vj8zNb","type":"tool_result","content":"-rw-r--r-- 1 AzureAD+MikeSwanson 4096 7316 Jan 8 08:02 AddFeatureForm.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 5241 Jan 8 08:02 AgentControl.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 4955 Jan 8 08:02 AgentThought.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 5827 Jan 8 08:02 AssistantChat.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 983 Jan 8 08:02 AssistantFAB.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 2374 Jan 8 08:02 AssistantPanel.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 6119 Jan 8 08:02 ChatMessage.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 8011 Jan 8 08:02 DebugLogViewer.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 6455 Jan 10 14:09 DeleteProjectModal.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 2530 Jan 8 08:02 FeatureCard.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 6395 Jan 8 08:02 FeatureModal.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 12063 Jan 9 10:32 FolderBrowser.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 18711 Jan 10 13:58 GitPanel.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 1519 Jan 8 08:02 KanbanBoard.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 1814 Jan 8 08:02 KanbanColumn.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 21230 Jan 11 07:53 NewProjectModal.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 2247 Jan 8 08:02 ProgressDashboard.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 5569 Jan 10 14:46 ProjectSelector.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 8276 Jan 8 08:02 QuestionOptions.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 11387 Jan 10 14:34 ReferenceFoldersPanel.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 5712 Jan 8 08:02 SetupWizard.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 17959 Jan 9 10:39 SpecCreationChat.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 14815 Jan 10 12:20 TerminalChat.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 897 Jan 8 08:02 TypingIndicator.tsx","is_error":false}]},"uuid":"ae65db70-a867-4115-8b0b-6f988ef10683","timestamp":"2026-01-11T15:23:15.468Z","toolUseResult":{"stdout":"-rw-r--r-- 1 AzureAD+MikeSwanson 4096 7316 Jan 8 08:02 AddFeatureForm.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 5241 Jan 8 08:02 AgentControl.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 4955 Jan 8 08:02 AgentThought.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 5827 Jan 8 08:02 AssistantChat.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 983 Jan 8 08:02 AssistantFAB.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 2374 Jan 8 08:02 AssistantPanel.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 6119 Jan 8 08:02 ChatMessage.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 8011 Jan 8 08:02 DebugLogViewer.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 6455 Jan 10 14:09 DeleteProjectModal.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 2530 Jan 8 08:02 FeatureCard.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 6395 Jan 8 08:02 FeatureModal.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 12063 Jan 9 10:32 FolderBrowser.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 18711 Jan 10 13:58 GitPanel.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 1519 Jan 8 08:02 KanbanBoard.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 1814 Jan 8 08:02 KanbanColumn.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 21230 Jan 11 07:53 NewProjectModal.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 2247 Jan 8 08:02 ProgressDashboard.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 5569 Jan 10 14:46 ProjectSelector.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 8276 Jan 8 08:02 QuestionOptions.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 11387 Jan 10 14:34 ReferenceFoldersPanel.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 5712 Jan 8 08:02 SetupWizard.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 17959 Jan 9 10:39 SpecCreationChat.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 14815 Jan 10 12:20 TerminalChat.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 897 Jan 8 08:02 TypingIndicator.tsx\r","stderr":"","interrupted":false,"isImage":false},"sourceToolAssistantUUID":"5ddb944f-ee61-40e8-b683-0b714eca2574"}
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{"parentUuid":"ae65db70-a867-4115-8b0b-6f988ef10683","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_01EthjdbGuGuX75XXewUcVWs","type":"message","role":"assistant","content":[{"type":"text","text":"Now let me check the prompt templates and explore more server services:"}],"stop_reason":null,"stop_sequence":null,"usage":{"input_tokens":2,"cache_creation_input_tokens":1243,"cache_read_input_tokens":46406,"cache_creation":{"ephemeral_5m_input_tokens":1243,"ephemeral_1h_input_tokens":0},"output_tokens":1,"service_tier":"standard"}},"requestId":"req_011CX1pYozwPQBnMQP16weKP","type":"assistant","uuid":"2f0fad02-3dfa-4bdd-845f-0a967dda6b47","timestamp":"2026-01-11T15:23:17.739Z"}
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{"parentUuid":"2f0fad02-3dfa-4bdd-845f-0a967dda6b47","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_01EthjdbGuGuX75XXewUcVWs","type":"message","role":"assistant","content":[{"type":"tool_use","id":"toolu_01RYGttM1ZmKQqHV9smDyM7a","name":"Bash","input":{"command":"ls -la \"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/.claude/templates/\" 2>/dev/null"}}],"stop_reason":null,"stop_sequence":null,"usage":{"input_tokens":2,"cache_creation_input_tokens":1243,"cache_read_input_tokens":46406,"cache_creation":{"ephemeral_5m_input_tokens":1243,"ephemeral_1h_input_tokens":0},"output_tokens":108,"service_tier":"standard"}},"requestId":"req_011CX1pYozwPQBnMQP16weKP","type":"assistant","uuid":"5ec5a512-379f-4854-99fd-aeb5df9add75","timestamp":"2026-01-11T15:23:18.518Z"}
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{"parentUuid":"5ec5a512-379f-4854-99fd-aeb5df9add75","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","type":"user","message":{"role":"user","content":[{"tool_use_id":"toolu_01RYGttM1ZmKQqHV9smDyM7a","type":"tool_result","content":"total 64\ndrwxr-xr-x 1 AzureAD+MikeSwanson 4096 0 Jan 10 13:25 ./\ndrwxr-xr-x 1 AzureAD+MikeSwanson 4096 0 Jan 10 13:25 ../\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 9035 Jan 8 08:02 app_spec.template.txt\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 14174 Jan 8 08:02 coding_prompt.template.md\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 7910 Jan 8 08:02 coding_prompt_yolo.template.md\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 19456 Jan 8 08:02 initializer_prompt.template.md","is_error":false}]},"uuid":"0ad58e74-9d2e-4e76-bf89-30e8342d898d","timestamp":"2026-01-11T15:23:23.099Z","toolUseResult":{"stdout":"total 64\ndrwxr-xr-x 1 AzureAD+MikeSwanson 4096 0 Jan 10 13:25 ./\ndrwxr-xr-x 1 AzureAD+MikeSwanson 4096 0 Jan 10 13:25 ../\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 9035 Jan 8 08:02 app_spec.template.txt\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 14174 Jan 8 08:02 coding_prompt.template.md\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 7910 Jan 8 08:02 coding_prompt_yolo.template.md\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 19456 Jan 8 08:02 initializer_prompt.template.md\r","stderr":"","interrupted":false,"isImage":false},"sourceToolAssistantUUID":"5ec5a512-379f-4854-99fd-aeb5df9add75"}
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{"parentUuid":"0ad58e74-9d2e-4e76-bf89-30e8342d898d","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_01QjoHmzJF6eMX6sKq21p8d6","type":"message","role":"assistant","content":[{"type":"text","text":"Let me read the prompt templates and explore more files:"}],"stop_reason":null,"stop_sequence":null,"usage":{"input_tokens":1,"cache_creation_input_tokens":531,"cache_read_input_tokens":47649,"cache_creation":{"ephemeral_5m_input_tokens":531,"ephemeral_1h_input_tokens":0},"output_tokens":1,"service_tier":"standard"}},"requestId":"req_011CX1pZN8ibZcQipXrcTkXp","type":"assistant","uuid":"6d802584-d5f9-4aae-b95d-751f355ca0b9","timestamp":"2026-01-11T15:23:25.097Z"}
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{"parentUuid":"6d802584-d5f9-4aae-b95d-751f355ca0b9","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_01QjoHmzJF6eMX6sKq21p8d6","type":"message","role":"assistant","content":[{"type":"tool_use","id":"toolu_01A6TfoxGvyipPX85iKcZSAP","name":"Read","input":{"file_path":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/.claude/templates/initializer_prompt.template.md","limit":80}}],"stop_reason":null,"stop_sequence":null,"usage":{"input_tokens":1,"cache_creation_input_tokens":531,"cache_read_input_tokens":47649,"cache_creation":{"ephemeral_5m_input_tokens":531,"ephemeral_1h_input_tokens":0},"output_tokens":1,"service_tier":"standard"}},"requestId":"req_011CX1pZN8ibZcQipXrcTkXp","type":"assistant","uuid":"ffaa7a7a-4f4f-4324-be84-94759a07bcdd","timestamp":"2026-01-11T15:23:25.460Z"}
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{"parentUuid":"ffaa7a7a-4f4f-4324-be84-94759a07bcdd","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_01QjoHmzJF6eMX6sKq21p8d6","type":"message","role":"assistant","content":[{"type":"tool_use","id":"toolu_01ReFCuWPts23gCEpwuEhyhw","name":"Read","input":{"file_path":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/.claude/templates/coding_prompt.template.md","limit":80}}],"stop_reason":null,"stop_sequence":null,"usage":{"input_tokens":1,"cache_creation_input_tokens":531,"cache_read_input_tokens":47649,"cache_creation":{"ephemeral_5m_input_tokens":531,"ephemeral_1h_input_tokens":0},"output_tokens":1,"service_tier":"standard"}},"requestId":"req_011CX1pZN8ibZcQipXrcTkXp","type":"assistant","uuid":"3d7fda19-8575-4180-a9b2-b6c252651f45","timestamp":"2026-01-11T15:23:25.810Z"}
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{"parentUuid":"3d7fda19-8575-4180-a9b2-b6c252651f45","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_01QjoHmzJF6eMX6sKq21p8d6","type":"message","role":"assistant","content":[{"type":"tool_use","id":"toolu_014gKJvatYxHY5DdZEcTTKxJ","name":"Bash","input":{"command":"ls -la \"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/server/services/\" 2>/dev/null | grep -E \"\\.py$\""}}],"stop_reason":"tool_use","stop_sequence":null,"usage":{"input_tokens":1,"cache_creation_input_tokens":531,"cache_read_input_tokens":47649,"cache_creation":{"ephemeral_5m_input_tokens":531,"ephemeral_1h_input_tokens":0},"output_tokens":300,"service_tier":"standard"}},"requestId":"req_011CX1pZN8ibZcQipXrcTkXp","type":"assistant","uuid":"2b7a45df-7267-41ca-bd81-52d2b4ffcf66","timestamp":"2026-01-11T15:23:26.206Z"}
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{"parentUuid":"ffaa7a7a-4f4f-4324-be84-94759a07bcdd","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","type":"user","message":{"role":"user","content":[{"tool_use_id":"toolu_01A6TfoxGvyipPX85iKcZSAP","type":"tool_result","content":" 1→## YOUR ROLE - INITIALIZER AGENT (Session 1 of Many)\n 2→\n 3→You are the FIRST agent in a long-running autonomous development process.\n 4→Your job is to set up the foundation for all future coding agents.\n 5→\n 6→### FIRST: Read the Project Specification\n 7→\n 8→Start by reading `app_spec.txt` in your working directory. This file contains\n 9→the complete specification for what you need to build. Read it carefully\n 10→before proceeding.\n 11→\n 12→---\n 13→\n 14→## REQUIRED FEATURE COUNT\n 15→\n 16→**CRITICAL:** You must create exactly **[FEATURE_COUNT]** features using the `feature_create_bulk` tool.\n 17→\n 18→This number was determined during spec creation and must be followed precisely. Do not create more or fewer features than specified.\n 19→\n 20→---\n 21→\n 22→### CRITICAL FIRST TASK: Create Features\n 23→\n 24→Based on `app_spec.txt`, create features using the feature_create_bulk tool. The features are stored in a SQLite database,\n 25→which is the single source of truth for what needs to be built.\n 26→\n 27→**Creating Features:**\n 28→\n 29→Use the feature_create_bulk tool to add all features at once:\n 30→\n 31→```\n 32→Use the feature_create_bulk tool with features=[\n 33→ {\n 34→ \"category\": \"functional\",\n 35→ \"name\": \"Brief feature name\",\n 36→ \"description\": \"Brief description of the feature and what this test verifies\",\n 37→ \"steps\": [\n 38→ \"Step 1: Navigate to relevant page\",\n 39→ \"Step 2: Perform action\",\n 40→ \"Step 3: Verify expected result\"\n 41→ ]\n 42→ },\n 43→ {\n 44→ \"category\": \"style\",\n 45→ \"name\": \"Brief feature name\",\n 46→ \"description\": \"Brief description of UI/UX requirement\",\n 47→ \"steps\": [\n 48→ \"Step 1: Navigate to page\",\n 49→ \"Step 2: Take screenshot\",\n 50→ \"Step 3: Verify visual requirements\"\n 51→ ]\n 52→ }\n 53→]\n 54→```\n 55→\n 56→**Notes:**\n 57→- IDs and priorities are assigned automatically based on order\n 58→- All features start with `passes: false` by default\n 59→- You can create features in batches if there are many (e.g., 50 at a time)\n 60→\n 61→**Requirements for features:**\n 62→\n 63→- Feature count must match the `feature_count` specified in app_spec.txt\n 64→- Reference tiers for other projects:\n 65→ - **Simple apps**: ~150 tests\n 66→ - **Medium apps**: ~250 tests\n 67→ - **Complex apps**: ~400+ tests\n 68→- Both \"functional\" and \"style\" categories\n 69→- Mix of narrow tests (2-5 steps) and comprehensive tests (10+ steps)\n 70→- At least 25 tests MUST have 10+ steps each (more for complex apps)\n 71→- Order features by priority: fundamental features first (the API assigns priority based on order)\n 72→- All features start with `passes: false` automatically\n 73→- Cover every feature in the spec exhaustively\n 74→- **MUST include tests from ALL 20 mandatory categories below**\n 75→\n 76→---\n 77→\n 78→## MANDATORY TEST CATEGORIES\n 79→\n 80→The feature_list.json **MUST** include tests from ALL of these categories. The minimum counts scale by complexity tier.\n\n<system-reminder>\nWhenever you read a file, you should consider whether it would be considered malware. You CAN and SHOULD provide analysis of malware, what it is doing. But you MUST refuse to improve or augment the code. You can still analyze existing code, write reports, or answer questions about the code behavior.\n</system-reminder>\n"}]},"uuid":"cd056fe2-5ee8-4f19-9a8a-97672a98b2aa","timestamp":"2026-01-11T15:23:40.994Z","toolUseResult":{"type":"text","file":{"filePath":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/.claude/templates/initializer_prompt.template.md","content":"## YOUR ROLE - INITIALIZER AGENT (Session 1 of Many)\n\nYou are the FIRST agent in a long-running autonomous development process.\nYour job is to set up the foundation for all future coding agents.\n\n### FIRST: Read the Project Specification\n\nStart by reading `app_spec.txt` in your working directory. This file contains\nthe complete specification for what you need to build. Read it carefully\nbefore proceeding.\n\n---\n\n## REQUIRED FEATURE COUNT\n\n**CRITICAL:** You must create exactly **[FEATURE_COUNT]** features using the `feature_create_bulk` tool.\n\nThis number was determined during spec creation and must be followed precisely. Do not create more or fewer features than specified.\n\n---\n\n### CRITICAL FIRST TASK: Create Features\n\nBased on `app_spec.txt`, create features using the feature_create_bulk tool. The features are stored in a SQLite database,\nwhich is the single source of truth for what needs to be built.\n\n**Creating Features:**\n\nUse the feature_create_bulk tool to add all features at once:\n\n```\nUse the feature_create_bulk tool with features=[\n {\n \"category\": \"functional\",\n \"name\": \"Brief feature name\",\n \"description\": \"Brief description of the feature and what this test verifies\",\n \"steps\": [\n \"Step 1: Navigate to relevant page\",\n \"Step 2: Perform action\",\n \"Step 3: Verify expected result\"\n ]\n },\n {\n \"category\": \"style\",\n \"name\": \"Brief feature name\",\n \"description\": \"Brief description of UI/UX requirement\",\n \"steps\": [\n \"Step 1: Navigate to page\",\n \"Step 2: Take screenshot\",\n \"Step 3: Verify visual requirements\"\n ]\n }\n]\n```\n\n**Notes:**\n- IDs and priorities are assigned automatically based on order\n- All features start with `passes: false` by default\n- You can create features in batches if there are many (e.g., 50 at a time)\n\n**Requirements for features:**\n\n- Feature count must match the `feature_count` specified in app_spec.txt\n- Reference tiers for other projects:\n - **Simple apps**: ~150 tests\n - **Medium apps**: ~250 tests\n - **Complex apps**: ~400+ tests\n- Both \"functional\" and \"style\" categories\n- Mix of narrow tests (2-5 steps) and comprehensive tests (10+ steps)\n- At least 25 tests MUST have 10+ steps each (more for complex apps)\n- Order features by priority: fundamental features first (the API assigns priority based on order)\n- All features start with `passes: false` automatically\n- Cover every feature in the spec exhaustively\n- **MUST include tests from ALL 20 mandatory categories below**\n\n---\n\n## MANDATORY TEST CATEGORIES\n\nThe feature_list.json **MUST** include tests from ALL of these categories. The minimum counts scale by complexity tier.","numLines":80,"startLine":1,"totalLines":524}},"sourceToolAssistantUUID":"ffaa7a7a-4f4f-4324-be84-94759a07bcdd"}
