Reorganized project structure for better maintainability and reduced disk usage by 95.9% (11 GB -> 451 MB). Directory Reorganization (85% reduction in root files): - Created docs/ with subdirectories (deployment, testing, database, etc.) - Created infrastructure/vpn-configs/ for VPN scripts - Moved 90+ files from root to organized locations - Archived obsolete documentation (context system, offline mode, zombie debugging) - Moved all test files to tests/ directory - Root directory: 119 files -> 18 files Disk Cleanup (10.55 GB recovered): - Deleted Rust build artifacts: 9.6 GB (target/ directories) - Deleted Python virtual environments: 161 MB (venv/ directories) - Deleted Python cache: 50 KB (__pycache__/) New Structure: - docs/ - All documentation organized by category - docs/archives/ - Obsolete but preserved documentation - infrastructure/ - VPN configs and SSH setup - tests/ - All test files consolidated - logs/ - Ready for future logs Benefits: - Cleaner root directory (18 vs 119 files) - Logical organization of documentation - 95.9% disk space reduction - Faster navigation and discovery - Better portability (build artifacts excluded) Build artifacts can be regenerated: - Rust: cargo build --release (5-15 min per project) - Python: pip install -r requirements.txt (2-3 min) Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>
ClaudeTools Scripts
Utility scripts for managing the ClaudeTools system.
Core Scripts
Context Recall System
setup-context-recall.sh
- One-time setup for context recall system
- Configures JWT authentication
- Tests API connectivity
test-context-recall.sh
- Verify context recall system functionality
- Test API endpoints
- Check compression
Conversation Import & Archive
import-conversations.py
- Import conversation JSONL files to database
- Extract and compress conversation context
- Tag extraction and categorization
- Optional tombstone creation with
--create-tombstones
archive-imported-conversations.py
- Archive imported conversation files
- Create tombstone markers
- Move files to archived/ subdirectories
- Database verification (optional)
check-tombstones.py
- Verify tombstone integrity
- Validate JSON structure
- Check archived files exist
- Database context verification
TOMBSTONE_QUICK_START.md
- Quick reference for tombstone system
- Common commands
- Troubleshooting tips
Database & Testing
test_db_connection.py
- Test database connectivity
- Verify credentials
- Check table access
test-server.sh
- Start development server
- Run basic API tests
MCP Servers
setup-mcp-servers.sh
- Configure Model Context Protocol servers
- Setup GitHub, Filesystem, Sequential Thinking
Tombstone System (NEW)
Archive imported conversation files with small marker files.
Quick Start
# Archive all imported files
python scripts/archive-imported-conversations.py --skip-verification
# Verify tombstones
python scripts/check-tombstones.py
# Check space savings
du -sh imported-conversations/
Documentation
TOMBSTONE_QUICK_START.md- Quick reference../TOMBSTONE_SYSTEM.md- Complete documentation../TOMBSTONE_IMPLEMENTATION_SUMMARY.md- Implementation details
Expected Results
- 549 tombstone files (~1 MB)
- 549 archived files in subdirectories
- 99%+ space reduction in active directory
Usage Patterns
Initial Setup
# 1. Setup context recall
bash scripts/setup-context-recall.sh
# 2. Setup MCP servers (optional)
bash scripts/setup-mcp-servers.sh
# 3. Test database connection
python scripts/test_db_connection.py
Import Conversations
# Import with automatic tombstones
python scripts/import-conversations.py --create-tombstones
# Or import first, archive later
python scripts/import-conversations.py
python scripts/archive-imported-conversations.py --skip-verification
Verify System
# Test context recall
bash scripts/test-context-recall.sh
# Check tombstones
python scripts/check-tombstones.py
# Test API
bash scripts/test-server.sh
Script Categories
Setup & Configuration
setup-context-recall.shsetup-mcp-servers.sh
Import & Archive
import-conversations.pyarchive-imported-conversations.pycheck-tombstones.py
Testing & Verification
test_db_connection.pytest-context-recall.shtest-server.shtest-tombstone-system.sh
Utilities
- Various helper scripts
Common Commands
# Start API server
uvicorn api.main:app --reload
# Import conversations
python scripts/import-conversations.py
# Archive files
python scripts/archive-imported-conversations.py --skip-verification
# Check system health
python scripts/check-tombstones.py
bash scripts/test-context-recall.sh
# Database connection test
python scripts/test_db_connection.py
Requirements
Most scripts require:
- Python 3.8+
- Virtual environment activated (
api\venv\Scripts\activate) .envfile configured (see.env.example)- Database access (172.16.3.30:3306)
Environment Variables
Scripts use these from .env:
DATABASE_URL=mysql+pymysql://user:pass@172.16.3.30:3306/claudetools
JWT_TOKEN=your-jwt-token-here
API_USER_EMAIL=user@example.com
API_USER_PASSWORD=your-password
Documentation
TOMBSTONE_QUICK_START.md- Tombstone system quick start../TOMBSTONE_SYSTEM.md- Complete tombstone documentation../.claude/CONTEXT_RECALL_QUICK_START.md- Context recall guide../CONTEXT_RECALL_SETUP.md- Full setup instructions
Last Updated: 2026-01-18 Version: 1.0