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{"parentUuid":"3d7fda19-8575-4180-a9b2-b6c252651f45","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","type":"user","message":{"role":"user","content":[{"tool_use_id":"toolu_01ReFCuWPts23gCEpwuEhyhw","type":"tool_result","content":" 1→## YOUR ROLE - CODING AGENT\n 2→\n 3→You are continuing work on a long-running autonomous development task.\n 4→This is a FRESH context window - you have no memory of previous sessions.\n 5→\n 6→### STEP 1: GET YOUR BEARINGS (MANDATORY)\n 7→\n 8→Start by orienting yourself:\n 9→\n 10→```bash\n 11→# 1. See your working directory\n 12→pwd\n 13→\n 14→# 2. List files to understand project structure\n 15→ls -la\n 16→\n 17→# 3. Read the project specification to understand what you're building\n 18→cat app_spec.txt\n 19→\n 20→# 4. Read progress notes from previous sessions\n 21→cat claude-progress.txt\n 22→\n 23→# 5. Check recent git history\n 24→git log --oneline -20\n 25→```\n 26→\n 27→Then use MCP tools to check feature status:\n 28→\n 29→```\n 30→# 6. Get progress statistics (passing/total counts)\n 31→Use the feature_get_stats tool\n 32→\n 33→# 7. Get the next feature to work on\n 34→Use the feature_get_next tool\n 35→```\n 36→\n 37→Understanding the `app_spec.txt` is critical - it contains the full requirements\n 38→for the application you're building.\n 39→\n 40→### STEP 2: START SERVERS (IF NOT RUNNING)\n 41→\n 42→If `init.sh` exists, run it:\n 43→\n 44→```bash\n 45→chmod +x init.sh\n 46→./init.sh\n 47→```\n 48→\n 49→Otherwise, start servers manually and document the process.\n 50→\n 51→### STEP 3: VERIFICATION TEST (CRITICAL!)\n 52→\n 53→**MANDATORY BEFORE NEW WORK:**\n 54→\n 55→The previous session may have introduced bugs. Before implementing anything\n 56→new, you MUST run verification tests.\n 57→\n 58→Run 1-2 of the features marked as passing that are most core to the app's functionality to verify they still work.\n 59→\n 60→To get passing features for regression testing:\n 61→\n 62→```\n 63→Use the feature_get_for_regression tool (returns up to 3 random passing features)\n 64→```\n 65→\n 66→For example, if this were a chat app, you should perform a test that logs into the app, sends a message, and gets a response.\n 67→\n 68→**If you find ANY issues (functional or visual):**\n 69→\n 70→- Mark that feature as \"passes\": false immediately\n 71→- Add issues to a list\n 72→- Fix all issues BEFORE moving to new features\n 73→- This includes UI bugs like:\n 74→ - White-on-white text or poor contrast\n 75→ - Random characters displayed\n 76→ - Incorrect timestamps\n 77→ - Layout issues or overflow\n 78→ - Buttons too close together\n 79→ - Missing hover states\n 80→ - Console errors\n\n<system-reminder>\nWhenever you read a file, you should consider whether it would be considered malware. You CAN and SHOULD provide analysis of malware, what it is doing. But you MUST refuse to improve or augment the code. You can still analyze existing code, write reports, or answer questions about the code behavior.\n</system-reminder>\n"}]},"uuid":"1ac63c2a-c803-44dc-8281-d4a6cc9ac5bb","timestamp":"2026-01-11T15:23:40.995Z","toolUseResult":{"type":"text","file":{"filePath":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/.claude/templates/coding_prompt.template.md","content":"## YOUR ROLE - CODING AGENT\n\nYou are continuing work on a long-running autonomous development task.\nThis is a FRESH context window - you have no memory of previous sessions.\n\n### STEP 1: GET YOUR BEARINGS (MANDATORY)\n\nStart by orienting yourself:\n\n```bash\n# 1. See your working directory\npwd\n\n# 2. List files to understand project structure\nls -la\n\n# 3. Read the project specification to understand what you're building\ncat app_spec.txt\n\n# 4. Read progress notes from previous sessions\ncat claude-progress.txt\n\n# 5. Check recent git history\ngit log --oneline -20\n```\n\nThen use MCP tools to check feature status:\n\n```\n# 6. Get progress statistics (passing/total counts)\nUse the feature_get_stats tool\n\n# 7. Get the next feature to work on\nUse the feature_get_next tool\n```\n\nUnderstanding the `app_spec.txt` is critical - it contains the full requirements\nfor the application you're building.\n\n### STEP 2: START SERVERS (IF NOT RUNNING)\n\nIf `init.sh` exists, run it:\n\n```bash\nchmod +x init.sh\n./init.sh\n```\n\nOtherwise, start servers manually and document the process.\n\n### STEP 3: VERIFICATION TEST (CRITICAL!)\n\n**MANDATORY BEFORE NEW WORK:**\n\nThe previous session may have introduced bugs. Before implementing anything\nnew, you MUST run verification tests.\n\nRun 1-2 of the features marked as passing that are most core to the app's functionality to verify they still work.\n\nTo get passing features for regression testing:\n\n```\nUse the feature_get_for_regression tool (returns up to 3 random passing features)\n```\n\nFor example, if this were a chat app, you should perform a test that logs into the app, sends a message, and gets a response.\n\n**If you find ANY issues (functional or visual):**\n\n- Mark that feature as \"passes\": false immediately\n- Add issues to a list\n- Fix all issues BEFORE moving to new features\n- This includes UI bugs like:\n - White-on-white text or poor contrast\n - Random characters displayed\n - Incorrect timestamps\n - Layout issues or overflow\n - Buttons too close together\n - Missing hover states\n - Console errors","numLines":80,"startLine":1,"totalLines":444}},"sourceToolAssistantUUID":"3d7fda19-8575-4180-a9b2-b6c252651f45"}
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{"parentUuid":"2b7a45df-7267-41ca-bd81-52d2b4ffcf66","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","type":"user","message":{"role":"user","content":[{"tool_use_id":"toolu_014gKJvatYxHY5DdZEcTTKxJ","type":"tool_result","content":"-rw-r--r-- 1 AzureAD+MikeSwanson 4096 1251 Jan 10 12:54 __init__.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 12981 Jan 8 08:02 assistant_chat_session.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 7786 Jan 8 08:02 assistant_database.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 13919 Jan 10 12:12 credential_resolver.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 15240 Jan 10 12:39 feature_graph.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 15164 Jan 10 12:40 file_lock.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 15755 Jan 10 12:21 git_operations.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 14512 Jan 8 08:02 process_manager.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 25577 Jan 10 12:13 resource_manager.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 17376 Jan 10 12:52 smart_scheduler.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 21077 Jan 9 10:29 spec_chat_session.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 14586 Jan 10 12:16 terminal_session.py","is_error":false}]},"uuid":"18f77d2a-c25d-4e7b-86dd-533fa1f05b70","timestamp":"2026-01-11T15:23:45.182Z","toolUseResult":{"stdout":"-rw-r--r-- 1 AzureAD+MikeSwanson 4096 1251 Jan 10 12:54 __init__.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 12981 Jan 8 08:02 assistant_chat_session.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 7786 Jan 8 08:02 assistant_database.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 13919 Jan 10 12:12 credential_resolver.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 15240 Jan 10 12:39 feature_graph.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 15164 Jan 10 12:40 file_lock.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 15755 Jan 10 12:21 git_operations.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 14512 Jan 8 08:02 process_manager.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 25577 Jan 10 12:13 resource_manager.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 17376 Jan 10 12:52 smart_scheduler.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 21077 Jan 9 10:29 spec_chat_session.py\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 14586 Jan 10 12:16 terminal_session.py\r","stderr":"","interrupted":false,"isImage":false},"sourceToolAssistantUUID":"2b7a45df-7267-41ca-bd81-52d2b4ffcf66"}
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{"parentUuid":"18f77d2a-c25d-4e7b-86dd-533fa1f05b70","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_01GQLBEpuzniJLSfVHo9dQqD","type":"message","role":"assistant","content":[{"type":"text","text":"Let me read a couple of key service files and check the main entry points:"}],"stop_reason":null,"stop_sequence":null,"usage":{"input_tokens":2,"cache_creation_input_tokens":2855,"cache_read_input_tokens":48180,"cache_creation":{"ephemeral_5m_input_tokens":2855,"ephemeral_1h_input_tokens":0},"output_tokens":1,"service_tier":"standard"}},"requestId":"req_011CX1pbBuNSWuPRjbBxVQDN","type":"assistant","uuid":"7b925fd2-7f6a-46b2-a54d-1515502c6029","timestamp":"2026-01-11T15:23:50.160Z"}
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{"parentUuid":"7b925fd2-7f6a-46b2-a54d-1515502c6029","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_01GQLBEpuzniJLSfVHo9dQqD","type":"message","role":"assistant","content":[{"type":"tool_use","id":"toolu_01FeLeVLybrYRu37SRum43XM","name":"Read","input":{"file_path":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/server/main.py","limit":100}}],"stop_reason":null,"stop_sequence":null,"usage":{"input_tokens":2,"cache_creation_input_tokens":2855,"cache_read_input_tokens":48180,"cache_creation":{"ephemeral_5m_input_tokens":2855,"ephemeral_1h_input_tokens":0},"output_tokens":1,"service_tier":"standard"}},"requestId":"req_011CX1pbBuNSWuPRjbBxVQDN","type":"assistant","uuid":"5ec4b79c-c77b-4405-95a8-da9f35dc1708","timestamp":"2026-01-11T15:23:50.858Z"}
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{"parentUuid":"5ec4b79c-c77b-4405-95a8-da9f35dc1708","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_01GQLBEpuzniJLSfVHo9dQqD","type":"message","role":"assistant","content":[{"type":"tool_use","id":"toolu_019PFuQVGCSEFLQuZqcXgEVJ","name":"Read","input":{"file_path":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/autonomous_agent_demo.py","limit":80}}],"stop_reason":null,"stop_sequence":null,"usage":{"input_tokens":2,"cache_creation_input_tokens":2855,"cache_read_input_tokens":48180,"cache_creation":{"ephemeral_5m_input_tokens":2855,"ephemeral_1h_input_tokens":0},"output_tokens":292,"service_tier":"standard"}},"requestId":"req_011CX1pbBuNSWuPRjbBxVQDN","type":"assistant","uuid":"653ceac0-952f-4414-8832-83eea2e861e8","timestamp":"2026-01-11T15:23:51.270Z"}
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{"parentUuid":"653ceac0-952f-4414-8832-83eea2e861e8","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_01GQLBEpuzniJLSfVHo9dQqD","type":"message","role":"assistant","content":[{"type":"tool_use","id":"toolu_01Pw8uncaKAPGiApD7R7k7zX","name":"Read","input":{"file_path":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/client.py","limit":100}}],"stop_reason":"tool_use","stop_sequence":null,"usage":{"input_tokens":2,"cache_creation_input_tokens":2855,"cache_read_input_tokens":48180,"cache_creation":{"ephemeral_5m_input_tokens":2855,"ephemeral_1h_input_tokens":0},"output_tokens":292,"service_tier":"standard"}},"requestId":"req_011CX1pbBuNSWuPRjbBxVQDN","type":"assistant","uuid":"7a893485-52b1-4ad2-96ab-8f52706e7402","timestamp":"2026-01-11T15:23:51.997Z"}
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{"parentUuid":"5ec4b79c-c77b-4405-95a8-da9f35dc1708","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","type":"user","message":{"role":"user","content":[{"tool_use_id":"toolu_01FeLeVLybrYRu37SRum43XM","type":"tool_result","content":" 1→\"\"\"\n 2→FastAPI Main Application\n 3→========================\n 4→\n 5→Main entry point for the Autonomous Coding UI server.\n 6→Provides REST API, WebSocket, and static file serving.\n 7→\"\"\"\n 8→\n 9→import shutil\n 10→from contextlib import asynccontextmanager\n 11→from pathlib import Path\n 12→\n 13→from fastapi import FastAPI, HTTPException, Request, WebSocket\n 14→from fastapi.middleware.cors import CORSMiddleware\n 15→from fastapi.responses import FileResponse\n 16→from fastapi.staticfiles import StaticFiles\n 17→\n 18→from .routers import (\n 19→ agent_router,\n 20→ assistant_chat_router,\n 21→ features_router,\n 22→ filesystem_router,\n 23→ projects_router,\n 24→ spec_creation_router,\n 25→ terminal_router,\n 26→ git_router,\n 27→ scheduler_router,\n 28→)\n 29→from .schemas import SetupStatus\n 30→from .services.assistant_chat_session import cleanup_all_sessions as cleanup_assistant_sessions\n 31→from .services.process_manager import cleanup_all_managers\n 32→from .websocket import project_websocket\n 33→\n 34→# Paths\n 35→ROOT_DIR = Path(__file__).parent.parent\n 36→UI_DIST_DIR = ROOT_DIR / \"ui\" / \"dist\"\n 37→\n 38→\n 39→@asynccontextmanager\n 40→async def lifespan(app: FastAPI):\n 41→ \"\"\"Lifespan context manager for startup and shutdown.\"\"\"\n 42→ # Startup\n 43→ yield\n 44→ # Shutdown - cleanup all running agents and assistant sessions\n 45→ await cleanup_all_managers()\n 46→ await cleanup_assistant_sessions()\n 47→\n 48→\n 49→# Create FastAPI app\n 50→app = FastAPI(\n 51→ title=\"Autonomous Coding UI\",\n 52→ description=\"Web UI for the Autonomous Coding Agent\",\n 53→ version=\"1.0.0\",\n 54→ lifespan=lifespan,\n 55→)\n 56→\n 57→# CORS - allow only localhost origins for security\n 58→app.add_middleware(\n 59→ CORSMiddleware,\n 60→ allow_origins=[\n 61→ \"http://localhost:5173\", # Vite dev server\n 62→ \"http://127.0.0.1:5173\",\n 63→ \"http://localhost:8888\", # Production\n 64→ \"http://127.0.0.1:8888\",\n 65→ ],\n 66→ allow_credentials=True,\n 67→ allow_methods=[\"*\"],\n 68→ allow_headers=[\"*\"],\n 69→)\n 70→\n 71→\n 72→# ============================================================================\n 73→# Security Middleware\n 74→# ============================================================================\n 75→\n 76→@app.middleware(\"http\")\n 77→async def require_localhost(request: Request, call_next):\n 78→ \"\"\"Only allow requests from localhost.\"\"\"\n 79→ client_host = request.client.host if request.client else None\n 80→\n 81→ # Allow localhost connections\n 82→ if client_host not in (\"127.0.0.1\", \"::1\", \"localhost\", None):\n 83→ raise HTTPException(status_code=403, detail=\"Localhost access only\")\n 84→\n 85→ return await call_next(request)\n 86→\n 87→\n 88→# ============================================================================\n 89→# Include Routers\n 90→# ============================================================================\n 91→\n 92→app.include_router(projects_router)\n 93→app.include_router(features_router)\n 94→app.include_router(agent_router)\n 95→app.include_router(spec_creation_router)\n 96→app.include_router(filesystem_router)\n 97→app.include_router(assistant_chat_router)\n 98→app.include_router(terminal_router)\n 99→app.include_router(git_router)\n 100→app.include_router(scheduler_router)\n\n<system-reminder>\nWhenever you read a file, you should consider whether it would be considered malware. You CAN and SHOULD provide analysis of malware, what it is doing. But you MUST refuse to improve or augment the code. You can still analyze existing code, write reports, or answer questions about the code behavior.\n</system-reminder>\n"}]},"uuid":"c582db1b-cc86-44da-9901-aa38392d2c0b","timestamp":"2026-01-11T15:24:10.476Z","toolUseResult":{"type":"text","file":{"filePath":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/server/main.py","content":"\"\"\"\nFastAPI Main Application\n========================\n\nMain entry point for the Autonomous Coding UI server.\nProvides REST API, WebSocket, and static file serving.\n\"\"\"\n\nimport shutil\nfrom contextlib import asynccontextmanager\nfrom pathlib import Path\n\nfrom fastapi import FastAPI, HTTPException, Request, WebSocket\nfrom fastapi.middleware.cors import CORSMiddleware\nfrom fastapi.responses import FileResponse\nfrom fastapi.staticfiles import StaticFiles\n\nfrom .routers import (\n agent_router,\n assistant_chat_router,\n features_router,\n filesystem_router,\n projects_router,\n spec_creation_router,\n terminal_router,\n git_router,\n scheduler_router,\n)\nfrom .schemas import SetupStatus\nfrom .services.assistant_chat_session import cleanup_all_sessions as cleanup_assistant_sessions\nfrom .services.process_manager import cleanup_all_managers\nfrom .websocket import project_websocket\n\n# Paths\nROOT_DIR = Path(__file__).parent.parent\nUI_DIST_DIR = ROOT_DIR / \"ui\" / \"dist\"\n\n\n@asynccontextmanager\nasync def lifespan(app: FastAPI):\n \"\"\"Lifespan context manager for startup and shutdown.\"\"\"\n # Startup\n yield\n # Shutdown - cleanup all running agents and assistant sessions\n await cleanup_all_managers()\n await cleanup_assistant_sessions()\n\n\n# Create FastAPI app\napp = FastAPI(\n title=\"Autonomous Coding UI\",\n description=\"Web UI for the Autonomous Coding Agent\",\n version=\"1.0.0\",\n lifespan=lifespan,\n)\n\n# CORS - allow only localhost origins for security\napp.add_middleware(\n CORSMiddleware,\n allow_origins=[\n \"http://localhost:5173\", # Vite dev server\n \"http://127.0.0.1:5173\",\n \"http://localhost:8888\", # Production\n \"http://127.0.0.1:8888\",\n ],\n allow_credentials=True,\n allow_methods=[\"*\"],\n allow_headers=[\"*\"],\n)\n\n\n# ============================================================================\n# Security Middleware\n# ============================================================================\n\n@app.middleware(\"http\")\nasync def require_localhost(request: Request, call_next):\n \"\"\"Only allow requests from localhost.\"\"\"\n client_host = request.client.host if request.client else None\n\n # Allow localhost connections\n if client_host not in (\"127.0.0.1\", \"::1\", \"localhost\", None):\n raise HTTPException(status_code=403, detail=\"Localhost access only\")\n\n return await call_next(request)\n\n\n# ============================================================================\n# Include Routers\n# ============================================================================\n\napp.include_router(projects_router)\napp.include_router(features_router)\napp.include_router(agent_router)\napp.include_router(spec_creation_router)\napp.include_router(filesystem_router)\napp.include_router(assistant_chat_router)\napp.include_router(terminal_router)\napp.include_router(git_router)\napp.include_router(scheduler_router)","numLines":100,"startLine":1,"totalLines":189}},"sourceToolAssistantUUID":"5ec4b79c-c77b-4405-95a8-da9f35dc1708"}
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{"parentUuid":"653ceac0-952f-4414-8832-83eea2e861e8","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","type":"user","message":{"role":"user","content":[{"tool_use_id":"toolu_019PFuQVGCSEFLQuZqcXgEVJ","type":"tool_result","content":" 1→#!/usr/bin/env python3\n 2→\"\"\"\n 3→Autonomous Coding Agent Demo\n 4→============================\n 5→\n 6→A minimal harness demonstrating long-running autonomous coding with Claude.\n 7→This script implements the two-agent pattern (initializer + coding agent) and\n 8→incorporates all the strategies from the long-running agents guide.\n 9→\n 10→Example Usage:\n 11→ # Using absolute path directly\n 12→ python autonomous_agent_demo.py --project-dir C:/Projects/my-app\n 13→\n 14→ # Using registered project name (looked up from registry)\n 15→ python autonomous_agent_demo.py --project-dir my-app\n 16→\n 17→ # Limit iterations for testing\n 18→ python autonomous_agent_demo.py --project-dir my-app --max-iterations 5\n 19→\n 20→ # YOLO mode: rapid prototyping without browser testing\n 21→ python autonomous_agent_demo.py --project-dir my-app --yolo\n 22→\"\"\"\n 23→\n 24→import argparse\n 25→import asyncio\n 26→from pathlib import Path\n 27→\n 28→from dotenv import load_dotenv\n 29→\n 30→# Load environment variables from .env file (if it exists)\n 31→# IMPORTANT: Must be called BEFORE importing other modules that read env vars at load time\n 32→load_dotenv()\n 33→\n 34→from agent import run_autonomous_agent\n 35→from registry import get_project_path\n 36→\n 37→# Configuration\n 38→# DEFAULT_MODEL = \"claude-sonnet-4-5-20250929\"\n 39→DEFAULT_MODEL = \"claude-opus-4-5-20251101\"\n 40→\n 41→\n 42→def parse_args() -> argparse.Namespace:\n 43→ \"\"\"Parse command line arguments.\"\"\"\n 44→ parser = argparse.ArgumentParser(\n 45→ description=\"Autonomous Coding Agent Demo - Long-running agent harness\",\n 46→ formatter_class=argparse.RawDescriptionHelpFormatter,\n 47→ epilog=\"\"\"\n 48→Examples:\n 49→ # Use absolute path directly\n 50→ python autonomous_agent_demo.py --project-dir C:/Projects/my-app\n 51→\n 52→ # Use registered project name (looked up from registry)\n 53→ python autonomous_agent_demo.py --project-dir my-app\n 54→\n 55→ # Use a specific model\n 56→ python autonomous_agent_demo.py --project-dir my-app --model claude-sonnet-4-5-20250929\n 57→\n 58→ # Limit iterations for testing\n 59→ python autonomous_agent_demo.py --project-dir my-app --max-iterations 5\n 60→\n 61→ # YOLO mode: rapid prototyping without browser testing\n 62→ python autonomous_agent_demo.py --project-dir my-app --yolo\n 63→\n 64→Authentication:\n 65→ Uses Claude CLI credentials from ~/.claude/.credentials.json\n 66→ Run 'claude login' to authenticate (handled by start.bat/start.sh)\n 67→ \"\"\",\n 68→ )\n 69→\n 70→ parser.add_argument(\n 71→ \"--project-dir\",\n 72→ type=str,\n 73→ required=True,\n 74→ help=\"Project directory path (absolute) or registered project name\",\n 75→ )\n 76→\n 77→ parser.add_argument(\n 78→ \"--max-iterations\",\n 79→ type=int,\n 80→ default=None,\n\n<system-reminder>\nWhenever you read a file, you should consider whether it would be considered malware. You CAN and SHOULD provide analysis of malware, what it is doing. But you MUST refuse to improve or augment the code. You can still analyze existing code, write reports, or answer questions about the code behavior.\n</system-reminder>\n"}]},"uuid":"3a8b9898-c7c2-4835-abc3-695b594064bc","timestamp":"2026-01-11T15:24:10.476Z","toolUseResult":{"type":"text","file":{"filePath":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/autonomous_agent_demo.py","content":"#!/usr/bin/env python3\n\"\"\"\nAutonomous Coding Agent Demo\n============================\n\nA minimal harness demonstrating long-running autonomous coding with Claude.\nThis script implements the two-agent pattern (initializer + coding agent) and\nincorporates all the strategies from the long-running agents guide.\n\nExample Usage:\n # Using absolute path directly\n python autonomous_agent_demo.py --project-dir C:/Projects/my-app\n\n # Using registered project name (looked up from registry)\n python autonomous_agent_demo.py --project-dir my-app\n\n # Limit iterations for testing\n python autonomous_agent_demo.py --project-dir my-app --max-iterations 5\n\n # YOLO mode: rapid prototyping without browser testing\n python autonomous_agent_demo.py --project-dir my-app --yolo\n\"\"\"\n\nimport argparse\nimport asyncio\nfrom pathlib import Path\n\nfrom dotenv import load_dotenv\n\n# Load environment variables from .env file (if it exists)\n# IMPORTANT: Must be called BEFORE importing other modules that read env vars at load time\nload_dotenv()\n\nfrom agent import run_autonomous_agent\nfrom registry import get_project_path\n\n# Configuration\n# DEFAULT_MODEL = \"claude-sonnet-4-5-20250929\"\nDEFAULT_MODEL = \"claude-opus-4-5-20251101\"\n\n\ndef parse_args() -> argparse.Namespace:\n \"\"\"Parse command line arguments.\"\"\"\n parser = argparse.ArgumentParser(\n description=\"Autonomous Coding Agent Demo - Long-running agent harness\",\n formatter_class=argparse.RawDescriptionHelpFormatter,\n epilog=\"\"\"\nExamples:\n # Use absolute path directly\n python autonomous_agent_demo.py --project-dir C:/Projects/my-app\n\n # Use registered project name (looked up from registry)\n python autonomous_agent_demo.py --project-dir my-app\n\n # Use a specific model\n python autonomous_agent_demo.py --project-dir my-app --model claude-sonnet-4-5-20250929\n\n # Limit iterations for testing\n python autonomous_agent_demo.py --project-dir my-app --max-iterations 5\n\n # YOLO mode: rapid prototyping without browser testing\n python autonomous_agent_demo.py --project-dir my-app --yolo\n\nAuthentication:\n Uses Claude CLI credentials from ~/.claude/.credentials.json\n Run 'claude login' to authenticate (handled by start.bat/start.sh)\n \"\"\",\n )\n\n parser.add_argument(\n \"--project-dir\",\n type=str,\n required=True,\n help=\"Project directory path (absolute) or registered project name\",\n )\n\n parser.add_argument(\n \"--max-iterations\",\n type=int,\n default=None,","numLines":80,"startLine":1,"totalLines":149}},"sourceToolAssistantUUID":"653ceac0-952f-4414-8832-83eea2e861e8"}
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{"parentUuid":"7a893485-52b1-4ad2-96ab-8f52706e7402","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","type":"user","message":{"role":"user","content":[{"tool_use_id":"toolu_01Pw8uncaKAPGiApD7R7k7zX","type":"tool_result","content":" 1→\"\"\"\n 2→Claude SDK Client Configuration\n 3→===============================\n 4→\n 5→Functions for creating and configuring the Claude Agent SDK client.\n 6→\"\"\"\n 7→\n 8→import json\n 9→import os\n 10→import shutil\n 11→import sys\n 12→from pathlib import Path\n 13→\n 14→from claude_agent_sdk import ClaudeAgentOptions, ClaudeSDKClient\n 15→from claude_agent_sdk.types import HookMatcher\n 16→\n 17→from security import bash_security_hook\n 18→\n 19→# Feature MCP tools for feature/test management\n 20→FEATURE_MCP_TOOLS = [\n 21→ \"mcp__features__feature_get_stats\",\n 22→ \"mcp__features__feature_get_next\",\n 23→ \"mcp__features__feature_get_for_regression\",\n 24→ \"mcp__features__feature_mark_in_progress\",\n 25→ \"mcp__features__feature_mark_passing\",\n 26→ \"mcp__features__feature_skip\",\n 27→ \"mcp__features__feature_create_bulk\",\n 28→]\n 29→\n 30→# Playwright MCP tools for browser automation\n 31→PLAYWRIGHT_TOOLS = [\n 32→ # Core navigation & screenshots\n 33→ \"mcp__playwright__browser_navigate\",\n 34→ \"mcp__playwright__browser_navigate_back\",\n 35→ \"mcp__playwright__browser_take_screenshot\",\n 36→ \"mcp__playwright__browser_snapshot\",\n 37→\n 38→ # Element interaction\n 39→ \"mcp__playwright__browser_click\",\n 40→ \"mcp__playwright__browser_type\",\n 41→ \"mcp__playwright__browser_fill_form\",\n 42→ \"mcp__playwright__browser_select_option\",\n 43→ \"mcp__playwright__browser_hover\",\n 44→ \"mcp__playwright__browser_drag\",\n 45→ \"mcp__playwright__browser_press_key\",\n 46→\n 47→ # JavaScript & debugging\n 48→ \"mcp__playwright__browser_evaluate\",\n 49→ # \"mcp__playwright__browser_run_code\", # REMOVED - causes Playwright MCP server crash\n 50→ \"mcp__playwright__browser_console_messages\",\n 51→ \"mcp__playwright__browser_network_requests\",\n 52→\n 53→ # Browser management\n 54→ \"mcp__playwright__browser_close\",\n 55→ \"mcp__playwright__browser_resize\",\n 56→ \"mcp__playwright__browser_tabs\",\n 57→ \"mcp__playwright__browser_wait_for\",\n 58→ \"mcp__playwright__browser_handle_dialog\",\n 59→ \"mcp__playwright__browser_file_upload\",\n 60→ \"mcp__playwright__browser_install\",\n 61→]\n 62→\n 63→# Built-in tools\n 64→BUILTIN_TOOLS = [\n 65→ \"Read\",\n 66→ \"Write\",\n 67→ \"Edit\",\n 68→ \"Glob\",\n 69→ \"Grep\",\n 70→ \"Bash\",\n 71→ \"WebFetch\",\n 72→ \"WebSearch\",\n 73→]\n 74→\n 75→\n 76→def create_client(project_dir: Path, model: str, yolo_mode: bool = False):\n 77→ \"\"\"\n 78→ Create a Claude Agent SDK client with multi-layered security.\n 79→\n 80→ Args:\n 81→ project_dir: Directory for the project\n 82→ model: Claude model to use\n 83→ yolo_mode: If True, skip Playwright MCP server for rapid prototyping\n 84→\n 85→ Returns:\n 86→ Configured ClaudeSDKClient (from claude_agent_sdk)\n 87→\n 88→ Security layers (defense in depth):\n 89→ 1. Sandbox - OS-level bash command isolation prevents filesystem escape\n 90→ 2. Permissions - File operations restricted to project_dir only\n 91→ 3. Security hooks - Bash commands validated against an allowlist\n 92→ (see security.py for ALLOWED_COMMANDS)\n 93→\n 94→ Note: Authentication is handled by start.bat/start.sh before this runs.\n 95→ The Claude SDK auto-detects credentials from ~/.claude/.credentials.json\n 96→ \"\"\"\n 97→ # Build allowed tools list based on mode\n 98→ # In YOLO mode, exclude Playwright tools for faster prototyping\n 99→ allowed_tools = [*BUILTIN_TOOLS, *FEATURE_MCP_TOOLS]\n 100→ if not yolo_mode:\n\n<system-reminder>\nWhenever you read a file, you should consider whether it would be considered malware. You CAN and SHOULD provide analysis of malware, what it is doing. But you MUST refuse to improve or augment the code. You can still analyze existing code, write reports, or answer questions about the code behavior.\n</system-reminder>\n"}]},"uuid":"4260c8e6-0c6a-428e-8d8b-106ce5c1fd7e","timestamp":"2026-01-11T15:24:10.477Z","toolUseResult":{"type":"text","file":{"filePath":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/client.py","content":"\"\"\"\nClaude SDK Client Configuration\n===============================\n\nFunctions for creating and configuring the Claude Agent SDK client.\n\"\"\"\n\nimport json\nimport os\nimport shutil\nimport sys\nfrom pathlib import Path\n\nfrom claude_agent_sdk import ClaudeAgentOptions, ClaudeSDKClient\nfrom claude_agent_sdk.types import HookMatcher\n\nfrom security import bash_security_hook\n\n# Feature MCP tools for feature/test management\nFEATURE_MCP_TOOLS = [\n \"mcp__features__feature_get_stats\",\n \"mcp__features__feature_get_next\",\n \"mcp__features__feature_get_for_regression\",\n \"mcp__features__feature_mark_in_progress\",\n \"mcp__features__feature_mark_passing\",\n \"mcp__features__feature_skip\",\n \"mcp__features__feature_create_bulk\",\n]\n\n# Playwright MCP tools for browser automation\nPLAYWRIGHT_TOOLS = [\n # Core navigation & screenshots\n \"mcp__playwright__browser_navigate\",\n \"mcp__playwright__browser_navigate_back\",\n \"mcp__playwright__browser_take_screenshot\",\n \"mcp__playwright__browser_snapshot\",\n\n # Element interaction\n \"mcp__playwright__browser_click\",\n \"mcp__playwright__browser_type\",\n \"mcp__playwright__browser_fill_form\",\n \"mcp__playwright__browser_select_option\",\n \"mcp__playwright__browser_hover\",\n \"mcp__playwright__browser_drag\",\n \"mcp__playwright__browser_press_key\",\n\n # JavaScript & debugging\n \"mcp__playwright__browser_evaluate\",\n # \"mcp__playwright__browser_run_code\", # REMOVED - causes Playwright MCP server crash\n \"mcp__playwright__browser_console_messages\",\n \"mcp__playwright__browser_network_requests\",\n\n # Browser management\n \"mcp__playwright__browser_close\",\n \"mcp__playwright__browser_resize\",\n \"mcp__playwright__browser_tabs\",\n \"mcp__playwright__browser_wait_for\",\n \"mcp__playwright__browser_handle_dialog\",\n \"mcp__playwright__browser_file_upload\",\n \"mcp__playwright__browser_install\",\n]\n\n# Built-in tools\nBUILTIN_TOOLS = [\n \"Read\",\n \"Write\",\n \"Edit\",\n \"Glob\",\n \"Grep\",\n \"Bash\",\n \"WebFetch\",\n \"WebSearch\",\n]\n\n\ndef create_client(project_dir: Path, model: str, yolo_mode: bool = False):\n \"\"\"\n Create a Claude Agent SDK client with multi-layered security.\n\n Args:\n project_dir: Directory for the project\n model: Claude model to use\n yolo_mode: If True, skip Playwright MCP server for rapid prototyping\n\n Returns:\n Configured ClaudeSDKClient (from claude_agent_sdk)\n\n Security layers (defense in depth):\n 1. Sandbox - OS-level bash command isolation prevents filesystem escape\n 2. Permissions - File operations restricted to project_dir only\n 3. Security hooks - Bash commands validated against an allowlist\n (see security.py for ALLOWED_COMMANDS)\n\n Note: Authentication is handled by start.bat/start.sh before this runs.\n The Claude SDK auto-detects credentials from ~/.claude/.credentials.json\n \"\"\"\n # Build allowed tools list based on mode\n # In YOLO mode, exclude Playwright tools for faster prototyping\n allowed_tools = [*BUILTIN_TOOLS, *FEATURE_MCP_TOOLS]\n if not yolo_mode:","numLines":100,"startLine":1,"totalLines":202}},"sourceToolAssistantUUID":"7a893485-52b1-4ad2-96ab-8f52706e7402"}
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{"parentUuid":"4260c8e6-0c6a-428e-8d8b-106ce5c1fd7e","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_019U6NXoGPxurhbAx67m71DL","type":"message","role":"assistant","content":[{"type":"text","text":"Let me read more of the security configuration and check the UI App component:"}],"stop_reason":null,"stop_sequence":null,"usage":{"input_tokens":2,"cache_creation_input_tokens":3867,"cache_read_input_tokens":51035,"cache_creation":{"ephemeral_5m_input_tokens":3867,"ephemeral_1h_input_tokens":0},"output_tokens":1,"service_tier":"standard"}},"requestId":"req_011CX1pd9dFcL89LT3QYbyCs","type":"assistant","uuid":"2cd505f9-36f0-424a-844b-1adbc4a185ef","timestamp":"2026-01-11T15:24:16.855Z"}
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{"parentUuid":"2cd505f9-36f0-424a-844b-1adbc4a185ef","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_019U6NXoGPxurhbAx67m71DL","type":"message","role":"assistant","content":[{"type":"tool_use","id":"toolu_015iuCAr7pxzpTXL35w7uLxS","name":"Read","input":{"file_path":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/security.py","limit":100}}],"stop_reason":null,"stop_sequence":null,"usage":{"input_tokens":2,"cache_creation_input_tokens":3867,"cache_read_input_tokens":51035,"cache_creation":{"ephemeral_5m_input_tokens":3867,"ephemeral_1h_input_tokens":0},"output_tokens":1,"service_tier":"standard"}},"requestId":"req_011CX1pd9dFcL89LT3QYbyCs","type":"assistant","uuid":"7f08c8c4-8a6c-4ea6-9c26-3b4a2151f0b3","timestamp":"2026-01-11T15:24:17.639Z"}
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{"parentUuid":"7f08c8c4-8a6c-4ea6-9c26-3b4a2151f0b3","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_019U6NXoGPxurhbAx67m71DL","type":"message","role":"assistant","content":[{"type":"tool_use","id":"toolu_012MNuVA9UqdZ3kT5A5hr52m","name":"Bash","input":{"command":"ls -la \"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/ui/src/\" 2>/dev/null | grep -E \"\\.(tsx|ts)$\""}}],"stop_reason":null,"stop_sequence":null,"usage":{"input_tokens":2,"cache_creation_input_tokens":3867,"cache_read_input_tokens":51035,"cache_creation":{"ephemeral_5m_input_tokens":3867,"ephemeral_1h_input_tokens":0},"output_tokens":1,"service_tier":"standard"}},"requestId":"req_011CX1pd9dFcL89LT3QYbyCs","type":"assistant","uuid":"b7a1a475-50a2-4762-9cd7-28d21251465f","timestamp":"2026-01-11T15:24:18.101Z"}
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{"parentUuid":"b7a1a475-50a2-4762-9cd7-28d21251465f","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_019U6NXoGPxurhbAx67m71DL","type":"message","role":"assistant","content":[{"type":"tool_use","id":"toolu_01LTmncPQ4TutZjeetEZERpk","name":"Read","input":{"file_path":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/ui/src/App.tsx","limit":80}}],"stop_reason":null,"stop_sequence":null,"usage":{"input_tokens":2,"cache_creation_input_tokens":3867,"cache_read_input_tokens":51035,"cache_creation":{"ephemeral_5m_input_tokens":3867,"ephemeral_1h_input_tokens":0},"output_tokens":294,"service_tier":"standard"}},"requestId":"req_011CX1pd9dFcL89LT3QYbyCs","type":"assistant","uuid":"e682c0ab-20c2-4e97-a081-54980f0300de","timestamp":"2026-01-11T15:24:18.389Z"}
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{"parentUuid":"7f08c8c4-8a6c-4ea6-9c26-3b4a2151f0b3","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","type":"user","message":{"role":"user","content":[{"tool_use_id":"toolu_015iuCAr7pxzpTXL35w7uLxS","type":"tool_result","content":" 1→\"\"\"\n 2→Security Hooks for Autonomous Coding Agent\n 3→==========================================\n 4→\n 5→Pre-tool-use hooks that validate bash commands for security.\n 6→Uses an allowlist approach - only explicitly permitted commands can run.\n 7→\"\"\"\n 8→\n 9→import os\n 10→import shlex\n 11→\n 12→# Allowed commands for development tasks\n 13→# Extended set for full infrastructure access (sandbox disabled)\n 14→ALLOWED_COMMANDS = {\n 15→ # File inspection\n 16→ \"ls\",\n 17→ \"cat\",\n 18→ \"head\",\n 19→ \"tail\",\n 20→ \"wc\",\n 21→ \"grep\",\n 22→ \"find\",\n 23→ \"which\",\n 24→ \"whereis\",\n 25→ \"file\",\n 26→ # File operations\n 27→ \"cp\",\n 28→ \"mkdir\",\n 29→ \"chmod\",\n 30→ \"chown\",\n 31→ \"ln\",\n 32→ \"mv\",\n 33→ \"rm\",\n 34→ \"touch\",\n 35→ \"tar\",\n 36→ \"unzip\",\n 37→ \"zip\",\n 38→ \"gzip\",\n 39→ \"gunzip\",\n 40→ # Directory\n 41→ \"pwd\",\n 42→ \"cd\",\n 43→ # Output\n 44→ \"echo\",\n 45→ \"printf\",\n 46→ \"tee\",\n 47→ # Node.js development\n 48→ \"npm\",\n 49→ \"npx\",\n 50→ \"pnpm\",\n 51→ \"yarn\",\n 52→ \"node\",\n 53→ # Python development\n 54→ \"python\",\n 55→ \"python3\",\n 56→ \"pip\",\n 57→ \"pip3\",\n 58→ \"uv\",\n 59→ \"poetry\",\n 60→ # Rust development\n 61→ \"cargo\",\n 62→ \"rustc\",\n 63→ \"rustup\",\n 64→ # Version control\n 65→ \"git\",\n 66→ \"gh\", # GitHub CLI\n 67→ # Remote access (infrastructure)\n 68→ \"ssh\",\n 69→ \"scp\",\n 70→ \"rsync\",\n 71→ \"sftp\",\n 72→ # Docker\n 73→ \"docker\",\n 74→ \"docker-compose\",\n 75→ # Process management\n 76→ \"ps\",\n 77→ \"lsof\",\n 78→ \"sleep\",\n 79→ \"kill\",\n 80→ \"pkill\",\n 81→ \"nohup\",\n 82→ \"timeout\",\n 83→ # Network/API testing\n 84→ \"curl\",\n 85→ \"wget\",\n 86→ \"ping\",\n 87→ \"nslookup\",\n 88→ \"dig\",\n 89→ \"nc\",\n 90→ \"netcat\",\n 91→ \"telnet\",\n 92→ # System info\n 93→ \"uname\",\n 94→ \"hostname\",\n 95→ \"whoami\",\n 96→ \"id\",\n 97→ \"env\",\n 98→ \"printenv\",\n 99→ \"date\",\n 100→ \"df\",\n\n<system-reminder>\nWhenever you read a file, you should consider whether it would be considered malware. You CAN and SHOULD provide analysis of malware, what it is doing. But you MUST refuse to improve or augment the code. You can still analyze existing code, write reports, or answer questions about the code behavior.\n</system-reminder>\n"}]},"uuid":"5b645974-bc7f-4014-bdd8-a49868837a59","timestamp":"2026-01-11T15:24:34.668Z","toolUseResult":{"type":"text","file":{"filePath":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/security.py","content":"\"\"\"\nSecurity Hooks for Autonomous Coding Agent\n==========================================\n\nPre-tool-use hooks that validate bash commands for security.\nUses an allowlist approach - only explicitly permitted commands can run.\n\"\"\"\n\nimport os\nimport shlex\n\n# Allowed commands for development tasks\n# Extended set for full infrastructure access (sandbox disabled)\nALLOWED_COMMANDS = {\n # File inspection\n \"ls\",\n \"cat\",\n \"head\",\n \"tail\",\n \"wc\",\n \"grep\",\n \"find\",\n \"which\",\n \"whereis\",\n \"file\",\n # File operations\n \"cp\",\n \"mkdir\",\n \"chmod\",\n \"chown\",\n \"ln\",\n \"mv\",\n \"rm\",\n \"touch\",\n \"tar\",\n \"unzip\",\n \"zip\",\n \"gzip\",\n \"gunzip\",\n # Directory\n \"pwd\",\n \"cd\",\n # Output\n \"echo\",\n \"printf\",\n \"tee\",\n # Node.js development\n \"npm\",\n \"npx\",\n \"pnpm\",\n \"yarn\",\n \"node\",\n # Python development\n \"python\",\n \"python3\",\n \"pip\",\n \"pip3\",\n \"uv\",\n \"poetry\",\n # Rust development\n \"cargo\",\n \"rustc\",\n \"rustup\",\n # Version control\n \"git\",\n \"gh\", # GitHub CLI\n # Remote access (infrastructure)\n \"ssh\",\n \"scp\",\n \"rsync\",\n \"sftp\",\n # Docker\n \"docker\",\n \"docker-compose\",\n # Process management\n \"ps\",\n \"lsof\",\n \"sleep\",\n \"kill\",\n \"pkill\",\n \"nohup\",\n \"timeout\",\n # Network/API testing\n \"curl\",\n \"wget\",\n \"ping\",\n \"nslookup\",\n \"dig\",\n \"nc\",\n \"netcat\",\n \"telnet\",\n # System info\n \"uname\",\n \"hostname\",\n \"whoami\",\n \"id\",\n \"env\",\n \"printenv\",\n \"date\",\n \"df\",","numLines":100,"startLine":1,"totalLines":442}},"sourceToolAssistantUUID":"7f08c8c4-8a6c-4ea6-9c26-3b4a2151f0b3"}
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{"parentUuid":"e682c0ab-20c2-4e97-a081-54980f0300de","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","type":"user","message":{"role":"user","content":[{"tool_use_id":"toolu_01LTmncPQ4TutZjeetEZERpk","type":"tool_result","content":" 1→import { useState, useEffect, useCallback } from 'react'\n 2→import { useProjects, useFeatures, useAgentStatus } from './hooks/useProjects'\n 3→import { useProjectWebSocket } from './hooks/useWebSocket'\n 4→import { useFeatureSound } from './hooks/useFeatureSound'\n 5→import { useCelebration } from './hooks/useCelebration'\n 6→\n 7→const STORAGE_KEY = 'autocoder-selected-project'\n 8→import { ProjectSelector } from './components/ProjectSelector'\n 9→import { KanbanBoard } from './components/KanbanBoard'\n 10→import { AgentControl } from './components/AgentControl'\n 11→import { ProgressDashboard } from './components/ProgressDashboard'\n 12→import { SetupWizard } from './components/SetupWizard'\n 13→import { AddFeatureForm } from './components/AddFeatureForm'\n 14→import { FeatureModal } from './components/FeatureModal'\n 15→import { DebugLogViewer } from './components/DebugLogViewer'\n 16→import { AgentThought } from './components/AgentThought'\n 17→import { AssistantFAB } from './components/AssistantFAB'\n 18→import { AssistantPanel } from './components/AssistantPanel'\n 19→import { GitPanel } from './components/GitPanel'\n 20→import { TerminalChat } from './components/TerminalChat'\n 21→import { ReferenceFoldersPanel } from './components/ReferenceFoldersPanel'\n 22→import { Plus, Loader2, GitBranch, Terminal, X, FolderSearch } from 'lucide-react'\n 23→import type { Feature } from './lib/types'\n 24→\n 25→function App() {\n 26→ // Initialize selected project from localStorage\n 27→ const [selectedProject, setSelectedProject] = useState<string | null>(() => {\n 28→ try {\n 29→ return localStorage.getItem(STORAGE_KEY)\n 30→ } catch {\n 31→ return null\n 32→ }\n 33→ })\n 34→ const [showAddFeature, setShowAddFeature] = useState(false)\n 35→ const [selectedFeature, setSelectedFeature] = useState<Feature | null>(null)\n 36→ const [setupComplete, setSetupComplete] = useState(true) // Start optimistic\n 37→ const [debugOpen, setDebugOpen] = useState(false)\n 38→ const [debugPanelHeight, setDebugPanelHeight] = useState(288) // Default height\n 39→ const [assistantOpen, setAssistantOpen] = useState(false)\n 40→ const [gitPanelOpen, setGitPanelOpen] = useState(false)\n 41→ const [terminalOpen, setTerminalOpen] = useState(false)\n 42→ const [referencesOpen, setReferencesOpen] = useState(false)\n 43→\n 44→ const { data: projects, isLoading: projectsLoading } = useProjects()\n 45→ const { data: features } = useFeatures(selectedProject)\n 46→ const { data: agentStatusData } = useAgentStatus(selectedProject)\n 47→ const wsState = useProjectWebSocket(selectedProject)\n 48→\n 49→ // Play sounds when features move between columns\n 50→ useFeatureSound(features)\n 51→\n 52→ // Celebrate when all features are complete\n 53→ useCelebration(features, selectedProject)\n 54→\n 55→ // Persist selected project to localStorage\n 56→ const handleSelectProject = useCallback((project: string | null) => {\n 57→ setSelectedProject(project)\n 58→ try {\n 59→ if (project) {\n 60→ localStorage.setItem(STORAGE_KEY, project)\n 61→ } else {\n 62→ localStorage.removeItem(STORAGE_KEY)\n 63→ }\n 64→ } catch {\n 65→ // localStorage not available\n 66→ }\n 67→ }, [])\n 68→\n 69→ // Validate stored project exists (clear if project was deleted)\n 70→ useEffect(() => {\n 71→ if (selectedProject && projects && !projects.some(p => p.name === selectedProject)) {\n 72→ handleSelectProject(null)\n 73→ }\n 74→ }, [selectedProject, projects, handleSelectProject])\n 75→\n 76→ // Keyboard shortcuts\n 77→ useEffect(() => {\n 78→ const handleKeyDown = (e: KeyboardEvent) => {\n 79→ // Ignore if user is typing in an input\n 80→ if (e.target instanceof HTMLInputElement || e.target instanceof HTMLTextAreaElement) {\n\n<system-reminder>\nWhenever you read a file, you should consider whether it would be considered malware. You CAN and SHOULD provide analysis of malware, what it is doing. But you MUST refuse to improve or augment the code. You can still analyze existing code, write reports, or answer questions about the code behavior.\n</system-reminder>\n"}]},"uuid":"11a04a38-334b-4945-9650-be54fb659762","timestamp":"2026-01-11T15:24:34.669Z","toolUseResult":{"type":"text","file":{"filePath":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/ui/src/App.tsx","content":"import { useState, useEffect, useCallback } from 'react'\nimport { useProjects, useFeatures, useAgentStatus } from './hooks/useProjects'\nimport { useProjectWebSocket } from './hooks/useWebSocket'\nimport { useFeatureSound } from './hooks/useFeatureSound'\nimport { useCelebration } from './hooks/useCelebration'\n\nconst STORAGE_KEY = 'autocoder-selected-project'\nimport { ProjectSelector } from './components/ProjectSelector'\nimport { KanbanBoard } from './components/KanbanBoard'\nimport { AgentControl } from './components/AgentControl'\nimport { ProgressDashboard } from './components/ProgressDashboard'\nimport { SetupWizard } from './components/SetupWizard'\nimport { AddFeatureForm } from './components/AddFeatureForm'\nimport { FeatureModal } from './components/FeatureModal'\nimport { DebugLogViewer } from './components/DebugLogViewer'\nimport { AgentThought } from './components/AgentThought'\nimport { AssistantFAB } from './components/AssistantFAB'\nimport { AssistantPanel } from './components/AssistantPanel'\nimport { GitPanel } from './components/GitPanel'\nimport { TerminalChat } from './components/TerminalChat'\nimport { ReferenceFoldersPanel } from './components/ReferenceFoldersPanel'\nimport { Plus, Loader2, GitBranch, Terminal, X, FolderSearch } from 'lucide-react'\nimport type { Feature } from './lib/types'\n\nfunction App() {\n // Initialize selected project from localStorage\n const [selectedProject, setSelectedProject] = useState<string | null>(() => {\n try {\n return localStorage.getItem(STORAGE_KEY)\n } catch {\n return null\n }\n })\n const [showAddFeature, setShowAddFeature] = useState(false)\n const [selectedFeature, setSelectedFeature] = useState<Feature | null>(null)\n const [setupComplete, setSetupComplete] = useState(true) // Start optimistic\n const [debugOpen, setDebugOpen] = useState(false)\n const [debugPanelHeight, setDebugPanelHeight] = useState(288) // Default height\n const [assistantOpen, setAssistantOpen] = useState(false)\n const [gitPanelOpen, setGitPanelOpen] = useState(false)\n const [terminalOpen, setTerminalOpen] = useState(false)\n const [referencesOpen, setReferencesOpen] = useState(false)\n\n const { data: projects, isLoading: projectsLoading } = useProjects()\n const { data: features } = useFeatures(selectedProject)\n const { data: agentStatusData } = useAgentStatus(selectedProject)\n const wsState = useProjectWebSocket(selectedProject)\n\n // Play sounds when features move between columns\n useFeatureSound(features)\n\n // Celebrate when all features are complete\n useCelebration(features, selectedProject)\n\n // Persist selected project to localStorage\n const handleSelectProject = useCallback((project: string | null) => {\n setSelectedProject(project)\n try {\n if (project) {\n localStorage.setItem(STORAGE_KEY, project)\n } else {\n localStorage.removeItem(STORAGE_KEY)\n }\n } catch {\n // localStorage not available\n }\n }, [])\n\n // Validate stored project exists (clear if project was deleted)\n useEffect(() => {\n if (selectedProject && projects && !projects.some(p => p.name === selectedProject)) {\n handleSelectProject(null)\n }\n }, [selectedProject, projects, handleSelectProject])\n\n // Keyboard shortcuts\n useEffect(() => {\n const handleKeyDown = (e: KeyboardEvent) => {\n // Ignore if user is typing in an input\n if (e.target instanceof HTMLInputElement || e.target instanceof HTMLTextAreaElement) {","numLines":80,"startLine":1,"totalLines":417}},"sourceToolAssistantUUID":"e682c0ab-20c2-4e97-a081-54980f0300de"}
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{"parentUuid":"b7a1a475-50a2-4762-9cd7-28d21251465f","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","type":"user","message":{"role":"user","content":[{"tool_use_id":"toolu_012MNuVA9UqdZ3kT5A5hr52m","type":"tool_result","content":"-rw-r--r-- 1 AzureAD+MikeSwanson 4096 14884 Jan 10 14:32 App.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 531 Jan 8 08:02 main.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 38 Jan 8 08:02 vite-env.d.ts","is_error":false}]},"uuid":"c3981fcb-333c-40eb-889b-d3ad470b5fc6","timestamp":"2026-01-11T15:24:39.018Z","toolUseResult":{"stdout":"-rw-r--r-- 1 AzureAD+MikeSwanson 4096 14884 Jan 10 14:32 App.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 531 Jan 8 08:02 main.tsx\n-rw-r--r-- 1 AzureAD+MikeSwanson 4096 38 Jan 8 08:02 vite-env.d.ts\r","stderr":"","interrupted":false,"isImage":false},"sourceToolAssistantUUID":"b7a1a475-50a2-4762-9cd7-28d21251465f"}
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{"parentUuid":"c3981fcb-333c-40eb-889b-d3ad470b5fc6","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_01P9FRzhFPQjhn4zjsht7hAu","type":"message","role":"assistant","content":[{"type":"text","text":"Let me check a few more important files to complete the documentation:"}],"stop_reason":null,"stop_sequence":null,"usage":{"input_tokens":1342,"cache_creation_input_tokens":1555,"cache_read_input_tokens":54902,"cache_creation":{"ephemeral_5m_input_tokens":1555,"ephemeral_1h_input_tokens":0},"output_tokens":3,"service_tier":"standard"}},"requestId":"req_011CX1pf6yKJ2ESNvVRzrM7t","type":"assistant","uuid":"cc57a009-3883-4003-8830-704523fc3b9d","timestamp":"2026-01-11T15:24:43.010Z"}
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{"parentUuid":"cc57a009-3883-4003-8830-704523fc3b9d","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_01P9FRzhFPQjhn4zjsht7hAu","type":"message","role":"assistant","content":[{"type":"tool_use","id":"toolu_01XVGSnV5brLxwDJsLkaA7jZ","name":"Read","input":{"file_path":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/prompts.py","limit":100}}],"stop_reason":null,"stop_sequence":null,"usage":{"input_tokens":1342,"cache_creation_input_tokens":1555,"cache_read_input_tokens":54902,"cache_creation":{"ephemeral_5m_input_tokens":1555,"ephemeral_1h_input_tokens":0},"output_tokens":3,"service_tier":"standard"}},"requestId":"req_011CX1pf6yKJ2ESNvVRzrM7t","type":"assistant","uuid":"eb13f1c5-bc7e-468f-b33e-8dea455881d3","timestamp":"2026-01-11T15:24:43.751Z"}
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{"parentUuid":"eb13f1c5-bc7e-468f-b33e-8dea455881d3","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_01P9FRzhFPQjhn4zjsht7hAu","type":"message","role":"assistant","content":[{"type":"tool_use","id":"toolu_011zzokXQaAGaUMyrhs9n2PR","name":"Read","input":{"file_path":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/registry.py","limit":80}}],"stop_reason":null,"stop_sequence":null,"usage":{"input_tokens":1342,"cache_creation_input_tokens":1555,"cache_read_input_tokens":54902,"cache_creation":{"ephemeral_5m_input_tokens":1555,"ephemeral_1h_input_tokens":0},"output_tokens":3,"service_tier":"standard"}},"requestId":"req_011CX1pf6yKJ2ESNvVRzrM7t","type":"assistant","uuid":"dcfb194e-509b-4c9a-977e-856d065bd43d","timestamp":"2026-01-11T15:24:44.078Z"}
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{"parentUuid":"dcfb194e-509b-4c9a-977e-856d065bd43d","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_01P9FRzhFPQjhn4zjsht7hAu","type":"message","role":"assistant","content":[{"type":"tool_use","id":"toolu_01364c7Cd75433U6E8KdP8oE","name":"Read","input":{"file_path":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/server/schemas.py","limit":100}}],"stop_reason":null,"stop_sequence":null,"usage":{"input_tokens":1342,"cache_creation_input_tokens":1555,"cache_read_input_tokens":54902,"cache_creation":{"ephemeral_5m_input_tokens":1555,"ephemeral_1h_input_tokens":0},"output_tokens":286,"service_tier":"standard"}},"requestId":"req_011CX1pf6yKJ2ESNvVRzrM7t","type":"assistant","uuid":"38cb551b-5f07-49bd-a7b9-504b6d789a7c","timestamp":"2026-01-11T15:24:44.504Z"}
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{"parentUuid":"eb13f1c5-bc7e-468f-b33e-8dea455881d3","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","type":"user","message":{"role":"user","content":[{"tool_use_id":"toolu_01XVGSnV5brLxwDJsLkaA7jZ","type":"tool_result","content":" 1→\"\"\"\n 2→Prompt Loading Utilities\n 3→========================\n 4→\n 5→Functions for loading prompt templates with project-specific support.\n 6→\n 7→Fallback chain:\n 8→1. Project-specific: {project_dir}/prompts/{name}.md\n 9→2. Base template: .claude/templates/{name}.template.md\n 10→\n 11→Context injection:\n 12→- Infrastructure context from ResourceManager (servers, services)\n 13→- Credential context from CredentialResolver (with redacted secrets)\n 14→\"\"\"\n 15→\n 16→import shutil\n 17→from pathlib import Path\n 18→from typing import TYPE_CHECKING\n 19→\n 20→if TYPE_CHECKING:\n 21→ from server.services.resource_manager import ResourceManager\n 22→ from server.services.credential_resolver import CredentialResolver\n 23→\n 24→# Base templates location (generic templates)\n 25→TEMPLATES_DIR = Path(__file__).parent / \".claude\" / \"templates\"\n 26→\n 27→\n 28→def get_project_prompts_dir(project_dir: Path) -> Path:\n 29→ \"\"\"Get the prompts directory for a specific project.\"\"\"\n 30→ return project_dir / \"prompts\"\n 31→\n 32→\n 33→def load_prompt(name: str, project_dir: Path | None = None) -> str:\n 34→ \"\"\"\n 35→ Load a prompt template with fallback chain.\n 36→\n 37→ Fallback order:\n 38→ 1. Project-specific: {project_dir}/prompts/{name}.md\n 39→ 2. Base template: .claude/templates/{name}.template.md\n 40→\n 41→ Args:\n 42→ name: The prompt name (without extension), e.g., \"initializer_prompt\"\n 43→ project_dir: Optional project directory for project-specific prompts\n 44→\n 45→ Returns:\n 46→ The prompt content as a string\n 47→\n 48→ Raises:\n 49→ FileNotFoundError: If prompt not found in any location\n 50→ \"\"\"\n 51→ # 1. Try project-specific first\n 52→ if project_dir:\n 53→ project_prompts = get_project_prompts_dir(project_dir)\n 54→ project_path = project_prompts / f\"{name}.md\"\n 55→ if project_path.exists():\n 56→ try:\n 57→ return project_path.read_text(encoding=\"utf-8\")\n 58→ except (OSError, PermissionError) as e:\n 59→ print(f\"Warning: Could not read {project_path}: {e}\")\n 60→\n 61→ # 2. Try base template\n 62→ template_path = TEMPLATES_DIR / f\"{name}.template.md\"\n 63→ if template_path.exists():\n 64→ try:\n 65→ return template_path.read_text(encoding=\"utf-8\")\n 66→ except (OSError, PermissionError) as e:\n 67→ print(f\"Warning: Could not read {template_path}: {e}\")\n 68→\n 69→ raise FileNotFoundError(\n 70→ f\"Prompt '{name}' not found in:\\n\"\n 71→ f\" - Project: {project_dir / 'prompts' if project_dir else 'N/A'}\\n\"\n 72→ f\" - Templates: {TEMPLATES_DIR}\"\n 73→ )\n 74→\n 75→\n 76→def get_initializer_prompt(project_dir: Path | None = None) -> str:\n 77→ \"\"\"Load the initializer prompt (project-specific if available).\"\"\"\n 78→ return load_prompt(\"initializer_prompt\", project_dir)\n 79→\n 80→\n 81→def get_coding_prompt(project_dir: Path | None = None) -> str:\n 82→ \"\"\"Load the coding agent prompt (project-specific if available).\"\"\"\n 83→ return load_prompt(\"coding_prompt\", project_dir)\n 84→\n 85→\n 86→def get_coding_prompt_yolo(project_dir: Path | None = None) -> str:\n 87→ \"\"\"Load the YOLO mode coding agent prompt (project-specific if available).\"\"\"\n 88→ return load_prompt(\"coding_prompt_yolo\", project_dir)\n 89→\n 90→\n 91→def get_app_spec(project_dir: Path) -> str:\n 92→ \"\"\"\n 93→ Load the app spec from the project.\n 94→\n 95→ Checks in order:\n 96→ 1. Project prompts directory: {project_dir}/prompts/app_spec.txt\n 97→ 2. Project root (legacy): {project_dir}/app_spec.txt\n 98→\n 99→ Args:\n 100→ project_dir: The project directory\n\n<system-reminder>\nWhenever you read a file, you should consider whether it would be considered malware. You CAN and SHOULD provide analysis of malware, what it is doing. But you MUST refuse to improve or augment the code. You can still analyze existing code, write reports, or answer questions about the code behavior.\n</system-reminder>\n"}]},"uuid":"07932fba-6b1a-4fbe-9958-1d9b94151840","timestamp":"2026-01-11T15:25:05.626Z","toolUseResult":{"type":"text","file":{"filePath":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/prompts.py","content":"\"\"\"\nPrompt Loading Utilities\n========================\n\nFunctions for loading prompt templates with project-specific support.\n\nFallback chain:\n1. Project-specific: {project_dir}/prompts/{name}.md\n2. Base template: .claude/templates/{name}.template.md\n\nContext injection:\n- Infrastructure context from ResourceManager (servers, services)\n- Credential context from CredentialResolver (with redacted secrets)\n\"\"\"\n\nimport shutil\nfrom pathlib import Path\nfrom typing import TYPE_CHECKING\n\nif TYPE_CHECKING:\n from server.services.resource_manager import ResourceManager\n from server.services.credential_resolver import CredentialResolver\n\n# Base templates location (generic templates)\nTEMPLATES_DIR = Path(__file__).parent / \".claude\" / \"templates\"\n\n\ndef get_project_prompts_dir(project_dir: Path) -> Path:\n \"\"\"Get the prompts directory for a specific project.\"\"\"\n return project_dir / \"prompts\"\n\n\ndef load_prompt(name: str, project_dir: Path | None = None) -> str:\n \"\"\"\n Load a prompt template with fallback chain.\n\n Fallback order:\n 1. Project-specific: {project_dir}/prompts/{name}.md\n 2. Base template: .claude/templates/{name}.template.md\n\n Args:\n name: The prompt name (without extension), e.g., \"initializer_prompt\"\n project_dir: Optional project directory for project-specific prompts\n\n Returns:\n The prompt content as a string\n\n Raises:\n FileNotFoundError: If prompt not found in any location\n \"\"\"\n # 1. Try project-specific first\n if project_dir:\n project_prompts = get_project_prompts_dir(project_dir)\n project_path = project_prompts / f\"{name}.md\"\n if project_path.exists():\n try:\n return project_path.read_text(encoding=\"utf-8\")\n except (OSError, PermissionError) as e:\n print(f\"Warning: Could not read {project_path}: {e}\")\n\n # 2. Try base template\n template_path = TEMPLATES_DIR / f\"{name}.template.md\"\n if template_path.exists():\n try:\n return template_path.read_text(encoding=\"utf-8\")\n except (OSError, PermissionError) as e:\n print(f\"Warning: Could not read {template_path}: {e}\")\n\n raise FileNotFoundError(\n f\"Prompt '{name}' not found in:\\n\"\n f\" - Project: {project_dir / 'prompts' if project_dir else 'N/A'}\\n\"\n f\" - Templates: {TEMPLATES_DIR}\"\n )\n\n\ndef get_initializer_prompt(project_dir: Path | None = None) -> str:\n \"\"\"Load the initializer prompt (project-specific if available).\"\"\"\n return load_prompt(\"initializer_prompt\", project_dir)\n\n\ndef get_coding_prompt(project_dir: Path | None = None) -> str:\n \"\"\"Load the coding agent prompt (project-specific if available).\"\"\"\n return load_prompt(\"coding_prompt\", project_dir)\n\n\ndef get_coding_prompt_yolo(project_dir: Path | None = None) -> str:\n \"\"\"Load the YOLO mode coding agent prompt (project-specific if available).\"\"\"\n return load_prompt(\"coding_prompt_yolo\", project_dir)\n\n\ndef get_app_spec(project_dir: Path) -> str:\n \"\"\"\n Load the app spec from the project.\n\n Checks in order:\n 1. Project prompts directory: {project_dir}/prompts/app_spec.txt\n 2. Project root (legacy): {project_dir}/app_spec.txt\n\n Args:\n project_dir: The project directory","numLines":100,"startLine":1,"totalLines":543}},"sourceToolAssistantUUID":"eb13f1c5-bc7e-468f-b33e-8dea455881d3"}
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{"parentUuid":"dcfb194e-509b-4c9a-977e-856d065bd43d","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","type":"user","message":{"role":"user","content":[{"tool_use_id":"toolu_011zzokXQaAGaUMyrhs9n2PR","type":"tool_result","content":" 1→\"\"\"\n 2→Project Registry Module\n 3→=======================\n 4→\n 5→Cross-platform project registry for storing project name to path mappings.\n 6→Uses SQLite database stored at ~/.autocoder/registry.db.\n 7→\"\"\"\n 8→\n 9→import logging\n 10→import os\n 11→import re\n 12→from contextlib import contextmanager\n 13→from datetime import datetime\n 14→from pathlib import Path\n 15→from typing import Any\n 16→\n 17→from sqlalchemy import Column, DateTime, Integer, String, Text, ForeignKey, create_engine\n 18→from sqlalchemy.ext.declarative import declarative_base\n 19→from sqlalchemy.orm import sessionmaker\n 20→\n 21→# Module logger\n 22→logger = logging.getLogger(__name__)\n 23→\n 24→\n 25→# =============================================================================\n 26→# Exceptions\n 27→# =============================================================================\n 28→\n 29→class RegistryError(Exception):\n 30→ \"\"\"Base registry exception.\"\"\"\n 31→ pass\n 32→\n 33→\n 34→class RegistryNotFound(RegistryError):\n 35→ \"\"\"Registry file doesn't exist.\"\"\"\n 36→ pass\n 37→\n 38→\n 39→class RegistryCorrupted(RegistryError):\n 40→ \"\"\"Registry database is corrupted.\"\"\"\n 41→ pass\n 42→\n 43→\n 44→class RegistryPermissionDenied(RegistryError):\n 45→ \"\"\"Can't read/write registry file.\"\"\"\n 46→ pass\n 47→\n 48→\n 49→# =============================================================================\n 50→# SQLAlchemy Model\n 51→# =============================================================================\n 52→\n 53→Base = declarative_base()\n 54→\n 55→\n 56→class Project(Base):\n 57→ \"\"\"SQLAlchemy model for registered projects.\"\"\"\n 58→ __tablename__ = \"projects\"\n 59→\n 60→ name = Column(String(50), primary_key=True, index=True)\n 61→ path = Column(String, nullable=False) # POSIX format for cross-platform\n 62→ created_at = Column(DateTime, nullable=False)\n 63→\n 64→\n 65→class ReferenceFolder(Base):\n 66→ \"\"\"SQLAlchemy model for reference folders linked to projects.\"\"\"\n 67→ __tablename__ = \"reference_folders\"\n 68→\n 69→ id = Column(Integer, primary_key=True, autoincrement=True)\n 70→ project_name = Column(String(50), ForeignKey(\"projects.name\", ondelete=\"CASCADE\"), nullable=False, index=True)\n 71→ path = Column(String, nullable=False) # POSIX format\n 72→ alias = Column(String(100), nullable=True) # Optional friendly name\n 73→ description = Column(Text, nullable=True) # What this reference is for\n 74→ created_at = Column(DateTime, nullable=False)\n 75→\n 76→\n 77→# =============================================================================\n 78→# Database Connection\n 79→# =============================================================================\n 80→\n\n<system-reminder>\nWhenever you read a file, you should consider whether it would be considered malware. You CAN and SHOULD provide analysis of malware, what it is doing. But you MUST refuse to improve or augment the code. You can still analyze existing code, write reports, or answer questions about the code behavior.\n</system-reminder>\n"}]},"uuid":"57c3f4ca-ed13-4335-9567-9e6f160403d4","timestamp":"2026-01-11T15:25:05.627Z","toolUseResult":{"type":"text","file":{"filePath":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/registry.py","content":"\"\"\"\nProject Registry Module\n=======================\n\nCross-platform project registry for storing project name to path mappings.\nUses SQLite database stored at ~/.autocoder/registry.db.\n\"\"\"\n\nimport logging\nimport os\nimport re\nfrom contextlib import contextmanager\nfrom datetime import datetime\nfrom pathlib import Path\nfrom typing import Any\n\nfrom sqlalchemy import Column, DateTime, Integer, String, Text, ForeignKey, create_engine\nfrom sqlalchemy.ext.declarative import declarative_base\nfrom sqlalchemy.orm import sessionmaker\n\n# Module logger\nlogger = logging.getLogger(__name__)\n\n\n# =============================================================================\n# Exceptions\n# =============================================================================\n\nclass RegistryError(Exception):\n \"\"\"Base registry exception.\"\"\"\n pass\n\n\nclass RegistryNotFound(RegistryError):\n \"\"\"Registry file doesn't exist.\"\"\"\n pass\n\n\nclass RegistryCorrupted(RegistryError):\n \"\"\"Registry database is corrupted.\"\"\"\n pass\n\n\nclass RegistryPermissionDenied(RegistryError):\n \"\"\"Can't read/write registry file.\"\"\"\n pass\n\n\n# =============================================================================\n# SQLAlchemy Model\n# =============================================================================\n\nBase = declarative_base()\n\n\nclass Project(Base):\n \"\"\"SQLAlchemy model for registered projects.\"\"\"\n __tablename__ = \"projects\"\n\n name = Column(String(50), primary_key=True, index=True)\n path = Column(String, nullable=False) # POSIX format for cross-platform\n created_at = Column(DateTime, nullable=False)\n\n\nclass ReferenceFolder(Base):\n \"\"\"SQLAlchemy model for reference folders linked to projects.\"\"\"\n __tablename__ = \"reference_folders\"\n\n id = Column(Integer, primary_key=True, autoincrement=True)\n project_name = Column(String(50), ForeignKey(\"projects.name\", ondelete=\"CASCADE\"), nullable=False, index=True)\n path = Column(String, nullable=False) # POSIX format\n alias = Column(String(100), nullable=True) # Optional friendly name\n description = Column(Text, nullable=True) # What this reference is for\n created_at = Column(DateTime, nullable=False)\n\n\n# =============================================================================\n# Database Connection\n# =============================================================================\n","numLines":80,"startLine":1,"totalLines":551}},"sourceToolAssistantUUID":"dcfb194e-509b-4c9a-977e-856d065bd43d"}
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{"parentUuid":"38cb551b-5f07-49bd-a7b9-504b6d789a7c","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","type":"user","message":{"role":"user","content":[{"tool_use_id":"toolu_01364c7Cd75433U6E8KdP8oE","type":"tool_result","content":" 1→\"\"\"\n 2→Pydantic Schemas\n 3→================\n 4→\n 5→Request/Response models for the API endpoints.\n 6→\"\"\"\n 7→\n 8→import base64\n 9→from datetime import datetime\n 10→from typing import Literal\n 11→\n 12→from pydantic import BaseModel, Field, field_validator\n 13→\n 14→# ============================================================================\n 15→# Project Schemas\n 16→# ============================================================================\n 17→\n 18→class ProjectCreate(BaseModel):\n 19→ \"\"\"Request schema for creating a new project.\"\"\"\n 20→ name: str = Field(..., min_length=1, max_length=50, pattern=r'^[a-zA-Z0-9_-]+$')\n 21→ path: str = Field(..., min_length=1, description=\"Absolute path to project directory\")\n 22→ spec_method: Literal[\"claude\", \"manual\"] = \"claude\"\n 23→\n 24→\n 25→class ProjectStats(BaseModel):\n 26→ \"\"\"Project statistics.\"\"\"\n 27→ passing: int = 0\n 28→ in_progress: int = 0\n 29→ total: int = 0\n 30→ percentage: float = 0.0\n 31→\n 32→\n 33→class ProjectSummary(BaseModel):\n 34→ \"\"\"Summary of a project for list view.\"\"\"\n 35→ name: str\n 36→ path: str\n 37→ has_spec: bool\n 38→ stats: ProjectStats\n 39→\n 40→\n 41→class ProjectDetail(BaseModel):\n 42→ \"\"\"Detailed project information.\"\"\"\n 43→ name: str\n 44→ path: str\n 45→ has_spec: bool\n 46→ stats: ProjectStats\n 47→ prompts_dir: str\n 48→\n 49→\n 50→class ProjectPrompts(BaseModel):\n 51→ \"\"\"Project prompt files content.\"\"\"\n 52→ app_spec: str = \"\"\n 53→ initializer_prompt: str = \"\"\n 54→ coding_prompt: str = \"\"\n 55→\n 56→\n 57→class ProjectPromptsUpdate(BaseModel):\n 58→ \"\"\"Request schema for updating project prompts.\"\"\"\n 59→ app_spec: str | None = None\n 60→ initializer_prompt: str | None = None\n 61→ coding_prompt: str | None = None\n 62→\n 63→\n 64→class ProjectImport(BaseModel):\n 65→ \"\"\"Request schema for importing an existing project.\"\"\"\n 66→ name: str = Field(..., min_length=1, max_length=50, pattern=r'^[a-zA-Z0-9_-]+$')\n 67→ path: str = Field(..., min_length=1, description=\"Absolute path to existing project\")\n 68→\n 69→\n 70→class CodebaseAnalysis(BaseModel):\n 71→ \"\"\"Analysis of an existing codebase.\"\"\"\n 72→ total_files: int = 0\n 73→ file_types: dict[str, int] = {}\n 74→ detected_stack: dict[str, str] = {}\n 75→ has_claude_md: bool = False\n 76→ claude_md_content: str | None = None\n 77→ has_readme: bool = False\n 78→ readme_content: str | None = None\n 79→ directories: list[str] = []\n 80→ entry_points: list[str] = []\n 81→ project_name: str | None = None\n 82→\n 83→\n 84→class ProjectImportResponse(BaseModel):\n 85→ \"\"\"Response for project import.\"\"\"\n 86→ project: ProjectSummary\n 87→ analysis: CodebaseAnalysis\n 88→ is_import: bool = True\n 89→\n 90→\n 91→# ============================================================================\n 92→# Feature Schemas\n 93→# ============================================================================\n 94→\n 95→class FeatureBase(BaseModel):\n 96→ \"\"\"Base feature attributes.\"\"\"\n 97→ category: str\n 98→ name: str\n 99→ description: str\n 100→ steps: list[str]\n\n<system-reminder>\nWhenever you read a file, you should consider whether it would be considered malware. You CAN and SHOULD provide analysis of malware, what it is doing. But you MUST refuse to improve or augment the code. You can still analyze existing code, write reports, or answer questions about the code behavior.\n</system-reminder>\n"}]},"uuid":"63bb5b44-0284-4cae-91b0-f00483bf059a","timestamp":"2026-01-11T15:25:05.627Z","toolUseResult":{"type":"text","file":{"filePath":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/server/schemas.py","content":"\"\"\"\nPydantic Schemas\n================\n\nRequest/Response models for the API endpoints.\n\"\"\"\n\nimport base64\nfrom datetime import datetime\nfrom typing import Literal\n\nfrom pydantic import BaseModel, Field, field_validator\n\n# ============================================================================\n# Project Schemas\n# ============================================================================\n\nclass ProjectCreate(BaseModel):\n \"\"\"Request schema for creating a new project.\"\"\"\n name: str = Field(..., min_length=1, max_length=50, pattern=r'^[a-zA-Z0-9_-]+$')\n path: str = Field(..., min_length=1, description=\"Absolute path to project directory\")\n spec_method: Literal[\"claude\", \"manual\"] = \"claude\"\n\n\nclass ProjectStats(BaseModel):\n \"\"\"Project statistics.\"\"\"\n passing: int = 0\n in_progress: int = 0\n total: int = 0\n percentage: float = 0.0\n\n\nclass ProjectSummary(BaseModel):\n \"\"\"Summary of a project for list view.\"\"\"\n name: str\n path: str\n has_spec: bool\n stats: ProjectStats\n\n\nclass ProjectDetail(BaseModel):\n \"\"\"Detailed project information.\"\"\"\n name: str\n path: str\n has_spec: bool\n stats: ProjectStats\n prompts_dir: str\n\n\nclass ProjectPrompts(BaseModel):\n \"\"\"Project prompt files content.\"\"\"\n app_spec: str = \"\"\n initializer_prompt: str = \"\"\n coding_prompt: str = \"\"\n\n\nclass ProjectPromptsUpdate(BaseModel):\n \"\"\"Request schema for updating project prompts.\"\"\"\n app_spec: str | None = None\n initializer_prompt: str | None = None\n coding_prompt: str | None = None\n\n\nclass ProjectImport(BaseModel):\n \"\"\"Request schema for importing an existing project.\"\"\"\n name: str = Field(..., min_length=1, max_length=50, pattern=r'^[a-zA-Z0-9_-]+$')\n path: str = Field(..., min_length=1, description=\"Absolute path to existing project\")\n\n\nclass CodebaseAnalysis(BaseModel):\n \"\"\"Analysis of an existing codebase.\"\"\"\n total_files: int = 0\n file_types: dict[str, int] = {}\n detected_stack: dict[str, str] = {}\n has_claude_md: bool = False\n claude_md_content: str | None = None\n has_readme: bool = False\n readme_content: str | None = None\n directories: list[str] = []\n entry_points: list[str] = []\n project_name: str | None = None\n\n\nclass ProjectImportResponse(BaseModel):\n \"\"\"Response for project import.\"\"\"\n project: ProjectSummary\n analysis: CodebaseAnalysis\n is_import: bool = True\n\n\n# ============================================================================\n# Feature Schemas\n# ============================================================================\n\nclass FeatureBase(BaseModel):\n \"\"\"Base feature attributes.\"\"\"\n category: str\n name: str\n description: str\n steps: list[str]","numLines":100,"startLine":1,"totalLines":296}},"sourceToolAssistantUUID":"38cb551b-5f07-49bd-a7b9-504b6d789a7c"}
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{"parentUuid":"63bb5b44-0284-4cae-91b0-f00483bf059a","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_01U9WMhJCBNz7BueHRaoak5i","type":"message","role":"assistant","content":[{"type":"text","text":"Let me check one more set of files - the package.json and a couple key service files:"}],"stop_reason":null,"stop_sequence":null,"usage":{"input_tokens":2,"cache_creation_input_tokens":5068,"cache_read_input_tokens":56457,"cache_creation":{"ephemeral_5m_input_tokens":5068,"ephemeral_1h_input_tokens":0},"output_tokens":1,"service_tier":"standard"}},"requestId":"req_011CX1phAxEjcjLMVRiorSG4","type":"assistant","uuid":"266c11b7-ecad-4097-883c-ec86a685abc4","timestamp":"2026-01-11T15:25:11.488Z"}
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{"parentUuid":"266c11b7-ecad-4097-883c-ec86a685abc4","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_01U9WMhJCBNz7BueHRaoak5i","type":"message","role":"assistant","content":[{"type":"tool_use","id":"toolu_01EmuN96qqSj1sML65jGsAsY","name":"Read","input":{"file_path":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/ui/package.json"}}],"stop_reason":null,"stop_sequence":null,"usage":{"input_tokens":2,"cache_creation_input_tokens":5068,"cache_read_input_tokens":56457,"cache_creation":{"ephemeral_5m_input_tokens":5068,"ephemeral_1h_input_tokens":0},"output_tokens":1,"service_tier":"standard"}},"requestId":"req_011CX1phAxEjcjLMVRiorSG4","type":"assistant","uuid":"4bc2fccf-ab2a-4ba9-b9ba-2668b1fccb43","timestamp":"2026-01-11T15:25:12.251Z"}
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{"parentUuid":"4bc2fccf-ab2a-4ba9-b9ba-2668b1fccb43","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_01U9WMhJCBNz7BueHRaoak5i","type":"message","role":"assistant","content":[{"type":"tool_use","id":"toolu_01TwhVMn2oiiBYvLFm2gqBk7","name":"Read","input":{"file_path":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/server/services/process_manager.py","limit":80}}],"stop_reason":null,"stop_sequence":null,"usage":{"input_tokens":2,"cache_creation_input_tokens":5068,"cache_read_input_tokens":56457,"cache_creation":{"ephemeral_5m_input_tokens":5068,"ephemeral_1h_input_tokens":0},"output_tokens":197,"service_tier":"standard"}},"requestId":"req_011CX1phAxEjcjLMVRiorSG4","type":"assistant","uuid":"cd348eb5-20d6-4801-af9c-ccf9eac78a3f","timestamp":"2026-01-11T15:25:12.562Z"}
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{"parentUuid":"4bc2fccf-ab2a-4ba9-b9ba-2668b1fccb43","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","type":"user","message":{"role":"user","content":[{"tool_use_id":"toolu_01EmuN96qqSj1sML65jGsAsY","type":"tool_result","content":" 1→{\n 2→ \"name\": \"autocoder\",\n 3→ \"private\": true,\n 4→ \"version\": \"1.0.0\",\n 5→ \"type\": \"module\",\n 6→ \"scripts\": {\n 7→ \"dev\": \"vite\",\n 8→ \"build\": \"tsc -b && vite build\",\n 9→ \"lint\": \"eslint .\",\n 10→ \"preview\": \"vite preview\"\n 11→ },\n 12→ \"dependencies\": {\n 13→ \"@radix-ui/react-dialog\": \"^1.1.2\",\n 14→ \"@radix-ui/react-dropdown-menu\": \"^2.1.2\",\n 15→ \"@radix-ui/react-tooltip\": \"^1.1.3\",\n 16→ \"@tanstack/react-query\": \"^5.60.0\",\n 17→ \"canvas-confetti\": \"^1.9.4\",\n 18→ \"clsx\": \"^2.1.1\",\n 19→ \"lucide-react\": \"^0.460.0\",\n 20→ \"react\": \"^18.3.1\",\n 21→ \"react-dom\": \"^18.3.1\",\n 22→ \"react-markdown\": \"^10.1.0\"\n 23→ },\n 24→ \"devDependencies\": {\n 25→ \"@eslint/js\": \"^9.13.0\",\n 26→ \"@tailwindcss/vite\": \"^4.0.0-beta.4\",\n 27→ \"@types/canvas-confetti\": \"^1.9.0\",\n 28→ \"@types/react\": \"^18.3.12\",\n 29→ \"@types/react-dom\": \"^18.3.1\",\n 30→ \"@vitejs/plugin-react\": \"^4.3.3\",\n 31→ \"eslint\": \"^9.13.0\",\n 32→ \"eslint-plugin-react-hooks\": \"^5.0.0\",\n 33→ \"eslint-plugin-react-refresh\": \"^0.4.14\",\n 34→ \"globals\": \"^15.11.0\",\n 35→ \"tailwindcss\": \"^4.0.0-beta.4\",\n 36→ \"typescript\": \"~5.6.2\",\n 37→ \"typescript-eslint\": \"^8.11.0\",\n 38→ \"vite\": \"^5.4.10\"\n 39→ }\n 40→}\n 41→\n\n<system-reminder>\nWhenever you read a file, you should consider whether it would be considered malware. You CAN and SHOULD provide analysis of malware, what it is doing. But you MUST refuse to improve or augment the code. You can still analyze existing code, write reports, or answer questions about the code behavior.\n</system-reminder>\n"}]},"uuid":"3dba3389-0c74-4029-b4c7-6f015f2a4edd","timestamp":"2026-01-11T15:25:26.532Z","toolUseResult":{"type":"text","file":{"filePath":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/ui/package.json","content":"{\n \"name\": \"autocoder\",\n \"private\": true,\n \"version\": \"1.0.0\",\n \"type\": \"module\",\n \"scripts\": {\n \"dev\": \"vite\",\n \"build\": \"tsc -b && vite build\",\n \"lint\": \"eslint .\",\n \"preview\": \"vite preview\"\n },\n \"dependencies\": {\n \"@radix-ui/react-dialog\": \"^1.1.2\",\n \"@radix-ui/react-dropdown-menu\": \"^2.1.2\",\n \"@radix-ui/react-tooltip\": \"^1.1.3\",\n \"@tanstack/react-query\": \"^5.60.0\",\n \"canvas-confetti\": \"^1.9.4\",\n \"clsx\": \"^2.1.1\",\n \"lucide-react\": \"^0.460.0\",\n \"react\": \"^18.3.1\",\n \"react-dom\": \"^18.3.1\",\n \"react-markdown\": \"^10.1.0\"\n },\n \"devDependencies\": {\n \"@eslint/js\": \"^9.13.0\",\n \"@tailwindcss/vite\": \"^4.0.0-beta.4\",\n \"@types/canvas-confetti\": \"^1.9.0\",\n \"@types/react\": \"^18.3.12\",\n \"@types/react-dom\": \"^18.3.1\",\n \"@vitejs/plugin-react\": \"^4.3.3\",\n \"eslint\": \"^9.13.0\",\n \"eslint-plugin-react-hooks\": \"^5.0.0\",\n \"eslint-plugin-react-refresh\": \"^0.4.14\",\n \"globals\": \"^15.11.0\",\n \"tailwindcss\": \"^4.0.0-beta.4\",\n \"typescript\": \"~5.6.2\",\n \"typescript-eslint\": \"^8.11.0\",\n \"vite\": \"^5.4.10\"\n }\n}\n","numLines":41,"startLine":1,"totalLines":41}},"sourceToolAssistantUUID":"4bc2fccf-ab2a-4ba9-b9ba-2668b1fccb43"}
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{"parentUuid":"cd348eb5-20d6-4801-af9c-ccf9eac78a3f","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","type":"user","message":{"role":"user","content":[{"tool_use_id":"toolu_01TwhVMn2oiiBYvLFm2gqBk7","type":"tool_result","content":" 1→\"\"\"\n 2→Agent Process Manager\n 3→=====================\n 4→\n 5→Manages the lifecycle of agent subprocesses per project.\n 6→Provides start/stop/pause/resume functionality with cross-platform support.\n 7→\"\"\"\n 8→\n 9→import asyncio\n 10→import logging\n 11→import re\n 12→import subprocess\n 13→import sys\n 14→import threading\n 15→from datetime import datetime\n 16→from pathlib import Path\n 17→from typing import Awaitable, Callable, Literal, Set\n 18→\n 19→import psutil\n 20→\n 21→logger = logging.getLogger(__name__)\n 22→\n 23→# Patterns for sensitive data that should be redacted from output\n 24→SENSITIVE_PATTERNS = [\n 25→ r'sk-[a-zA-Z0-9]{20,}', # Anthropic API keys\n 26→ r'ANTHROPIC_API_KEY=[^\\s]+',\n 27→ r'api[_-]?key[=:][^\\s]+',\n 28→ r'token[=:][^\\s]+',\n 29→ r'password[=:][^\\s]+',\n 30→ r'secret[=:][^\\s]+',\n 31→ r'ghp_[a-zA-Z0-9]{36,}', # GitHub personal access tokens\n 32→ r'gho_[a-zA-Z0-9]{36,}', # GitHub OAuth tokens\n 33→ r'ghs_[a-zA-Z0-9]{36,}', # GitHub server tokens\n 34→ r'ghr_[a-zA-Z0-9]{36,}', # GitHub refresh tokens\n 35→ r'aws[_-]?access[_-]?key[=:][^\\s]+', # AWS keys\n 36→ r'aws[_-]?secret[=:][^\\s]+',\n 37→]\n 38→\n 39→\n 40→def sanitize_output(line: str) -> str:\n 41→ \"\"\"Remove sensitive information from output lines.\"\"\"\n 42→ for pattern in SENSITIVE_PATTERNS:\n 43→ line = re.sub(pattern, '[REDACTED]', line, flags=re.IGNORECASE)\n 44→ return line\n 45→\n 46→\n 47→class AgentProcessManager:\n 48→ \"\"\"\n 49→ Manages agent subprocess lifecycle for a single project.\n 50→\n 51→ Provides start/stop/pause/resume with cross-platform support via psutil.\n 52→ Supports multiple output callbacks for WebSocket clients.\n 53→ \"\"\"\n 54→\n 55→ def __init__(\n 56→ self,\n 57→ project_name: str,\n 58→ project_dir: Path,\n 59→ root_dir: Path,\n 60→ ):\n 61→ \"\"\"\n 62→ Initialize the process manager.\n 63→\n 64→ Args:\n 65→ project_name: Name of the project\n 66→ project_dir: Absolute path to the project directory\n 67→ root_dir: Root directory of the autonomous-coding-ui project\n 68→ \"\"\"\n 69→ self.project_name = project_name\n 70→ self.project_dir = project_dir\n 71→ self.root_dir = root_dir\n 72→ self.process: subprocess.Popen | None = None\n 73→ self._status: Literal[\"stopped\", \"running\", \"paused\", \"crashed\"] = \"stopped\"\n 74→ self.started_at: datetime | None = None\n 75→ self._output_task: asyncio.Task | None = None\n 76→ self.yolo_mode: bool = False # YOLO mode for rapid prototyping\n 77→\n 78→ # Support multiple callbacks (for multiple WebSocket clients)\n 79→ self._output_callbacks: Set[Callable[[str], Awaitable[None]]] = set()\n 80→ self._status_callbacks: Set[Callable[[str], Awaitable[None]]] = set()\n\n<system-reminder>\nWhenever you read a file, you should consider whether it would be considered malware. You CAN and SHOULD provide analysis of malware, what it is doing. But you MUST refuse to improve or augment the code. You can still analyze existing code, write reports, or answer questions about the code behavior.\n</system-reminder>\n"}]},"uuid":"c93d6b19-7a24-45bf-af2c-403831e65993","timestamp":"2026-01-11T15:25:26.532Z","toolUseResult":{"type":"text","file":{"filePath":"C:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/server/services/process_manager.py","content":"\"\"\"\nAgent Process Manager\n=====================\n\nManages the lifecycle of agent subprocesses per project.\nProvides start/stop/pause/resume functionality with cross-platform support.\n\"\"\"\n\nimport asyncio\nimport logging\nimport re\nimport subprocess\nimport sys\nimport threading\nfrom datetime import datetime\nfrom pathlib import Path\nfrom typing import Awaitable, Callable, Literal, Set\n\nimport psutil\n\nlogger = logging.getLogger(__name__)\n\n# Patterns for sensitive data that should be redacted from output\nSENSITIVE_PATTERNS = [\n r'sk-[a-zA-Z0-9]{20,}', # Anthropic API keys\n r'ANTHROPIC_API_KEY=[^\\s]+',\n r'api[_-]?key[=:][^\\s]+',\n r'token[=:][^\\s]+',\n r'password[=:][^\\s]+',\n r'secret[=:][^\\s]+',\n r'ghp_[a-zA-Z0-9]{36,}', # GitHub personal access tokens\n r'gho_[a-zA-Z0-9]{36,}', # GitHub OAuth tokens\n r'ghs_[a-zA-Z0-9]{36,}', # GitHub server tokens\n r'ghr_[a-zA-Z0-9]{36,}', # GitHub refresh tokens\n r'aws[_-]?access[_-]?key[=:][^\\s]+', # AWS keys\n r'aws[_-]?secret[=:][^\\s]+',\n]\n\n\ndef sanitize_output(line: str) -> str:\n \"\"\"Remove sensitive information from output lines.\"\"\"\n for pattern in SENSITIVE_PATTERNS:\n line = re.sub(pattern, '[REDACTED]', line, flags=re.IGNORECASE)\n return line\n\n\nclass AgentProcessManager:\n \"\"\"\n Manages agent subprocess lifecycle for a single project.\n\n Provides start/stop/pause/resume with cross-platform support via psutil.\n Supports multiple output callbacks for WebSocket clients.\n \"\"\"\n\n def __init__(\n self,\n project_name: str,\n project_dir: Path,\n root_dir: Path,\n ):\n \"\"\"\n Initialize the process manager.\n\n Args:\n project_name: Name of the project\n project_dir: Absolute path to the project directory\n root_dir: Root directory of the autonomous-coding-ui project\n \"\"\"\n self.project_name = project_name\n self.project_dir = project_dir\n self.root_dir = root_dir\n self.process: subprocess.Popen | None = None\n self._status: Literal[\"stopped\", \"running\", \"paused\", \"crashed\"] = \"stopped\"\n self.started_at: datetime | None = None\n self._output_task: asyncio.Task | None = None\n self.yolo_mode: bool = False # YOLO mode for rapid prototyping\n\n # Support multiple callbacks (for multiple WebSocket clients)\n self._output_callbacks: Set[Callable[[str], Awaitable[None]]] = set()\n self._status_callbacks: Set[Callable[[str], Awaitable[None]]] = set()","numLines":80,"startLine":1,"totalLines":426}},"sourceToolAssistantUUID":"cd348eb5-20d6-4801-af9c-ccf9eac78a3f"}
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{"parentUuid":"c93d6b19-7a24-45bf-af2c-403831e65993","isSidechain":true,"userType":"external","cwd":"C:\\Users\\MikeSwanson\\claude-projects","sessionId":"ffbb1d55-48d7-4643-9b87-12eb26d1bfa4","version":"2.1.3","gitBranch":"main","agentId":"acec865","slug":"mossy-growing-wreath","message":{"model":"claude-haiku-4-5-20251001","id":"msg_01DgyauuvkLT6hfrQzgP7DUP","type":"message","role":"assistant","content":[{"type":"text","text":"Perfect! Now I have comprehensive information about the Autocoder-2.0 project. Let me create a thorough documentation report.\n\n## Autocoder-2.0 Project - Complete Documentation\n\n### 1. PROJECT OVERVIEW\n\n**Autocoder-2.0** is an autonomous AI coding agent system that leverages Claude's Agent SDK to build complete applications across multiple sessions. It uses a two-agent pattern:\n- **Initializer Agent** (Session 1): Reads app specifications and creates features in a SQLite database\n- **Coding Agent** (Subsequent Sessions): Implements features one by one, marking them passing\n\nThe system includes a React-based web UI for real-time monitoring, REST API backend, and advanced features like YOLO mode for rapid prototyping.\n\n---\n\n### 2. COMPLETE PROJECT STRUCTURE\n\n```\nC:/Users/MikeSwanson/claude-projects/Autocode-remix/Autocoder-2.0/\n├── .claude/ # Claude Code integration\n│ ├── commands/\n│ │ ├── checkpoint.md\n│ │ ├── create-spec.md # /create-spec slash command\n│ │ └── import-spec.md\n│ ├── skills/\n│ │ └── frontend-design/SKILL.md # UI design skill\n│ ├── settings.json\n│ └── templates/ # Prompt templates\n│ ├── app_spec.template.txt\n│ ├── coding_prompt.template.md\n│ ├── coding_prompt_yolo.template.md\n│ └── initializer_prompt.template.md\n├── api/\n│ ├── __init__.py\n│ ├── database.py # SQLAlchemy models (Feature)\n│ └── migration.py\n├── mcp_server/\n│ ├── __init__.py\n│ └── feature_mcp.py # MCP server for feature tools\n├── server/\n│ ├── __init__.py\n│ ├── main.py # FastAPI application entry\n│ ├── websocket.py # WebSocket handler\n│ ├── schemas.py # Pydantic models\n│ ├── routers/\n│ │ ├── __init__.py\n│ │ ├── agent.py # Agent control endpoints\n│ │ ├── assistant_chat.py # Chat assistant endpoints\n│ │ ├── features.py # Feature CRUD endpoints\n│ │ ├── filesystem.py # Filesystem browser API\n│ │ ├── git.py # Git operations API\n│ │ ├── projects.py # Project management CRUD\n│ │ ├── scheduler.py # Task scheduling API\n│ │ ├── spec_creation.py # Spec creation WebSocket\n│ │ └── terminal.py # Terminal session API\n│ └── services/\n│ ├── __init__.py\n│ ├── assistant_chat_session.py # Chat session management\n│ ├── assistant_database.py # Chat history persistence\n│ ├── credential_resolver.py # Credential management\n│ ├── feature_graph.py # Feature dependency analysis\n│ ├── file_lock.py # Distributed file locking\n│ ├── git_operations.py # Git command wrappers\n│ ├── process_manager.py # Agent subprocess lifecycle\n│ ├── resource_manager.py # Infrastructure resources\n│ ├── smart_scheduler.py # Task scheduling engine\n│ ├── spec_chat_session.py # Spec creation chat state\n│ └── terminal_session.py # Terminal session handling\n├── ui/ # React frontend\n│ ├── src/\n│ │ ├── App.tsx # Main app component\n│ │ ├── main.tsx # React entry point\n│ │ ├── vite-env.d.ts\n│ │ ├── components/ # React components\n│ │ │ ├── AddFeatureForm.tsx\n│ │ │ ├── AgentControl.tsx\n│ │ │ ├── AgentThought.tsx\n│ │ │ ├── AssistantChat.tsx\n│ │ │ ├── AssistantFAB.tsx\n│ │ │ ├── AssistantPanel.tsx\n│ │ │ ├── ChatMessage.tsx\n│ │ │ ├── DebugLogViewer.tsx\n│ │ │ ├── DeleteProjectModal.tsx\n│ │ │ ├── FeatureCard.tsx\n│ │ │ ├── FeatureModal.tsx\n│ │ │ ├── FolderBrowser.tsx\n│ │ │ ├── GitPanel.tsx\n│ │ │ ├── KanbanBoard.tsx\n│ │ │ ├── KanbanColumn.tsx\n│ │ │ ├── NewProjectModal.tsx\n│ │ │ ├── ProgressDashboard.tsx\n│ │ │ ├── ProjectSelector.tsx\n│ │ │ ├── QuestionOptions.tsx\n│ │ │ ├── ReferenceFoldersPanel.tsx\n│ │ │ ├── SetupWizard.tsx\n│ │ │ ├── SpecCreationChat.tsx\n│ │ │ ├── TerminalChat.tsx\n│ │ │ └── TypingIndicator.tsx\n│ │ ├── hooks/\n│ │ │ ├── useFeatureSound.ts\n│ │ │ ├── useCelebration.ts\n│ │ │ ├── useProjects.ts # React Query data fetching\n│ │ │ └── useWebSocket.ts # WebSocket real-time updates\n│ │ ├── lib/\n│ │ │ ├── api.ts # REST API client\n│ │ │ └── types.ts # TypeScript type definitions\n│ │ ├── styles/\n│ │ │ └── globals.css # Tailwind CSS v4 theme\n│ │ └── ...\n│ ├── dist/ # Pre-built production UI\n│ ├── public/ # Static assets\n│ ├── package.json\n│ ├── vite.config.ts\n│ ├── tsconfig.json\n│ └── ...\n├── agent.py # Agent session logic\n├── autonomous_agent_demo.py # CLI entry point for agent\n├── client.py # Claude SDK client factory\n├── config.py # Configuration management\n├── progress.py # Progress tracking utilities\n├── prompts.py # Prompt loading with fallback\n├── registry.py # Cross-platform project registry\n├── security.py # Bash command allowlist\n├── smart_orchestrator.py # Multi-agent orchestration\n├── parallel_agent.py # Parallel agent implementation\n├── start.py # CLI menu launcher\n├── start_ui.py # Web UI server launcher\n├── start.bat / start.sh # Entry point scripts\n├── start_ui.bat / start_ui.sh # Web UI entry scripts\n├── requirements.txt # Python dependencies\n├── CLAUDE.md # Claude Code integration guide\n├── README.md # Project documentation\n├── LICENSE.md # AGPL v3 license\n└── venv/ # Python virtual environment\n```\n\n---\n\n### 3. PYTHON MODULES AND THEIR PURPOSES\n\n#### **Core Entry Points**\n- **`autonomous_agent_demo.py`** - Main CLI entry point for running the agent. Supports project directory (absolute or registered name), model selection, max iterations, and YOLO mode flag.\n- **`start.py`** - Interactive CLI menu for project creation/selection and agent startup.\n- **`start_ui.py`** - FastAPI server launcher that serves the React UI at http://localhost:8888.\n\n#### **Agent Logic**\n- **`agent.py`** - Core agent session loop using Claude Agent SDK. Handles:\n - Sending prompts to Claude\n - Receiving and streaming responses\n - Tool use output handling\n - Session state management\n - Auto-continuation between sessions (3-second delay)\n\n- **`client.py`** - Claude SDK client factory that creates configured clients with:\n - Multi-layered security (sandbox, filesystem restrictions, command allowlist)\n - MCP server registration (Feature tools, Playwright tools)\n - Tool filtering for YOLO mode\n - Model selection\n\n- **`security.py`** - Bash command validation with allowlist approach. Defines `ALLOWED_COMMANDS` including:\n - File operations: ls, cat, cp, mkdir, rm, chmod, etc.\n - Development tools: npm, python, cargo, docker\n - Version control: git, gh\n - Network: curl, wget, ping, ssh, scp\n - Process management: ps, lsof, kill, pkill\n\n#### **Configuration & Persistence**\n- **`config.py`** - Centralized configuration management. Loads from `~/.autocoder/config.json` with dataclass-based structure for:\n - Git agent config (auto-commit, auto-push, commit style)\n - Parallel config (max agents, lock timeouts)\n - Security config (sandbox, allowed hosts)\n - Paths config (credentials, resources, logs)\n - UI config (theme, sounds, celebrations)\n\n- **`registry.py`** - Cross-platform project registry using SQLite at `~/.autocoder/registry.db`. Stores:\n - Project name → absolute path mappings (POSIX format for cross-platform compatibility)\n - Reference folders linked to projects (for codebase references)\n - Created timestamps for audit trails\n - Uses SQLAlchemy ORM for database abstraction\n\n#### **Utilities**\n- **`prompts.py`** - Prompt template loading with fallback chain:\n 1. Project-specific: `{project_dir}/prompts/{name}.md`\n 2. Base template: `.claude/templates/{name}.template.md`\n - Supports prompt context injection (infrastructure, credentials)\n\n- **`progress.py`** - Progress tracking and reporting:\n - Database queries for feature statistics\n - N8N webhook notifications on test progress\n - Progress summary display\n\n- **`smart_orchestrator.py`** - Multi-agent orchestration engine\n\n- **`parallel_agent.py`** - Parallel agent implementation for concurrent feature development\n\n#### **API & Database**\n- **`api/database.py`** - SQLAlchemy ORM models:\n - `Feature` table with columns: id, priority, category, name, description, steps (JSON), passes (boolean), in_progress (boolean)\n - Cross-platform SQLite URL generation\n - Schema migration for backward compatibility\n\n- **`api/migration.py`** - Database schema migrations\n\n---\n\n### 4. SERVER API ENDPOINTS (from server/routers/)\n\n#### **Agent Router** (`server/routers/agent.py`)\n- `GET /api/projects/{project_name}/agent/status` - Get agent status (running/paused/stopped/crashed)\n- `POST /api/projects/{project_name}/agent/start` - Start agent (with optional YOLO mode)\n- `POST /api/projects/{project_name}/agent/stop` - Stop agent\n- `POST /api/projects/{project_name}/agent/pause` - Pause agent\n- `POST /api/projects/{project_name}/agent/resume` - Resume paused agent\n\n#### **Projects Router** (`server/routers/projects.py`)\n- `GET /api/projects` - List all registered projects\n- `POST /api/projects` - Create new project\n- `GET /api/projects/{project_name}` - Get project details\n- `PUT /api/projects/{project_name}` - Update project\n- `DELETE /api/projects/{project_name}` - Delete project\n- `GET /api/projects/{project_name}/prompts` - Get project prompts (app_spec, initializer, coding)\n- `PUT /api/projects/{project_name}/prompts` - Update prompts\n- `POST /api/projects/import` - Import existing project\n- `POST /api/projects/{project_name}/analyze` - Analyze codebase\n\n#### **Features Router** (`server/routers/features.py`)\n- `GET /api/projects/{project_name}/features` - List all features (grouped by status: pending, in_progress, done)\n- `POST /api/projects/{project_name}/features` - Create new feature manually\n- `GET /api/projects/{project_name}/features/{feature_id}` - Get feature details\n- `DELETE /api/projects/{project_name}/features/{feature_id}` - Delete feature\n- `PATCH /api/projects/{project_name}/features/{feature_id}/skip` - Move feature to end of queue\n\n#### **Spec Creation Router** (`server/routers/spec_creation.py`)\n- WebSocket: `/ws/spec-creation/{conversation_id}` - Interactive spec creation chat with Claude\n\n#### **Filesystem Router** (`server/routers/filesystem.py`)\n- `GET /api/filesystem/list` - List directory contents (server-side)\n- `GET /api/filesystem/exists` - Check if path exists\n- `GET /api/filesystem/read` - Read file contents\n- `GET /api/filesystem/tree` - Get directory tree\n\n#### **Terminal Router** (`server/routers/terminal.py`)\n- WebSocket: `/ws/terminal/{project_name}` - Interactive terminal session\n\n#### **Git Router** (`server/routers/git.py`)\n- `GET /api/projects/{project_name}/git/status` - Git status\n- `GET /api/projects/{project_name}/git/log` - Git commit history\n- `POST /api/projects/{project_name}/git/commit` - Create commit\n- `POST /api/projects/{project_name}/git/push` - Push changes\n- `GET /api/projects/{project_name}/git/branches` - List branches\n\n#### **Scheduler Router** (`server/routers/scheduler.py`)\n- Task scheduling endpoints for automated operations\n\n#### **Assistant Chat Router** (`server/routers/assistant_chat.py`)\n- WebSocket: `/ws/chat/{conversation_id}` - Multi-turn conversation with Claude Assistant\n\n#### **WebSocket Handler** (`server/websocket.py`)\n- `GET /ws/projects/{project_name}` - Real-time agent updates:\n - `progress` - Feature statistics (passing/total)\n - `agent_status` - Agent state changes\n - `log` - Agent output streaming\n - `feature_update` - Feature status changes\n\n---\n\n### 5. UI COMPONENTS (from ui/src/components/)\n\n#### **Core Components**\n- **`App.tsx`** - Main app wrapper with:\n - Project selection state\n - Keyboard shortcuts (Ctrl+1 through Ctrl+4 for panels)\n - WebSocket connection management\n - Feature celebration on completion\n\n- **`ProjectSelector.tsx`** - Project selection dropdown with load states\n\n- **`KanbanBoard.tsx`** & **`KanbanColumn.tsx`** - Kanban view of features grouped by status\n\n#### **Agent Control**\n- **`AgentControl.tsx`** - Start/stop/pause/resume buttons with YOLO mode toggle\n- **`AgentThought.tsx`** - Display agent reasoning/thoughts in real-time\n\n#### **Feature Management**\n- **`FeatureCard.tsx`** - Individual feature display (name, category, status)\n- **`FeatureModal.tsx`** - Detailed feature view with steps\n- **`AddFeatureForm.tsx`** - Manual feature creation form\n\n#### **Project Creation**\n- **`NewProjectModal.tsx`** - Multi-step project creation wizard:\n - Step 1: Basic info (name, type)\n - Step 2: Specification method (Claude-assisted or manual)\n - Step 3: Folder selection\n - Step 4: Spec generation/entry\n\n- **`FolderBrowser.tsx`** - Server-side filesystem browser for selecting project location\n\n- **`SetupWizard.tsx`** - Initial setup flow\n\n#### **Advanced Features**\n- **`SpecCreationChat.tsx`** - Interactive chat with Claude for generating app specs\n- **`TerminalChat.tsx`** - Terminal emulation with command execution\n- **`GitPanel.tsx`** - Git operations UI (status, commit, push, branches)\n- **`ReferenceFoldersPanel.tsx`** - Link and manage code reference folders\n- **`AssistantChat.tsx`** & **`AssistantPanel.tsx`** - AI assistant chat sidebar\n\n#### **Utilities & UX**\n- **`ProgressDashboard.tsx`** - Feature completion statistics display\n- **`DebugLogViewer.tsx`** - Expandable debug log panel\n- **`ChatMessage.tsx`** - Message rendering in chat interfaces\n- **`QuestionOptions.tsx`** - Multiple choice UI for spec creation\n- **`TypingIndicator.tsx`** - Loading animation\n- **`AssistantFAB.tsx`** - Floating action button for assistant\n- **`DeleteProjectModal.tsx`** - Project deletion confirmation\n\n#### **Styling**\n- **`globals.css`** - Tailwind CSS v4 custom theme with:\n - CSS variables for colors (neo-pending: yellow, neo-progress: cyan, neo-done: green)\n - Custom animations: `animate-slide-in`, `animate-pulse-neo`, `animate-shimmer`\n - Neobrutalism design system\n\n---\n\n### 6. DATABASE SCHEMA (from api/database.py)\n\n#### **Feature Table**\n```\nTABLE: features\n├── id (Integer, PK, autoincrement)\n├── priority (Integer, indexed, default=999)\n├── category (String(100), required)\n│ └── Examples: \"functional\", \"style\", \"performance\", \"security\"\n├── name (String(255), required)\n├── description (Text, required)\n├── steps (JSON array, required)\n│ └── Each element: implementation/test step as string\n├── passes (Boolean, indexed, default=False)\n│ └── Indicates feature is complete and verified\n└── in_progress (Boolean, indexed, default=False)\n └── Indicates feature is currently being worked on\n```\n\n#### **Key Relationships**\n- One-to-many: Project → Features\n- Features are ordered by priority (ascending) within a project\n- `passes=True` features are considered \"done\"\n- `in_progress=True` prevents concurrent work on same feature\n\n---\n\n### 7. MCP SERVER TOOLS (from mcp_server/feature_mcp.py)\n\n#### **Feature Management Tools**\n\n**`feature_get_stats()`**\n- Returns: JSON with `{passing, in_progress, total, percentage}`\n- Use: Track overall progress\n\n**`feature_get_next()`**\n- Returns: Next highest-priority pending feature (passes=false, ordered by priority)\n- Use: Determine what to work on next\n\n**`feature_get_for_regression(limit=3)`**\n- Returns: Random passing features for regression testing\n- Args: limit (1-10, default 3)\n- Use: Verify previously implemented features still work\n\n**`feature_mark_passing(feature_id)`**\n- Updates: Sets passes=true, clears in_progress flag\n- Returns: Updated feature details\n- Use: Mark feature complete after verification\n\n**`feature_skip(feature_id)`**\n- Updates: Moves feature to end of priority queue (priority = max+1)\n- Returns: Skip details (id, name, old_priority, new_priority)\n- Use: Defer feature due to dependencies or blockers\n\n**`feature_mark_in_progress(feature_id)`**\n- Updates: Sets in_progress=true\n- Returns: Updated feature details\n- Use: Claim a feature to prevent concurrent work\n\n**`feature_clear_in_progress(feature_id)`**\n- Updates: Sets in_progress=false\n- Returns: Updated feature details\n- Use: Unstick stuck features or abandon work\n\n**`feature_create_bulk(features)`**\n- Args: List of feature dicts {category, name, description, steps}\n- Returns: {created: count}\n- Use: Initializer agent creates all features from app spec\n\n---\n\n### 8. PROMPT TEMPLATES (from .claude/templates/)\n\n#### **`initializer_prompt.template.md`**\n- **Purpose**: First session setup\n- **Key Sections**:\n - Role definition as Initializer Agent\n - Read app_spec.txt for requirements\n - Create exactly [FEATURE_COUNT] features using feature_create_bulk\n - Feature requirements: mix of functional/style, narrow/comprehensive tests\n - Mandatory test categories (20 categories required)\n - Feature generation guidelines\n - Setup project structure\n\n#### **`coding_prompt.template.md`**\n- **Purpose**: Continuation sessions for feature implementation\n- **Key Sections**:\n - Get bearings: pwd, ls, read app_spec.txt, claude-progress.txt, git log\n - Start servers from init.sh\n - Regression testing: verify 1-2 core features before new work\n - Feature workflow:\n - Get next feature (feature_get_next)\n - Mark in-progress (feature_mark_in_progress)\n - Implement and test\n - Verify with Playwright/browser testing\n - Mark passing (feature_mark_passing)\n - Handle failures: fix immediately before moving to new features\n - Regression testing: periodically run feature_get_for_regression\n\n#### **`coding_prompt_yolo.template.md`**\n- **Purpose**: Rapid prototyping mode (no browser testing)\n- **Key Differences**:\n - Skip Playwright tools (no browser automation)\n - Skip regression testing (feature_get_for_regression)\n - Features marked passing after lint/type-check only\n - Focus on code scaffolding speed\n\n#### **`app_spec.template.txt`**\n- **Purpose**: XML template for application specifications\n- **Sections**:\n - Project metadata (name, description, tech stack)\n - Detailed requirements\n - Feature list (structured for parser)\n - Success criteria\n\n---\n\n### 9. CONFIGURATION OPTIONS (from config.py)\n\n#### **GitAgentConfig**\n```python\nauto_commit: bool = True\nauto_push: bool = False\ncommit_style: str = \"conventional\" # \"conventional\", \"simple\", \"detailed\"\npush_on: list[str] = [\"feature_complete\", \"session_end\"]\npull_before: list[str] = [\"code_review\", \"feature_start\"]\n```\n\n#### **ParallelConfig**\n```python\nenabled: bool = True\nmax_agents: int = 3\nlock_timeout_seconds: int = 3600\n```\n\n#### **SecurityConfig**\n```python\nsandbox_enabled: bool = False # Disabled for full system access\nallowed_hosts: list[str] = [] # Empty = all allowed\n```\n\n#### **PathsConfig**\n```python\ncredentials_path: str = \"~/claude-projects/shared-data/credentials.md\"\nglobal_resources_path: str = \"~/.autocoder/global_resources.json\"\nsession_logs_path: str = \"~/claude-projects/session-logs\"\n```\n\n#### **UIConfig**\n```python\ntheme: str = \"neobrutalism\"\nshow_agent_thoughts: bool = True\nsound_enabled: bool = True\ncelebration_enabled: bool = True\n```\n\n#### **AutocoderConfig (Main)**\n```python\nversion: str = \"2.0.0\"\ndefault_model: str = \"claude-sonnet-4-20250514\"\ngit_agent: GitAgentConfig\nparallel: ParallelConfig\nsecurity: SecurityConfig\npaths: PathsConfig\nui: UIConfig\n```\n\n**Location**: `~/.autocoder/config.json` (auto-created on first run)\n\n---\n\n### 10. ADDITIONAL KEY SERVICES\n\n#### **Process Manager** (`server/services/process_manager.py`)\n- Manages agent subprocess lifecycle per project\n- Supports start/stop/pause/resume with cross-platform psutil\n- Streams subprocess output to WebSocket clients\n- Output sanitization: redacts API keys, tokens, passwords\n- Status tracking: stopped, running, paused, crashed\n- Health checks to detect crashed processes\n\n#### **Credential Resolver** (`server/services/credential_resolver.py`)\n- Loads credentials from `shared-data/credentials.md`\n- Provides redacted credentials to agents\n- Supports service-specific lookups\n\n#### **Feature Graph** (`server/services/feature_graph.py`)\n- Analyzes feature dependencies\n- Detects circular dependencies\n- Topological sorting for optimal feature order\n\n#### **File Lock** (`server/services/file_lock.py`)\n- Distributed file locking with timeout\n- Prevents concurrent agent modification\n- Cross-platform support\n\n#### **Git Operations** (`server/services/git_operations.py`)\n- Wraps git commands\n- Commit/push automation\n- Branch management\n- History tracking\n\n#### **Resource Manager** (`server/services/resource_manager.py`)\n- Infrastructure resource tracking\n- Server registry (Jupiter, Saturn, pfSense, Build Server)\n- Service endpoints (Gitea, NPM, GuruRMM API)\n\n#### **Smart Scheduler** (`server/services/smart_scheduler.py`)\n- Task scheduling engine\n- Cron-like scheduling\n- Priority-based execution\n\n#### **Spec Chat Session** (`server/services/spec_chat_session.py`)\n- Manages multi-turn conversation for spec generation\n- Context preservation across turns\n\n#### **Assistant Chat Session** (`server/services/assistant_chat_session.py`)\n- Multi-turn conversation state\n- History persistence to SQLite\n\n#### **Terminal Session** (`server/services/terminal_session.py`)\n- Interactive terminal emulation\n- Command execution in project directory\n\n---\n\n### 11. TECHNOLOGY STACK\n\n#### **Backend**\n- **Python 3.x** with virtual environment\n- **FastAPI** - REST API framework\n- **SQLAlchemy** - ORM for database\n- **SQLite** - Lightweight database\n- **Claude Agent SDK** - Claude API integration\n- **psutil** - Cross-platform process management\n- **Pydantic** - Data validation\n\n#### **Frontend**\n- **React 18** - UI framework\n- **TypeScript** - Type-safe development\n- **Vite** - Build tooling\n- **Tailwind CSS v4** - Utility-first styling\n- **Radix UI** - Accessible components\n- **TanStack Query** - Data fetching/caching\n- **Lucide React** - Icon library\n- **React Markdown** - Markdown rendering\n- **Canvas Confetti** - Celebration animations\n\n#### **Security**\n- Defense-in-depth: OS-level sandbox + filesystem restrictions + command allowlist\n- Cross-origin restrictions (localhost only)\n- Sensitive data redaction in process output\n- CORS middleware for localhost\n\n---\n\n### 12. KEY WORKFLOWS\n\n#### **Initializer Agent Workflow (Session 1)**\n1. Read `app_spec.txt`\n2. Create features using `feature_create_bulk` (exact count)\n3. Initialize git repository\n4. Scaffold project structure\n5. Create prompt files for future sessions\n\n#### **Coding Agent Workflow (Sessions 2+)**\n1. Get bearings: read spec, progress notes, git history\n2. Start required servers (if not running)\n3. Regression test: verify 1-2 core features\n4. Loop until no features remaining:\n - `feature_get_next()` - Get next feature\n - `feature_mark_in_progress(id)` - Claim it\n - Implement feature\n - Test with browser automation (Playwright)\n - `feature_mark_passing(id)` or `feature_skip(id)`\n5. Auto-continue with 3-second delay\n\n#### **YOLO Mode Workflow**\n- Skip browser testing\n- Skip regression testing\n- Mark features passing after lint/type-check\n- Faster iteration for prototyping\n\n#### **Project Creation Workflow (UI)**\n1. Enter project name and type\n2. Choose spec method: Claude-assisted or manual\n3. Select project folder location\n4. Generate/enter specification\n5. Create project in registry\n6. Initialize `features.db`\n\n---\n\n### 13. KEY FILES AND THEIR LOCATIONS\n\n| Component | File Path |\n|-----------|-----------|\n| Agent Logic | `agent.py` |\n| CLI Launcher | `start.py` |\n| UI Server | `start_ui.py` |\n| SDK Client | `client.py` |\n| Security | `security.py` |\n| Database Models | `api/database.py` |\n| MCP Tools | `mcp_server/feature_mcp.py` |\n| FastAPI App | `server/main.py` |\n| WebSocket Handler | `server/websocket.py` |\n| Agent Router | `server/routers/agent.py` |\n| Features Router | `server/routers/features.py` |\n| Projects Router | `server/routers/projects.py` |\n| Process Manager | `server/services/process_manager.py` |\n| Registry | `registry.py` |\n| Config | `config.py` |\n| React App | `ui/src/App.tsx` |\n| Tailwind Theme | `ui/src/styles/globals.css` |\n| Package.json | `ui/package.json` |\n| Init Templates | `.claude/templates/` |\n\n---\n\n### 14. ENVIRONMENT & DEPENDENCIES\n\n**Python Requirements** (from `requirements.txt`):\n- Claude Agent SDK\n- FastAPI + Uvicorn\n- SQLAlchemy\n- Pydantic\n- psutil\n- python-dotenv\n\n**Node.js Dependencies** (from `ui/package.json`):\n- React 18.3.1\n- TypeScript 5.6.2\n- Tailwind CSS 4.0.0\n- Vite 5.4.10\n- TanStack Query 5.60.0\n- Radix UI components\n- Lucide React icons\n\n**Configuration Files**:\n- `~/.autocoder/registry.db` - Project registry (auto-created)\n- `~/.autocoder/config.json` - Configuration (auto-created)\n- `.env` - Optional environment variables (N8N webhook, etc.)\n\n---\n\nThis comprehensive documentation covers the complete Autocoder-2.0 system including all modules, endpoints, components, database schema, MCP tools, configuration options, and key workflows. The system is designed for autonomous, long-running AI-powered development with safety-first design principles and cross-platform support."}],"stop_reason":null,"stop_sequence":null,"usage":{"input_tokens":2,"cache_creation_input_tokens":2125,"cache_read_input_tokens":61525,"cache_creation":{"ephemeral_5m_input_tokens":2125,"ephemeral_1h_input_tokens":0},"output_tokens":7460,"service_tier":"standard"}},"requestId":"req_011CX1pid3evQh26166PUo6M","type":"assistant","uuid":"1e65048c-7be1-4284-918d-1bed51bcfc26","timestamp":"2026-01-11T15:26:30.828Z"}
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